Contacts of the helix formed by residues 20 - 119 (chain A) in PDB entry 2BOT
Residue contacts within the protein are
derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332). A
short description of the analytical approach
is given at the end of the page.
Note:
Non-standard 3 letter residue
codes indicate a heterogroup. To identify
and analyse, use LPC software
Legend:
Dist - nearest distance (Å) between atoms of two residues
Surf - contact surface area (Å2) between two residues
HB - hydrophilic-hydrophilic contact (hydrogen bond)
Arom - aromatic-aromatic contact
Phob - hydrophobic-hydrophobic contact
DC - hydrophobic-hydrophilic contact (destabilizing contact)
+/- - indicates presence/absence of a specific contacts
* - indicates residues forming contacts by their side chain
(including CA atoms)
Residues in contact with GLN 20 (chain A).
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
21A GLN* 1.3 64.9 + - + +
22A MET* 3.5 8.4 - - - +
23A HIS* 3.2 29.6 - - + +
24A LEU* 2.8 34.3 + - + +
99B PHE* 3.4 33.6 - - + -
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Residues in contact with GLN 21 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
20A GLN* 1.3 79.5 - - + +
22A MET* 1.3 55.9 + - + +
23A HIS 3.1 1.1 - - - -
24A LEU* 3.5 8.2 - - + +
25A ASN* 2.7 51.0 + - - +
96B SER* 5.7 1.6 - - - -
99B PHE* 2.8 60.9 + - + +
100B LYS* 3.1 20.3 - - + +
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Residues in contact with MET 22 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
20A GLN 4.4 6.4 - - - +
21A GLN* 1.3 76.4 - - + +
23A HIS* 1.3 65.5 + - + +
25A ASN* 3.4 9.8 + - - +
26A VAL* 3.0 37.7 + - + +
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Residues in contact with HIS 23 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
20A GLN* 3.2 30.2 + - + +
21A GLN 3.1 0.2 - - - -
22A MET* 1.3 85.8 - - + +
24A LEU* 1.3 61.0 + - + +
26A VAL* 3.3 6.3 + - - +
27A GLY* 3.0 26.9 + - - -
92B TRP* 5.6 1.5 - - - -
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Residues in contact with LEU 24 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
20A GLN* 2.8 27.3 + - + +
21A GLN* 3.1 7.2 + - - +
23A HIS* 1.3 74.9 - - + +
25A ASN* 1.3 56.7 + - - +
27A GLY* 3.4 1.4 + - - -
28A LEU* 2.8 36.9 + - - +
92B TRP* 3.6 39.6 - - + +
95B THR* 3.3 30.7 - - + -
96B SER* 4.2 15.9 - - - +
99B PHE* 3.4 32.3 - - + -
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Residues in contact with ASN 25 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
21A GLN* 2.7 39.7 + - - +
22A MET* 3.8 9.2 - - - +
24A LEU* 1.3 69.8 - - - +
26A VAL* 1.3 60.6 + - + +
28A LEU* 3.2 17.2 + - - +
29A ARG* 3.0 45.8 + - - +
96B SER* 4.6 3.1 - - - -
100B LYS* 3.8 27.9 + - - +
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Residues in contact with VAL 26 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
22A MET* 3.0 21.1 + - + +
23A HIS* 3.3 6.3 + - - +
25A ASN* 1.3 77.0 - - + +
27A GLY* 1.3 62.9 + - - +
29A ARG* 3.1 13.8 + - - +
30A LYS* 3.0 54.9 + - + +
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Residues in contact with GLY 27 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
23A HIS 3.0 14.8 + - - -
24A LEU* 3.7 3.8 - - - -
26A VAL* 1.3 75.9 - - - +
28A LEU* 1.3 51.3 + - - +
30A LYS* 3.3 8.8 + - - +
31A ILE* 2.8 48.3 + - - +
92B TRP* 5.4 9.2 - - - -
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Residues in contact with LEU 28 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
24A LEU 2.8 27.5 + - - +
25A ASN* 3.3 16.4 - - - +
26A VAL 3.2 0.2 - - - -
27A GLY* 1.3 75.4 - - - +
29A ARG* 1.3 52.0 + - + +
31A ILE* 3.1 7.6 + - + +
32A LYS* 2.8 55.3 + - + +
89B ARG* 4.2 4.9 - - + +
92B TRP* 3.1 35.7 - - + +
93B GLU* 3.8 21.3 - - + +
96B SER* 4.0 29.6 - - - +
100B LYS* 6.1 0.7 - - - +
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Residues in contact with ARG 29 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
25A ASN* 3.0 30.1 + - - +
26A VAL* 3.6 11.9 - - + +
28A LEU* 1.3 75.8 - - + +
30A LYS* 1.3 54.4 + - + +
32A LYS* 3.2 9.8 + - + +
33A GLU* 2.8 52.1 + - + +
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Residues in contact with LYS 30 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
26A VAL* 3.0 36.3 + - + +
27A GLY* 3.6 9.2 - - - +
29A ARG* 1.3 73.4 - - + +
31A ILE* 1.3 72.4 + - + +
33A GLU* 3.2 11.2 + - - +
34A THR* 2.9 27.4 + - - +
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Residues in contact with ILE 31 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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27A GLY* 2.8 33.9 + - - +
28A LEU* 3.7 6.5 - - - +
30A LYS* 1.3 81.0 - - + +
32A LYS* 1.4 51.7 - - - +
34A THR* 2.9 15.0 + - - -
35A VAL 3.0 4.2 + - - -
85B LEU* 3.5 30.5 - - + +
88B GLU* 4.4 8.1 - - + +
89B ARG* 2.5 50.8 + - + +
92B TRP* 3.0 49.8 - - + +
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Residues in contact with LYS 32 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
28A LEU* 2.8 38.6 + - + +
29A ARG* 3.5 8.7 - - + +
31A ILE* 1.4 65.4 - - - +
33A GLU* 1.3 54.9 + - + +
36A ASP* 2.7 35.4 + - - +
89B ARG* 2.7 38.4 + - + +
93B GLU* 4.0 24.5 + - - +
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Residues in contact with GLU 33 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
29A ARG* 2.8 32.1 + - - +
30A LYS* 3.2 10.1 + - - +
32A LYS* 1.3 76.9 - - + +
34A THR* 1.3 57.5 + - - +
36A ASP* 3.3 9.1 + - - +
37A GLN* 3.0 47.4 + - - +
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Residues in contact with THR 34 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
30A LYS* 2.9 14.4 + - - +
31A ILE* 2.9 12.4 + - - -
33A GLU* 1.3 75.6 - - - +
35A VAL* 1.3 55.8 + - - -
37A GLN* 3.3 13.3 + - - +
38A VAL* 2.8 40.5 + - + +
85B LEU* 3.5 28.9 - - + -
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Residues in contact with VAL 35 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
31A ILE 3.0 2.4 + - - +
34A THR* 1.3 67.8 - - - +
36A ASP* 1.3 58.2 + - - +
39A GLU* 2.8 69.0 + - + +
82B LEU* 3.8 15.0 - - + +
85B LEU* 3.1 42.4 - - + -
86B SER* 4.1 7.6 - - - +
89B ARG* 2.6 50.6 - - - +
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Residues in contact with ASP 36 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
32A LYS* 2.7 31.2 + - - +
33A GLU* 3.3 8.9 + - - +
35A VAL* 1.3 76.9 - - - +
37A GLN* 1.3 64.1 + - + +
39A GLU* 3.4 10.9 + - - +
40A GLU* 3.2 33.7 + - - +
89B ARG* 3.9 9.9 + - - -
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Residues in contact with GLN 37 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
33A GLU* 3.0 36.9 + - - +
34A THR* 3.5 12.7 + - - +
36A ASP* 1.3 77.4 - - + +
38A VAL* 1.3 59.8 + - + +
40A GLU* 3.2 13.4 + - - +
41A LEU* 3.0 37.7 + - + +
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Residues in contact with VAL 38 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
34A THR* 2.8 40.0 + - + +
37A GLN* 1.3 73.7 - - + +
39A GLU* 1.3 56.5 + - - +
41A LEU* 3.2 17.1 + - + +
42A ARG* 2.8 56.6 + - + +
78B SER* 4.3 12.3 - - - +
81B LEU* 5.0 9.2 - - + -
82B LEU* 3.3 24.5 - - + +
85B LEU* 4.2 6.3 - - + -
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Residues in contact with GLU 39 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
35A VAL* 2.8 48.1 + - - +
36A ASP* 3.8 9.5 - - - +
38A VAL* 1.3 75.0 - - - +
40A GLU* 1.3 58.3 + - + +
42A ARG* 4.0 2.5 - - - +
43A ARG* 3.0 51.5 + - - +
82B LEU* 3.5 27.5 - - + +
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Residues in contact with GLU 40 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
36A ASP* 3.2 22.4 - - - +
37A GLN* 3.2 10.3 + - - +
39A GLU* 1.3 75.6 - - + +
41A LEU* 1.3 59.5 + - + +
43A ARG* 3.2 12.9 + - - +
44A ASP* 2.9 42.5 + - - +
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Residues in contact with LEU 41 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
37A GLN* 3.0 26.3 + - + +
38A VAL* 3.5 24.0 - - + +
40A GLU* 1.3 78.7 - - + +
42A ARG* 1.3 52.1 + - + +
44A ASP* 3.3 12.6 + - + +
45A LEU* 2.7 47.1 + - + +
78B SER* 5.9 1.3 - - - -
----------------------------------------------------------
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Residues in contact with ARG 42 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
38A VAL* 2.8 22.7 + - - +
39A GLU* 4.0 5.4 - - - +
41A LEU* 1.3 74.7 - - - +
43A ARG* 1.3 55.0 + - + +
45A LEU* 3.6 7.5 - - - +
46A ARG* 2.8 57.7 + - + +
75B VAL* 5.5 3.5 - - + +
78B SER* 2.5 49.7 + - - +
79B THR* 2.8 44.4 + - - +
82B LEU* 2.4 68.1 - - + +
83B LYS* 4.5 1.4 - - - +
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Residues in contact with ARG 43 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
39A GLU* 3.0 40.5 + - - +
40A GLU* 3.5 11.3 - - - +
42A ARG* 1.3 74.2 - - + +
44A ASP* 1.3 62.1 + - - +
46A ARG* 3.4 13.1 + - - +
47A ILE* 2.9 41.5 + - + +
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Residues in contact with ASP 44 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
40A GLU* 2.9 27.2 + - - +
41A LEU* 3.4 15.5 - - + +
43A ARG* 1.3 78.5 - - - +
45A LEU* 1.3 62.1 + - + +
47A ILE* 3.3 14.0 + - - +
48A LYS* 3.0 45.9 + - - +
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Residues in contact with LEU 45 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
41A LEU* 2.7 30.9 + - + +
42A ARG* 3.8 4.7 - - - +
44A ASP* 1.3 75.1 - - + +
46A ARG* 1.3 56.5 - - - +
48A LYS* 3.5 15.1 + - + +
49A SER* 2.9 30.8 + - - -
71B VAL* 3.5 16.4 - - + +
74B LYS* 3.8 46.2 - - + +
75B VAL* 3.6 17.3 - - + +
78B SER* 4.2 14.6 - - - +
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Residues in contact with ARG 46 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
42A ARG* 2.8 44.5 + - - +
43A ARG* 3.6 12.0 - - - +
45A LEU* 1.3 70.0 - - - +
47A ILE* 1.3 65.2 + - + +
49A SER* 2.7 22.5 + - - -
50A GLN* 3.1 25.5 + - - +
75B VAL* 5.0 16.2 - - + +
79B THR* 4.8 14.1 + - - +
82B LEU* 6.2 0.6 - - - +
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Residues in contact with ILE 47 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
43A ARG* 2.9 30.2 + - + +
44A ASP* 3.8 13.0 - - - +
46A ARG* 1.3 74.1 - - + +
48A LYS* 1.3 66.2 + - + +
50A GLN* 3.3 13.2 + - - +
51A GLU* 3.1 47.1 + - + +
----------------------------------------------------------
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Residues in contact with LYS 48 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
44A ASP* 3.0 31.2 + - - +
45A LEU* 3.8 15.6 - - + +
47A ILE* 1.3 76.3 - - + +
49A SER* 1.3 57.5 + - - +
51A GLU* 3.3 14.0 + - - +
52A LEU* 2.9 42.0 + - + +
71B VAL* 4.9 9.4 - - + -
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Residues in contact with SER 49 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
45A LEU 2.9 14.7 + - - -
46A ARG* 2.7 28.2 + - - +
48A LYS* 1.3 74.1 - - - +
50A GLN* 1.3 53.9 + - - +
52A LEU* 3.1 7.3 + - - +
53A GLU* 2.8 51.7 + - - +
68B LEU* 4.0 3.8 - - - +
71B VAL* 3.9 17.0 - - - +
72B GLU* 5.7 7.0 - - - -
75B VAL* 5.3 4.2 - - - +
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Residues in contact with GLN 50 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
46A ARG* 3.1 26.1 + - - +
47A ILE* 3.7 11.0 - - - +
49A SER* 1.3 82.4 + - - +
51A GLU* 1.3 58.3 + - + +
53A GLU* 3.3 11.4 + - - +
54A VAL* 2.9 39.7 + - + +
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Residues in contact with GLU 51 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
47A ILE* 3.1 34.4 + - + +
48A LYS* 3.6 13.5 - - - +
50A GLN* 1.3 75.5 - - + +
52A LEU* 1.3 59.9 + - + +
54A VAL* 3.2 6.6 + - - +
55A LYS* 2.8 55.4 + - - +
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Residues in contact with LEU 52 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
48A LYS* 2.9 30.2 + - + +
49A SER* 3.1 1.3 + - - +
51A GLU* 1.3 77.4 - - + +
53A GLU* 1.3 49.8 + - - +
55A LYS* 3.0 14.1 + - + +
56A ASN* 2.8 42.8 + - - +
64B ILE* 3.9 18.2 - - + -
67B ASP* 4.0 21.3 - - + +
68B LEU* 3.1 26.9 - - + -
71B VAL* 3.6 32.5 - - + -
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Residues in contact with GLU 53 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
49A SER* 2.8 31.6 + - - +
50A GLN* 3.6 10.4 - - - +
52A LEU* 1.3 74.1 - - - +
54A VAL* 1.3 57.8 + - + +
56A ASN* 3.3 9.6 + - - +
57A ALA* 2.9 30.8 + - - +
68B LEU* 4.1 16.1 - - + +
72B GLU* 4.4 12.7 - - - +
----------------------------------------------------------
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Residues in contact with VAL 54 (chain A).
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----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
50A GLN* 2.9 29.3 + - + +
51A GLU* 3.2 6.0 + - - +
53A GLU* 1.3 72.6 - - + +
55A LYS* 1.3 59.7 + - + +
57A ALA* 3.3 7.2 + - + +
58A ALA* 3.0 30.9 + - + +
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Residues in contact with LYS 55 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
51A GLU* 2.8 41.2 + - - +
52A LEU* 3.5 14.1 - - + +
54A VAL* 1.3 76.8 - - + +
56A ASN* 1.3 57.7 + - - +
58A ALA* 3.4 6.6 + - - +
59A ALA* 2.9 32.2 + - - +
64B ILE* 4.3 16.8 - - + -
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Residues in contact with ASN 56 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
52A LEU 2.8 27.2 + - - +
53A GLU* 3.5 6.1 - - - +
55A LYS* 1.3 69.1 - - - +
57A ALA* 1.3 65.2 + - - +
59A ALA* 3.2 3.7 + - - -
60A ASN* 2.8 42.8 + - - +
61B ALA* 4.4 5.0 - - - +
64B ILE* 2.8 43.8 - - - +
65B LYS* 4.1 7.7 + - + +
68B LEU* 2.9 35.0 - - + +
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Residues in contact with ALA 57 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
53A GLU 2.9 17.8 + - - +
54A VAL* 3.6 7.6 - - + +
56A ASN* 1.3 75.5 - - - +
58A ALA* 1.3 61.9 + - - +
60A ASN* 3.4 5.7 + - - +
61A ASP* 2.9 34.5 + - - +
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Residues in contact with ALA 58 (chain A).
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----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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54A VAL* 3.0 19.4 + - + +
55A LYS* 3.6 7.6 - - - +
57A ALA* 1.3 75.1 - - - +
59A ALA* 1.3 57.1 + - - +
61A ASP* 3.2 10.9 + - - +
62A LYS* 3.0 46.3 + - - +
----------------------------------------------------------
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Residues in contact with ALA 59 (chain A).
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----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
55A LYS 2.9 21.1 + - - +
56A ASN* 3.9 5.2 - - - +
58A ALA* 1.3 72.2 - - - +
60A ASN* 1.3 59.8 + - - +
62A LYS* 3.2 12.6 + - + +
63A LEU* 2.8 41.9 + - + +
57B LEU* 5.2 10.5 - - + +
60B GLU* 5.6 6.1 - - + +
61B ALA* 5.2 5.8 - - + +
64B ILE* 4.8 12.1 - - + -
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Residues in contact with ASN 60 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
56A ASN* 2.8 37.4 + - - +
57A ALA* 3.9 5.4 - - - +
59A ALA* 1.3 76.7 - - - +
61A ASP* 1.3 62.6 + - - +
63A LEU* 3.7 9.3 + - - +
64A LYS* 3.0 44.3 + - - +
61B ALA* 4.2 14.7 - - - +
65B LYS* 4.2 25.5 + - - +
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Residues in contact with ASP 61 (chain A).
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----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
57A ALA* 2.9 22.6 - - - +
58A ALA* 3.2 9.5 + - - +
60A ASN* 1.3 78.4 - - - +
62A LYS* 1.3 59.4 + - + +
64A LYS* 3.2 17.4 + - - +
65A LYS* 2.9 46.5 + - - +
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Residues in contact with LYS 62 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
58A ALA* 3.0 29.9 + - - +
59A ALA* 3.5 11.2 - - + +
61A ASP* 1.3 76.0 - - + +
63A LEU* 1.3 51.0 + - - +
65A LYS* 3.2 13.8 + - + +
66A MET* 2.9 42.7 + - + +
57B LEU* 3.9 22.4 - - + -
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Residues in contact with LEU 63 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
59A ALA 2.8 28.5 + - - +
60A ASN* 3.8 11.2 - - - +
62A LYS* 1.3 72.8 - - - +
64A LYS* 1.3 55.3 + - + +
66A MET* 3.3 15.0 + - + +
67A VAL* 2.8 41.3 + - - +
54B TYR* 3.9 15.0 - - + -
57B LEU* 3.2 35.2 - - + +
58B ILE* 3.6 16.2 - - + +
61B ALA* 3.8 28.9 - - + -
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Residues in contact with LYS 64 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
60A ASN* 3.0 32.4 + - - +
61A ASP* 3.5 14.0 + - - +
63A LEU* 1.3 75.3 - - + +
65A LYS* 1.3 58.5 + - + +
67A VAL* 3.2 6.7 + - - +
68A LYS* 3.0 47.8 + - - +
----------------------------------------------------------
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Residues in contact with LYS 65 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
61A ASP* 2.9 31.8 + - - +
62A LYS* 3.4 14.3 - - + +
64A LYS* 1.3 71.0 - - + +
66A MET* 1.3 70.5 + - + +
68A LYS* 3.4 10.2 + - + +
69A ASP* 2.9 35.3 + - - +
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Residues in contact with MET 66 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
62A LYS* 2.9 17.4 + - + +
63A LEU* 3.3 28.9 - - + +
65A LYS* 1.3 78.9 - - + +
67A VAL* 1.3 56.7 + - - +
69A ASP* 2.9 10.9 + - - +
70A GLN* 2.8 37.3 + - + +
50B TYR* 4.9 12.9 - - + +
53B GLU* 3.7 33.0 - - - +
54B TYR* 3.4 24.9 - - + -
57B LEU* 3.3 34.1 - - + -
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Residues in contact with VAL 67 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
63A LEU 2.8 29.0 + - - +
64A LYS* 3.2 6.3 + - - +
66A MET* 1.3 70.6 - - - +
68A LYS* 1.3 59.7 + - + +
70A GLN* 3.2 16.4 + - - +
71A GLN* 3.0 55.1 + - + +
54B TYR* 3.2 36.6 - - + +
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Residues in contact with LYS 68 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
64A LYS* 3.0 33.6 + - - +
65A LYS* 3.5 8.5 - - - +
67A VAL* 1.3 76.5 - - + +
69A ASP* 1.3 65.6 + - - +
71A GLN* 3.3 14.0 + - - +
72A GLU* 3.2 33.1 + - - +
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Residues in contact with ASP 69 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
65A LYS* 2.9 32.6 + - - +
66A MET* 2.9 12.5 + - - +
68A LYS* 1.3 74.3 - - - +
70A GLN* 1.3 57.8 + - - +
72A GLU* 3.3 17.4 + - - +
73A ALA* 2.9 30.6 + - - +
50B TYR* 4.9 22.7 - - + -
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Residues in contact with GLN 70 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
66A MET* 2.8 20.3 + - - +
67A VAL* 3.3 22.2 - - - +
69A ASP* 1.3 72.9 - - - +
71A GLN* 1.3 54.5 + - + +
73A ALA* 3.0 7.5 + - - +
74A GLU* 2.7 52.0 + - + +
47B ILE* 5.1 3.4 - - + -
50B TYR* 4.3 19.1 - - + +
51B LYS* 3.7 29.4 - - + +
54B TYR* 3.3 38.4 - - - +
----------------------------------------------------------
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Residues in contact with GLN 71 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
67A VAL* 3.0 40.3 + - + +
68A LYS* 3.3 12.8 + - - +
70A GLN* 1.3 75.5 - - + +
72A GLU* 1.3 58.7 + - + +
74A GLU* 3.3 12.1 + - - +
75A LYS* 2.8 54.2 + - - +
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Residues in contact with GLU 72 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
68A LYS* 3.2 21.7 + - - +
69A ASP* 3.5 16.0 - - - +
71A GLN* 1.3 76.3 - - + +
73A ALA* 1.3 57.7 + - - +
75A LYS* 3.2 9.1 + - + +
76A LYS* 2.8 55.4 + - - +
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Residues in contact with ALA 73 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
69A ASP 2.9 17.3 + - - +
70A GLN* 3.0 3.1 + - - +
72A GLU* 1.3 75.2 - - - +
74A GLU* 1.3 53.0 + - - +
76A LYS* 3.2 8.6 + - - +
77A LYS* 2.8 39.8 + - - +
43B LEU* 5.5 5.2 - - + -
46B SER* 4.5 11.2 - - - +
47B ILE* 3.3 30.7 - - + -
50B TYR* 5.6 4.5 - - + -
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Residues in contact with GLU 74 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
70A GLN* 2.7 35.5 + - - +
71A GLN* 3.6 10.3 - - - +
73A ALA* 1.3 71.0 - - - +
75A LYS* 1.3 57.6 + - + +
77A LYS* 3.2 5.1 + - - +
78A VAL* 2.9 39.3 + - + +
47B ILE* 3.5 18.8 - - + -
51B LYS* 3.7 25.4 + - - +
----------------------------------------------------------
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Residues in contact with LYS 75 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
71A GLN* 2.8 42.5 + - - +
72A GLU* 3.7 7.0 - - + +
74A GLU* 1.3 72.9 - - + +
76A LYS* 1.3 58.0 + - + +
78A VAL* 3.3 7.7 + - - +
79A MET* 3.0 44.3 + - + +
----------------------------------------------------------
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Residues in contact with LYS 76 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
72A GLU* 2.8 41.3 + - - +
73A ALA* 3.6 6.7 - - - +
75A LYS* 1.3 75.9 - - + +
77A LYS* 1.3 55.8 + - - +
79A MET* 3.3 21.4 + - + +
80A SER* 2.9 32.4 + - - -
43B LEU* 4.1 23.7 - - + +
----------------------------------------------------------
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Residues in contact with LYS 77 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
73A ALA* 2.8 20.9 + - - +
74A GLU* 3.5 6.1 - - - +
76A LYS* 1.3 70.4 - - - +
78A VAL* 1.3 66.2 + - + +
80A SER* 2.9 20.1 + - - -
81A GLN* 2.9 31.5 + - - +
40B ILE* 5.4 1.6 - - + +
43B LEU* 2.7 52.1 + - + -
44B GLU* 2.7 31.9 + - + +
47B ILE* 2.7 43.4 - - + +
----------------------------------------------------------
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Residues in contact with VAL 78 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
74A GLU* 2.9 27.7 + - + +
75A LYS* 3.6 6.7 - - - +
77A LYS* 1.3 76.8 - - + +
79A MET* 1.3 64.4 + - + +
81A GLN* 3.4 8.3 + - - +
82A GLU* 3.2 43.9 + - + +
----------------------------------------------------------
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Residues in contact with MET 79 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
75A LYS* 3.0 18.1 + - + +
76A LYS* 3.4 34.8 - - + +
78A VAL* 1.3 77.7 - - + +
80A SER* 1.3 57.7 + - - +
82A GLU* 3.2 13.4 + - - +
83A ILE* 3.0 39.8 + - + +
----------------------------------------------------------
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Residues in contact with SER 80 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
76A LYS 2.9 18.8 + - - -
77A LYS* 2.9 20.6 + - - -
79A MET* 1.3 72.0 - - - +
81A GLN* 1.3 55.6 + - - +
83A ILE* 3.2 13.0 + - - +
84A GLN* 2.8 34.5 + - - +
36B VAL* 4.0 10.7 - - - +
39B MET* 6.0 2.9 - - - -
40B ILE* 3.2 27.5 - - - +
43B LEU* 4.0 7.9 - - - +
----------------------------------------------------------
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Residues in contact with GLN 81 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
77A LYS* 2.9 42.3 + - - +
78A VAL* 3.8 8.1 - - - +
80A SER* 1.3 76.2 - - - +
82A GLU* 1.3 57.4 + - + +
84A GLN* 3.9 3.0 - - - +
85A GLU* 3.0 42.8 + - - +
40B ILE* 3.5 22.4 - - + +
44B GLU* 3.6 20.6 + - - -
----------------------------------------------------------
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Residues in contact with GLU 82 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
78A VAL* 3.2 34.5 + - + +
79A MET* 3.2 11.1 + - - +
81A GLN* 1.3 76.0 - - + +
83A ILE* 1.3 59.7 + - + +
85A GLU* 3.2 13.2 + - - +
86A GLN* 2.9 44.0 + - - +
----------------------------------------------------------
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Residues in contact with ILE 83 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
79A MET* 3.0 27.7 + - + +
80A SER* 3.6 11.4 - - - +
82A GLU* 1.3 77.0 - - + +
84A GLN* 1.3 50.8 + - - +
86A GLN* 3.3 15.3 + - - +
87A LEU* 2.8 59.7 + - + +
36B VAL* 4.8 11.4 - - + -
----------------------------------------------------------
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Residues in contact with GLN 84 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
80A SER 2.8 18.0 + - - +
81A GLN* 3.9 5.8 - - - +
82A GLU 3.3 0.2 - - - -
83A ILE* 1.3 73.0 - - - +
85A GLU* 1.3 53.9 + - + +
87A LEU* 2.8 11.5 + - + +
88A HIS* 2.7 54.7 + - + +
33B ALA* 5.3 2.0 - - - +
36B VAL* 2.7 54.3 + - + +
37B GLU* 2.9 20.9 - - + +
40B ILE* 3.0 29.1 - - - +
----------------------------------------------------------
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Residues in contact with GLU 85 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
81A GLN* 3.0 30.7 + - - +
82A GLU* 3.5 11.1 - - - +
84A GLN* 1.3 76.5 - - + +
86A GLN* 1.3 58.3 + - + +
88A HIS* 3.4 12.2 + - + +
89A LYS* 3.0 47.1 + - - +
----------------------------------------------------------
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Residues in contact with GLN 86 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
82A GLU* 2.9 31.1 + - - +
83A ILE* 3.4 16.2 - - + +
85A GLU* 1.3 75.5 - - + +
87A LEU* 1.3 57.6 + - + +
89A LYS* 3.3 9.3 + - + +
90A GLN* 3.0 49.4 + - + +
----------------------------------------------------------
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Residues in contact with LEU 87 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
83A ILE* 2.8 40.5 + - + +
84A GLN* 2.8 6.4 + - - +
86A GLN* 1.3 73.5 - - + +
88A HIS* 1.3 58.0 + - + +
90A GLN* 3.4 20.6 + - - +
91A GLN* 2.9 49.6 + - + +
29B ASN* 4.8 13.2 - - + +
32B LYS* 3.9 37.7 - - + -
33B ALA* 4.1 5.8 - - + +
36B VAL* 4.0 21.5 - - + -
----------------------------------------------------------
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Residues in contact with HIS 88 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
84A GLN* 2.7 52.6 + - + +
85A GLU* 3.6 13.0 - - + +
87A LEU* 1.3 70.8 - - + +
89A LYS* 1.3 57.7 + - + +
91A GLN* 3.2 16.7 + - - +
92A GLU* 3.0 41.9 + - + +
33B ALA* 4.9 8.1 - - + -
37B GLU* 3.5 26.5 - - + -
----------------------------------------------------------
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Residues in contact with LYS 89 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
85A GLU* 3.0 35.5 + - - +
86A GLN* 3.3 8.3 + - + +
88A HIS* 1.3 74.0 - - + +
90A GLN* 1.3 65.3 + - + +
92A GLU* 3.2 14.2 + - - +
93A VAL* 3.1 30.2 + - + +
----------------------------------------------------------
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Residues in contact with GLN 90 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
86A GLN* 3.0 34.9 + - - +
87A LEU* 3.7 20.6 - - - +
89A LYS* 1.3 73.4 - - + +
91A GLN* 1.3 57.0 + - - +
93A VAL* 3.3 8.2 + - - +
94A ILE* 2.9 43.2 + - + +
29B ASN* 4.5 12.2 + - - +
----------------------------------------------------------
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Residues in contact with GLN 91 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
87A LEU* 2.9 31.5 + - - +
88A HIS* 3.5 15.2 + - - +
90A GLN* 1.3 73.8 - - - +
92A GLU* 1.3 55.0 + - + +
94A ILE* 3.1 8.8 + - - +
95A ALA* 2.8 35.9 + - - +
26B ALA* 6.1 1.3 - - - +
29B ASN* 3.1 34.2 + - + +
30B GLN* 3.7 15.5 - - + +
33B ALA* 3.0 35.7 - - - +
----------------------------------------------------------
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Residues in contact with GLU 92 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
88A HIS* 3.0 26.8 + - - +
89A LYS* 3.2 12.6 + - - +
91A GLN* 1.3 74.1 - - + +
93A VAL* 1.3 59.4 + - + +
95A ALA* 3.3 6.0 + - - +
96A ASP* 2.8 45.0 + - - +
----------------------------------------------------------
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Residues in contact with VAL 93 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
89A LYS* 3.1 16.7 + - + +
90A GLN* 3.6 10.3 - - - +
92A GLU* 1.3 75.4 - - + +
94A ILE* 1.3 60.9 + - + +
96A ASP* 3.1 8.1 + - - +
97A LYS* 2.8 67.4 + - + +
----------------------------------------------------------
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Residues in contact with ILE 94 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
90A GLN* 2.9 33.8 + - + +
91A GLN* 3.1 7.8 + - - +
93A VAL* 1.3 77.5 - - + +
95A ALA* 1.3 53.7 + - - +
97A LYS* 3.2 7.4 + - + +
98A GLN* 2.7 73.8 + - + +
22B LEU* 3.5 21.5 - - + +
25B ASP* 4.3 11.4 - - + -
26B ALA* 3.8 9.9 - - + +
29B ASN* 2.9 34.1 - - + +
----------------------------------------------------------
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Residues in contact with ALA 95 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
91A GLN 2.8 17.3 + - - +
92A GLU* 3.6 7.6 - - - +
94A ILE* 1.3 74.9 - - - +
96A ASP* 1.3 60.2 + - - +
98A GLN* 3.2 12.6 + - - +
99A MET* 2.8 42.2 + - + +
26B ALA* 5.8 0.4 - - - +
----------------------------------------------------------
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Residues in contact with ASP 96 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
92A GLU* 2.8 34.0 + - - +
93A VAL* 3.1 6.9 + - - +
95A ALA* 1.3 79.2 - - - +
97A LYS* 1.3 55.9 + - + +
99A MET* 3.1 28.1 + - + +
100A SER* 3.1 29.2 + - - -
----------------------------------------------------------
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Residues in contact with LYS 97 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
93A VAL* 2.8 44.7 + - + +
94A ILE* 3.5 6.7 - - + +
96A ASP* 1.3 74.8 - - + +
98A GLN* 1.3 58.6 + - - +
100A SER* 2.7 22.3 + - - -
101A VAL* 3.0 23.6 + - + +
22B LEU* 4.1 23.8 - - + -
----------------------------------------------------------
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Residues in contact with GLN 98 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
94A ILE* 2.7 41.6 + - - +
95A ALA* 3.6 8.9 - - - +
97A LYS* 1.3 71.0 - - - +
99A MET* 1.3 64.1 + - + +
101A VAL* 3.4 0.9 + - - +
102A LYS* 3.0 49.6 + - - +
19B LEU* 4.8 3.1 - - + -
22B LEU* 2.8 56.7 + - + -
23B GLU* 3.2 15.5 - - + +
26B ALA* 3.0 16.3 - - - +
----------------------------------------------------------
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Residues in contact with MET 99 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
95A ALA* 2.8 24.6 + - + +
96A ASP* 3.1 38.6 - - - +
97A LYS 3.3 0.2 - - - -
98A GLN* 1.3 77.6 - - + +
100A SER* 1.3 61.8 + - - +
102A LYS* 3.8 6.5 - - - +
103A GLU* 3.2 33.4 + - - +
----------------------------------------------------------
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Residues in contact with SER 100 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
96A ASP 3.1 11.6 + - - -
97A LYS* 2.7 28.9 + - - -
99A MET* 1.3 76.1 - - - +
101A VAL* 1.3 59.8 + - - +
103A GLU* 3.2 12.5 + - - +
104A ASP* 2.9 39.3 + - - +
----------------------------------------------------------
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Residues in contact with VAL 101 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
97A LYS* 3.0 27.2 + - + +
100A SER* 1.3 84.5 + - - +
102A LYS* 1.3 56.2 + - - +
104A ASP* 3.2 8.7 + - + +
105A LEU* 2.8 30.0 + - + +
15B LEU* 4.0 36.1 - - + +
18B GLU* 4.7 11.0 - - + +
19B LEU* 3.3 30.5 - - + -
22B LEU* 4.2 12.3 - - + -
----------------------------------------------------------
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Residues in contact with LYS 102 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
98A GLN* 3.0 46.3 + - - +
99A MET* 3.8 6.5 - - - +
100A SER 3.3 0.2 - - - -
101A VAL* 1.3 74.9 - - - +
103A GLU* 1.3 52.8 + - + +
105A LEU* 3.6 4.9 + - - +
106A ASP* 2.7 46.1 + - - +
19B LEU* 4.0 19.3 - - + -
23B GLU* 3.2 33.7 + - - +
----------------------------------------------------------
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Residues in contact with GLU 103 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
99A MET* 3.2 23.7 + - - +
100A SER* 3.2 10.1 + - - +
102A LYS* 1.3 75.8 - - + +
104A ASP* 1.3 63.2 + - - +
106A ASP* 3.1 10.5 + - - +
107A LYS* 2.9 47.5 + - - +
----------------------------------------------------------
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Residues in contact with ASP 104 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
100A SER* 2.9 31.1 + - - +
101A VAL* 3.2 14.4 + - + +
103A GLU* 1.3 77.2 - - - +
105A LEU* 1.3 58.0 + - - +
107A LYS* 3.2 20.2 + - - +
108A VAL* 2.8 36.0 + - + +
15B LEU* 4.5 14.3 - - + +
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Residues in contact with LEU 105 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
101A VAL* 2.8 18.2 + - + +
102A LYS* 3.8 6.1 - - - +
104A ASP* 1.3 73.6 - - - +
106A ASP* 1.3 59.3 + - - +
108A VAL* 3.1 3.2 + - + +
109A GLU* 2.8 49.6 + - - +
12B VAL* 4.0 20.6 - - + +
15B LEU* 3.1 38.1 - - + -
16B ARG* 3.7 22.9 - - + +
19B LEU* 3.2 36.3 - - + -
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Residues in contact with ASP 106 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
102A LYS* 2.7 28.3 + - - +
103A GLU* 3.1 8.6 + - - +
105A LEU* 1.3 80.3 - - - +
107A LYS* 1.3 52.4 - - + +
109A GLU* 4.0 18.4 - - - +
110A PRO* 2.7 27.5 - - - +
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Residues in contact with LYS 107 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
103A GLU* 2.9 34.9 + - - +
104A ASP* 3.2 19.7 + - - +
106A ASP* 1.3 73.3 - - + +
108A VAL* 1.3 56.7 + - + +
110A PRO* 3.0 23.9 - - - +
111A ALA* 3.3 15.6 + - - +
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Residues in contact with VAL 108 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
104A ASP* 2.8 29.9 + - + +
105A LEU* 3.1 7.4 + - + +
107A LYS* 1.3 75.2 - - + +
109A GLU* 1.3 55.9 + - - +
111A ALA* 3.1 5.7 + - - +
112A VAL* 2.8 40.1 + - + +
8B MET* 3.6 23.3 - - + +
11B ARG* 4.7 7.9 - - + -
12B VAL* 3.3 30.7 - - + +
15B LEU* 3.9 17.7 - - + -
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Residues in contact with GLU 109 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
105A LEU* 2.8 41.6 + - - +
106A ASP* 4.0 16.1 - - - +
108A VAL* 1.3 70.5 - - - +
110A PRO* 1.3 52.3 - - + +
112A VAL* 3.2 8.8 + - - +
113A ILE* 2.8 46.1 + - + +
12B VAL* 4.8 7.3 - - + +
16B ARG* 4.7 24.3 + - - +
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Residues in contact with PRO 110 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
106A ASP 2.7 29.8 - - - +
107A LYS* 3.0 27.6 - - - +
109A GLU* 1.3 85.9 - - + +
111A ALA* 1.3 56.8 + - - +
113A ILE* 3.3 13.0 + - + +
114A GLU* 2.9 47.0 + - + +
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Residues in contact with ALA 111 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
107A LYS 3.4 15.0 - - - +
108A VAL* 3.1 7.4 + - - +
110A PRO* 1.3 79.9 - - - +
112A VAL* 1.3 57.2 + - - +
114A GLU* 3.7 11.1 - - - +
115A ALA* 2.9 33.8 + - - +
8B MET* 3.6 20.6 - - - +
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Residues in contact with VAL 112 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
108A VAL 2.8 28.8 + - - +
109A GLU* 3.4 7.4 - - - +
111A ALA* 1.3 73.4 - - - +
113A ILE* 1.3 58.8 + - + +
115A ALA* 3.8 0.5 - - - +
116A GLN* 2.8 69.4 + - + +
5B TYR* 5.5 1.1 - - + -
8B MET* 3.5 37.9 - - + -
9B LEU* 3.6 18.2 - - + -
12B VAL* 4.0 14.4 - - + -
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Residues in contact with ILE 113 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
109A GLU* 2.8 34.7 + - + +
110A PRO* 3.6 10.5 - - + +
112A VAL* 1.3 73.0 - - + +
114A GLU* 1.3 65.6 + - + +
116A GLN* 3.2 11.8 + - - +
117A ASN* 2.9 41.9 + - - +
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Residues in contact with GLU 114 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
110A PRO* 2.9 35.2 + - + +
111A ALA* 3.7 8.4 - - - +
113A ILE* 1.3 78.0 - - + +
115A ALA* 1.3 67.1 + - + +
117A ASN* 3.3 9.7 + - - +
118A ALA* 3.1 19.0 + - - +
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Residues in contact with ALA 115 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
111A ALA 2.9 18.7 + - - +
114A GLU* 1.3 78.2 - - + +
116A GLN* 1.3 58.0 + - - +
118A ALA* 2.8 21.5 + - - +
119A VAL 2.9 5.0 + - - -
4B ASN* 6.2 0.7 - - + -
5B TYR* 2.7 42.6 + - + +
8B MET* 3.6 13.9 - - + -
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Residues in contact with GLN 116 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
112A VAL* 2.8 52.1 + - + +
113A ILE* 3.2 10.7 + - - +
115A ALA* 1.3 74.0 - - - +
117A ASN* 1.3 65.1 + - - +
119A VAL* 3.1 21.5 + - - +
5B TYR* 3.2 16.9 - - + -
9B LEU* 4.4 9.1 - - - +
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Residues in contact with ASN 117 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
113A ILE* 2.9 34.7 + - - +
114A GLU* 3.5 8.6 + - - +
115A ALA 3.1 0.2 - - - -
116A GLN* 1.3 76.6 - - - +
118A ALA* 1.3 62.9 + - - +
119A VAL* 3.4 7.7 - - - +
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Residues in contact with ALA 118 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
114A GLU 3.1 12.6 + - - +
115A ALA* 2.8 19.2 + - - +
117A ASN* 1.3 73.2 - - - +
119A VAL* 1.3 59.0 + - - +
1B ALA* 6.3 0.2 - - - -
5B TYR* 3.9 7.4 - - - +
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Residues in contact with VAL 119 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
115A ALA 2.9 10.1 + - - -
116A GLN* 3.1 19.4 + - - +
117A ASN 3.4 5.9 - - - +
118A ALA* 1.3 76.6 - - - +
1B ALA* 3.9 12.6 - - + -
2B GLN* 4.7 18.8 - - + +
5B TYR* 3.0 44.6 - - + +
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A short description of the
analytical approach
The contact analysis used in this page
is based upon the approach
developed in:
Sobolev V., Wade R.C., Vriend G.
and Edelman M. PROTEINS (1996)
25, 120-129.
Contact legitimacy depends on the hydrophobic-hydrophilic
properties of the contacting atoms. In order to
define it, for each inter-atomic contact,
eight atom classes have been introduced:
I Hydrophilic - N and O that can donate and accept hydrogen bonds
(e.g., oxygen of hydroxyl group of Ser. or Thr)
II Acceptor - N or O that can only accept a hydrogen bond
III Donor - N that can only donate a hydrogen bond
IV Hydrophobic - Cl, Br, I and all C atoms that are not in
aromatic rings and do not have a covalent bond to
a N or O atom
V Aromatic - C in aromatic rings irrespective of any other
bonds formed by the atom
VI Neutral - C atoms that have a covalent bond to at least one
atom of class I or two or more atoms from class II
or III; atoms; S, F, P, and metal atoms in all cases
VII Neutral-donor - C atoms that have a covalent bond with only one
atom of class III
VIII Neutral-acceptor - C atoms that have a covalent bond with only
one atom of class II
For each pair of contacts the state of legitimacy
is shown below:
Legend:
+, legitimate
-, illegitimate
------------------------------------------------------------
Atomic class I II III IV V VI VII VIII
------------------------------------------------------------
I (Hydrophilic) + + + - + + + +
II (Acceptor) + - + - + + + -
III (Donor) + + - - + + - +
IV (Hydrophobic) - - - + + + + +
V (Aromatic) + + + + + + + +
VI (Neutral) + + + + + + + +
VII (Neutral-donor) + + - + + + - +
VIII (Neutral-acceptor) + - + + + + + -
------------------------------------------------------------
Warning!
Atom classes for heterogroups are automatically
assigned based on the atomic coordinates. However, in
three cases (see below) the automatic assignment
is currently ambiguous. In these
cases, the user is advised to manually analyse
the full list of contacts using
LPC software.
1. Carbon atoms belonging to a 4-, 5- or 6-member ring are
considered "aromatic" (Class V) if the ring is approximately
planar, and "hydrophobic" (Class IV) or "neutral" (Classes
VI, VII, VIII) if the ring is non-planar.
2. The oxygen atom of a carbonyl or hydroxy group is considered
"hydroxy" (Class I) if the CO bond is longer than 1.29 Å, and
"carbonyl" (Class II) if shorter.
3. All nitrogen atoms are considered "hydrophilic" (Class I).
Please E-mail any
questions and/or suggestions concerning this page to
Vladimir.Sobolev@weizmann.ac.il