Contacts of the strand formed by residues 147 - 171 (chain C) in PDB entry 3B93
Residue contacts within the protein are
derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332). A
short description of the analytical approach
is given at the end of the page.
Note:
Non-standard 3 letter residue
codes indicate a heterogroup. To identify
and analyse, use LPC software
Legend:
Dist - nearest distance (Å) between atoms of two residues
Surf - contact surface area (Å2) between two residues
HB - hydrophilic-hydrophilic contact (hydrogen bond)
Arom - aromatic-aromatic contact
Phob - hydrophobic-hydrophobic contact
DC - hydrophobic-hydrophilic contact (destabilizing contact)
+/- - indicates presence/absence of a specific contacts
* - indicates residues forming contacts by their side chain
(including CA atoms)
Residues in contact with THR 147 (chain C).
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Specific contacts
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Residue Dist Surf HB Arom Phob DC
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82C VAL* 4.8 6.7 - - + -
86C LYS* 3.9 29.2 + - - +
87C LEU 3.4 12.6 - - - +
88C GLU* 4.2 12.6 - - + -
118C TYR 4.3 0.2 - - - -
119C LYS* 3.2 7.4 - - - +
120C ASN* 2.7 56.4 + - - +
145C GLY 4.0 9.0 - - - +
146C ASP* 1.3 79.3 - - - +
148C ILE* 1.3 63.0 + - - +
149C ASP* 5.2 0.5 + - - +
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Residues in contact with ILE 148 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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85C TRP 3.8 1.0 - - - +
86C LYS* 3.2 6.2 - - - +
87C LEU* 3.0 37.7 + - + +
89C ILE* 4.0 17.3 - - + -
97C ILE* 4.3 15.7 - - + -
117C LEU* 3.7 25.1 - - + -
118C TYR 3.2 11.2 - - - +
119C LYS* 4.5 8.7 - - + -
124C ILE* 5.3 3.8 - - + -
142C LEU* 3.5 36.6 - - + -
146C ASP* 5.4 0.4 - - + -
147C THR* 1.3 80.1 - - - +
149C ASP* 1.3 62.6 + - - +
165C TRP* 3.5 27.6 - - + -
167C ILE* 5.7 0.4 - - + -
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Residues in contact with ASP 149 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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84C ASP 4.3 1.9 - - - +
85C TRP* 3.6 13.6 - - - +
86C LYS* 3.4 38.6 - - + +
116C ARG 3.7 0.6 - - - +
117C LEU* 3.6 6.4 - - - +
118C TYR* 2.9 37.8 + - + +
120C ASN 5.8 1.1 - - - +
147C THR* 4.3 0.9 - - - +
148C ILE* 1.3 77.6 - - - +
150C LEU* 1.3 76.7 + - - +
151C ILE* 3.5 31.1 - - + +
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Residues in contact with LEU 150 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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85C TRP* 3.3 37.1 + - + +
101C VAL* 5.3 9.9 - - + -
115C VAL* 4.5 10.5 - - + -
116C ARG 3.4 21.1 - - - +
117C LEU* 4.2 13.7 - - + +
136C VAL* 4.5 15.7 - - + -
149C ASP* 1.3 79.9 + - - +
151C ILE* 1.3 67.5 + - - +
163C THR* 6.1 0.9 - - + -
164C TYR 4.4 7.2 - - - +
165C TRP* 3.2 47.8 - - + +
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Residues in contact with ILE 151 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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115C VAL* 3.6 10.0 - - - +
116C ARG* 2.8 52.6 + - + +
118C TYR* 3.7 26.7 - - + -
149C ASP* 3.5 30.7 - - + +
150C LEU* 1.3 79.5 - - - +
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Residues in contact with THR 163 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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64C PRO* 3.7 21.7 - - - +
65C LEU* 4.6 3.2 + - - +
85C TRP* 3.2 28.5 - - + -
100C GLN* 3.0 26.6 + - - +
101C VAL* 3.7 30.8 - - + -
102C ALA 4.4 2.8 + - - +
150C LEU* 6.1 2.5 - - + -
164C TYR* 1.3 77.7 + - - +
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Residues in contact with TYR 164 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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119A LYS* 5.2 3.5 + - - -
140A TYR* 5.6 2.1 - - - -
141A GLU* 3.5 37.7 + - + +
61C LYS* 3.4 17.3 - - + -
62C PHE 3.3 10.5 - - - +
64C PRO* 2.7 42.4 - - + -
85C TRP* 4.1 4.0 - - - -
98C TYR* 4.0 16.8 - + - -
99C GLY* 3.1 7.9 - - - -
100C GLN* 2.8 68.5 + - + +
136C VAL* 4.4 2.3 - - - +
150C LEU* 4.4 2.9 - - - +
163C THR* 1.3 77.7 - - - +
165C TRP* 1.3 71.5 + - - +
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Residues in contact with TRP 165 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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61C LYS* 3.4 6.8 - - - +
62C PHE* 3.0 30.1 + - - +
69C TRP* 3.4 19.8 - + - -
85C TRP* 2.8 47.2 + + - +
87C LEU* 3.6 26.2 - - + -
97C ILE* 3.7 31.2 - - + -
98C TYR 3.1 14.8 - - - +
99C GLY* 3.5 4.0 - - - -
117C LEU* 4.9 1.6 - - + -
136C VAL* 4.1 5.8 - - + -
148C ILE* 3.5 28.9 - - + -
150C LEU* 3.2 38.8 - - + +
164C TYR* 1.3 79.2 - - - +
166C GLY* 1.3 81.0 + - - +
167C ILE* 4.2 11.0 - - + -
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Residues in contact with GLY 166 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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60C ALA 2.9 15.3 - - - -
61C LYS* 3.9 1.8 - - - -
69C TRP* 5.5 0.4 - - - -
97C ILE* 3.4 4.5 - - - -
98C TYR* 2.8 48.3 + - - +
165C TRP* 1.3 86.9 - - - +
167C ILE* 1.3 63.2 + - - +
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Residues in contact with ILE 167 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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58C CYS 5.6 0.4 - - - +
59C MET* 3.2 11.4 - - - +
60C ALA* 2.8 44.6 + - + +
78C CYS* 5.7 1.3 - - - -
79C VAL* 4.3 12.6 - - + -
87C LEU* 4.2 14.6 - - + -
89C ILE* 5.1 4.9 - - + -
95C TYR* 3.3 42.4 - - + -
96C LEU 3.2 17.5 - - - +
97C ILE* 3.1 28.9 - - + -
98C TYR* 3.5 4.0 - - - -
142C LEU* 4.8 1.3 - - + -
165C TRP* 4.2 9.6 - - + -
166C GLY* 1.3 75.7 - - - +
168C ILE* 1.3 64.7 + - - +
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Residues in contact with ILE 168 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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94A LEU* 4.0 21.5 - - + -
170A LEU* 4.6 9.2 - - + +
171A ALA* 3.9 16.4 - - + -
57C PRO* 4.8 8.5 - - + -
58C CYS 3.5 8.3 - - - +
59C MET* 3.7 33.0 - - + -
95C TYR* 3.3 5.9 - - - -
96C LEU* 2.9 54.5 + - + +
98C TYR* 4.8 0.9 - - + -
167C ILE* 1.3 78.4 - - - +
169C LEU* 1.3 76.3 + - - +
170C LEU* 3.3 11.5 + - + -
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Residues in contact with LEU 169 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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57C PRO* 5.7 2.1 - - - +
58C CYS* 2.9 33.2 + - + +
78C CYS* 4.4 1.3 - - + -
91C GLN* 3.5 18.6 - - - +
92C ASN 4.6 1.1 - - - +
93C GLY* 4.0 5.6 - - - -
94C LEU 3.8 5.4 - - - +
95C TYR* 3.5 42.4 - - + +
168C ILE* 1.3 79.5 - - - +
170C LEU* 1.3 60.4 + - - +
171C ALA 3.3 28.5 - - - +
172C ASN* 3.3 25.8 - - - +
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Residues in contact with LEU 170 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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170A LEU* 5.0 15.0 - - + -
57B PRO* 5.3 4.0 - - - +
96B LEU* 5.0 4.0 - - + -
168B ILE* 4.8 16.3 - - + +
170B LEU* 5.0 13.2 - - + -
94C LEU* 2.8 38.5 + - + +
95C TYR 4.6 0.4 - - - -
96C LEU* 4.2 31.6 - - + +
139C THR* 4.2 15.7 - - + +
168C ILE* 3.3 21.3 + - + -
169C LEU* 1.3 75.6 - - - +
171C ALA* 1.3 62.1 + - + +
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Residues in contact with ALA 171 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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57B PRO* 4.7 17.0 - - + -
59B MET* 3.7 28.9 - - - -
168B ILE* 4.6 11.0 - - + -
94C LEU* 2.9 30.4 + - + -
169C LEU* 3.3 10.6 - - - +
170C LEU* 1.3 81.6 - - - +
172C ASN* 1.3 65.8 + - - +
173C PRO* 3.6 3.6 - - + -
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Residues in contact with ASN 172 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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57B PRO* 6.0 0.4 - - - +
91C GLN* 2.6 34.8 + - + +
92C ASN 3.6 17.0 - - - +
93C GLY* 4.4 1.8 - - - -
169C LEU* 3.3 14.1 - - - +
171C ALA* 1.3 78.8 - - - +
173C PRO* 1.3 69.5 - - - +
174C GLN* 4.7 1.9 + - - -
176C ILE* 4.8 0.4 - - + -
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Residues in contact with PRO 173 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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57B PRO* 5.8 1.6 - - + +