Contacts of the helix formed by residues 58 - 144 (chain A) in PDB entry 3NI0
Residue contacts within the protein are
derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332). A
short description of the analytical approach
is given at the end of the page.
Note:
Non-standard 3 letter residue
codes indicate a heterogroup. To identify
and analyse, use LPC software
Legend:
Dist - nearest distance (Å) between atoms of two residues
Surf - contact surface area (Å2) between two residues
HB - hydrophilic-hydrophilic contact (hydrogen bond)
Arom - aromatic-aromatic contact
Phob - hydrophobic-hydrophobic contact
DC - hydrophobic-hydrophilic contact (destabilizing contact)
+/- - indicates presence/absence of a specific contacts
* - indicates residues forming contacts by their side chain
(including CA atoms)
Residues in contact with CYS 58 (chain A).
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
57A ALA* 1.3 78.6 - - - +
59A ARG* 1.3 64.1 + - - +
60A ASP 3.2 2.0 - - - -
61A GLY* 3.1 14.4 + - - +
62A LEU* 3.2 20.6 + - + +
58B CYS* 2.0 47.8 - - - -
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Residues in contact with ARG 59 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
57A ALA* 3.1 25.3 - - + +
58A CYS* 1.3 77.9 - - - +
60A ASP* 1.3 66.1 + - - +
62A LEU* 3.2 12.6 + - + +
63A ARG* 3.1 53.7 + - - +
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Residues in contact with ASP 60 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
57A ALA 3.6 21.6 + - - +
58A CYS 3.2 0.2 - - - -
59A ARG* 1.3 80.4 - - - +
61A GLY* 1.3 60.3 + - - +
63A ARG* 3.5 13.9 + - - +
64A ALA* 3.1 23.4 + - - +
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Residues in contact with GLY 61 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
58A CYS* 3.1 13.0 + - - +
60A ASP* 1.3 76.1 - - - +
62A LEU* 1.3 63.5 + - - +
64A ALA* 3.2 8.0 + - - +
65A GLN* 3.0 24.9 + - - +
61B GLY* 6.4 2.5 - - - -
65B GLN* 5.3 2.5 - - - +
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Residues in contact with LEU 62 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
58A CYS* 3.2 17.7 + - + +
59A ARG* 3.2 13.7 + - + +
61A GLY* 1.3 75.4 - - - +
63A ARG* 1.3 58.5 + - + +
65A GLN* 3.4 8.6 + - + +
66A ALA* 3.0 28.6 + - - +
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Residues in contact with ARG 63 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
59A ARG* 3.1 53.9 + - - +
60A ASP* 3.7 12.7 + - - +
62A LEU* 1.3 76.1 - - + +
64A ALA* 1.3 65.4 + - - +
66A ALA* 3.4 7.0 + - - +
67A GLU* 3.0 24.8 + - - +
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Residues in contact with ALA 64 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
60A ASP 3.1 16.6 + - - +
61A GLY* 3.2 8.0 + - - +
63A ARG* 1.3 76.2 - - - +
65A GLN* 1.3 57.3 + - - +
67A GLU* 3.4 12.1 + - - +
68A CYS* 3.1 23.4 + - - +
65B GLN* 3.6 26.3 - - + +
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Residues in contact with GLN 65 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
61A GLY 3.0 16.5 + - - +
62A LEU* 3.7 10.5 - - + +
63A ARG 3.3 0.2 - - - -
64A ALA* 1.3 74.0 - - - +
66A ALA* 1.3 60.2 + - - +
68A CYS* 3.4 2.1 + - - +
69A ARG* 3.0 30.2 + - + +
61B GLY* 3.5 7.8 - - - +
64B ALA* 3.1 47.0 + - + +
65B GLN* 3.1 31.4 + - - +
68B CYS* 4.0 9.5 - - - +
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Residues in contact with ALA 66 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
62A LEU 3.0 15.7 + - - +
63A ARG* 3.7 7.4 - - - +
65A GLN* 1.3 75.8 - - - +
67A GLU* 1.3 60.0 + - - +
69A ARG* 3.2 6.9 + - - +
70A ASN* 2.9 44.4 + - - +
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Residues in contact with GLU 67 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
63A ARG 3.0 17.3 + - - +
64A ALA* 3.6 10.5 - - - +
66A ALA* 1.3 77.1 - - - +
68A CYS* 1.3 56.9 + - - +
70A ASN* 3.3 9.0 + - - +
71A THR* 2.8 40.6 + - - +
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Residues in contact with CYS 68 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
64A ALA 3.1 16.6 + - - +
65A GLN 3.9 1.3 - - - +
66A ALA 3.2 0.2 - - - -
67A GLU* 1.3 76.9 - - - +
69A ARG* 1.3 61.5 + - - +
71A THR* 3.3 5.7 + - - -
72A THR* 3.0 30.1 + - - +
65B GLN* 3.7 16.8 - - - +
68B CYS* 2.0 62.8 - - - -
69B ARG* 3.8 4.9 - - - -
72B THR* 3.6 8.7 - - - -
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Residues in contact with ARG 69 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
65A GLN* 3.0 19.9 + - + +
66A ALA* 3.6 6.7 - - - +
68A CYS* 1.3 76.7 - - - +
70A ASN* 1.3 69.1 + - - +
72A THR* 2.8 21.3 + - - +
73A HIS* 3.1 44.1 + - - +
68B CYS* 3.7 5.5 - - - -
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Residues in contact with ASN 70 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
66A ALA* 2.9 30.0 + - - +
67A GLU* 3.6 7.7 - - - +
69A ARG* 1.3 86.2 + - - +
71A THR* 1.3 58.8 + - - +
73A HIS* 3.4 7.1 + - - +
74A LEU* 3.0 29.9 + - - +
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Residues in contact with THR 71 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
67A GLU* 2.8 29.7 + - - +
68A CYS* 3.7 7.1 - - - -
69A ARG 3.3 0.2 - - - -
70A ASN* 1.3 74.6 - - - +
72A THR* 1.3 60.6 + - - +
74A LEU* 3.3 7.5 + - + +
75A LEU* 2.9 48.4 + - + +
72B THR* 4.2 16.2 - - + -
76B GLN* 4.8 3.8 - - - +
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Residues in contact with THR 72 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
68A CYS 3.0 14.2 + - - +
69A ARG* 2.8 25.8 + - - +
71A THR* 1.3 73.8 - - - +
73A HIS* 1.3 64.6 + - - +
75A LEU* 3.3 2.4 + - - -
76A GLN* 3.0 32.1 + - - +
68B CYS* 3.9 12.5 - - - +
71B THR* 4.0 23.6 - - + -
72B THR* 3.3 22.9 - - - +
75B LEU* 3.5 15.0 - - - +
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Residues in contact with HIS 73 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
69A ARG* 3.1 39.4 + - - +
70A ASN* 3.4 8.3 + - - +
72A THR* 1.3 84.6 + - - +
74A LEU* 1.3 62.0 + - - +
76A GLN* 3.4 1.5 + - - -
77A ARG* 3.0 78.6 + - - +
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Residues in contact with LEU 74 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
70A ASN 3.0 17.1 + - - +
71A THR* 3.7 7.6 - - + +
73A HIS* 1.3 78.9 + - - +
75A LEU* 1.3 59.9 + - + +
77A ARG* 3.2 6.6 + - + +
78A GLN* 3.0 54.8 + - + +
81A ARG* 4.5 9.9 - - - +
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Residues in contact with LEU 75 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
71A THR* 2.9 39.2 + - + +
72A THR* 3.3 4.9 + - - +
74A LEU* 1.3 77.2 - - + +
76A GLN* 1.3 57.2 + - - +
78A GLN* 3.4 20.7 + - - +
79A LEU* 2.9 31.2 + - - +
72B THR* 3.7 15.9 - - + +
75B LEU* 3.9 20.4 - - + +
76B GLN* 3.5 37.2 - - + +
79B LEU* 3.9 19.1 - - + +
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Residues in contact with GLN 76 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
72A THR* 3.0 28.0 + - - +
73A HIS* 3.6 6.1 - - - +
75A LEU* 1.3 75.9 - - - +
77A ARG* 1.3 70.0 + - - +
79A LEU* 3.4 10.7 + - - +
80A THR* 3.0 34.6 + - - +
71B THR* 5.3 4.4 - - - +
75B LEU* 3.4 33.8 - - + +
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Residues in contact with ARG 77 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
73A HIS* 3.0 68.3 + - + +
74A LEU* 3.2 11.3 + - + +
76A GLN* 1.3 90.8 - - - +
78A GLN* 1.3 63.5 + - - +
80A THR* 3.4 6.4 + - - -
81A ARG* 3.0 45.3 + - + +
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Residues in contact with GLN 78 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
1A IPA 3.9 23.0 - - + +
74A LEU* 3.0 39.9 + - + +
75A LEU* 3.8 17.5 - - - +
77A ARG* 1.3 76.0 - - - +
79A LEU* 1.3 56.1 + - - +
81A ARG* 3.4 24.6 + - - +
82A THR* 2.8 37.8 + - - -
79B LEU* 3.6 24.7 - - + +
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Residues in contact with LEU 79 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
75A LEU 2.9 18.1 + - - +
76A GLN* 3.5 10.1 - - - +
78A GLN* 1.3 77.0 - - - +
80A THR* 1.3 57.4 + - - +
82A THR* 3.3 1.2 + - - -
83A GLN* 3.0 30.4 + - + +
75B LEU* 4.1 17.0 - - + +
78B GLN* 3.0 52.5 - - + +
79B LEU* 3.9 14.1 - - + +
82B THR* 3.4 27.4 - - + +
----------------------------------------------------------
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Residues in contact with THR 80 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
76A GLN* 3.0 19.2 + - - -
77A ARG* 3.8 6.0 - - - -
79A LEU* 1.3 76.9 - - - +
81A ARG* 1.3 59.5 + - + +
83A GLN* 3.5 6.3 + - - +
84A ASP* 3.1 27.4 + - + +
----------------------------------------------------------
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Residues in contact with ARG 81 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
1A IPA 3.8 24.1 - - + +
74A LEU* 4.5 8.5 - - - +
77A ARG* 3.0 31.4 + - + +
78A GLN* 3.5 27.7 - - - +
80A THR* 1.3 80.1 - - + +
82A THR* 1.3 55.5 + - - +
84A ASP* 3.3 7.8 + - - +
85A SER* 3.0 30.4 + - - -
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Residues in contact with THR 82 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
1A IPA 2.7 26.3 + - - +
78A GLN 2.8 21.6 + - - -
79A LEU 3.8 3.1 - - - -
81A ARG* 1.3 74.4 - - - +
83A GLN* 1.3 61.0 + - - +
85A SER* 3.3 7.1 + - - -
86A LEU* 2.9 27.0 + - - +
79B LEU* 3.5 8.5 - - - +
82B THR* 3.5 21.5 - - + +
83B GLN* 3.8 29.2 - - + +
86B LEU* 4.2 13.1 - - + +
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Residues in contact with GLN 83 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
79A LEU* 3.0 20.8 + - + +
80A THR* 3.8 6.3 - - - +
82A THR* 1.3 76.2 - - - +
84A ASP* 1.3 62.5 + - - +
86A LEU* 3.2 23.0 + - - +
87A LEU* 3.0 54.5 + - + +
82B THR* 3.5 16.4 + - + +
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Residues in contact with ASP 84 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
80A THR* 3.1 19.0 + - + +
81A ARG* 3.5 8.7 - - - +
82A THR 3.2 0.2 - - - -
83A GLN* 1.3 77.5 - - - +
85A SER* 1.3 61.4 + - - +
87A LEU* 3.3 13.6 + - - +
88A GLN* 2.8 52.8 + - - +
----------------------------------------------------------
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Residues in contact with SER 85 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
81A ARG 3.0 14.6 + - - -
82A THR* 3.3 9.6 + - - -
84A ASP* 1.3 74.0 + - - +
86A LEU* 1.3 65.9 + - - +
88A GLN* 3.2 15.8 + - - +
89A ALA* 2.9 23.9 + - - +
86B LEU* 3.6 22.7 - - - +
----------------------------------------------------------
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Residues in contact with LEU 86 (chain A).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
82A THR 2.9 13.2 + - - +
83A GLN* 3.2 34.7 + - - +
85A SER* 1.3 77.6 - - - +
87A LEU* 1.3 57.3 + - - +
89A ALA* 3.2 2.9 + - - +
90A GLU* 2.9 53.1 + - - +
82B THR* 4.3 8.1 - - + -
85B SER* 3.6 47.1 - - - +
86B LEU* 3.7 12.7 - - + +
89B ALA* 3.8 13.0 - - + -
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Residues in contact with LEU 87 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
83A GLN* 3.0 46.7 + - + +
84A ASP* 3.7 11.9 - - - +
85A SER 3.3 0.2 - - - -
86A LEU* 1.3 78.2 - - + +
88A GLN* 1.3 58.6 + - + +
90A GLU* 3.4 21.5 + - + +
91A THR* 2.9 32.4 + - - +
----------------------------------------------------------
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Residues in contact with GLN 88 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
84A ASP* 2.8 45.5 + - - +
85A SER* 3.4 15.7 + - - +
87A LEU* 1.3 75.6 - - + +
89A ALA* 1.3 63.4 + - - +
91A THR* 3.2 8.8 + - - -
92A GLN* 3.1 36.5 + - - +
----------------------------------------------------------
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Residues in contact with ALA 89 (chain A).
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----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
85A SER 2.9 12.9 + - - +
86A LEU 3.5 8.3 - - - +
88A GLN* 1.3 76.4 - - - +
90A GLU* 1.3 59.3 + - - +
92A GLN* 3.2 15.7 + - - +
93A ALA* 3.0 27.0 + - - +
86B LEU* 4.2 11.9 - - + -
89B ALA* 3.8 24.5 - - + +
90B GLU* 4.3 14.4 - - + -
93B ALA* 4.6 1.9 - - - +
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Residues in contact with GLU 90 (chain A).
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----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
86A LEU* 2.9 41.1 + - + +
87A LEU* 3.5 29.3 - - + +
89A ALA* 1.3 72.9 - - - +
91A THR* 1.3 61.2 + - - +
93A ALA* 3.3 7.5 + - - +
94A ASN* 3.0 29.1 + - - +
89B ALA* 4.0 10.8 - - + +
92B GLN* 6.0 2.0 - - - +
----------------------------------------------------------
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Residues in contact with THR 91 (chain A).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
87A LEU 2.9 21.3 + - - -
88A GLN* 3.5 12.0 - - - -
90A GLU* 1.3 76.4 - - - +
92A GLN* 1.3 63.8 + - + +
94A ASN* 3.3 7.9 + - - +
95A SER* 3.1 24.0 + - - -
----------------------------------------------------------
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Residues in contact with GLN 92 (chain A).
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----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
88A GLN* 3.1 27.5 + - - +
89A ALA* 3.5 13.3 - - - +
91A THR* 1.3 79.7 - - + +
93A ALA* 1.3 56.4 + - - +
95A SER* 3.3 5.8 + - - -
96A CYS* 2.9 31.3 + - - +
93B ALA* 4.8 13.6 - - + +
----------------------------------------------------------
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Residues in contact with ALA 93 (chain A).
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----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
89A ALA 3.0 15.9 + - - +
90A GLU* 3.7 8.7 - - - +
91A THR 3.3 0.2 - - - -
92A GLN* 1.3 76.8 - - - +
94A ASN* 1.3 57.2 + - - +
96A CYS* 3.4 6.6 + - - +
97A ASN* 3.0 29.6 + - - +
89B ALA* 4.6 2.0 - - - +
92B GLN* 3.9 38.3 + - + +
93B ALA* 4.4 15.8 - - - +
96B CYS* 4.5 3.3 - - + +
----------------------------------------------------------
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Residues in contact with ASN 94 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
90A GLU 3.0 16.6 + - - +
91A THR* 3.6 9.0 + - - +
92A GLN 3.2 0.2 - - - -
93A ALA* 1.3 78.5 - - - +
95A SER* 1.3 62.9 + - - +
97A ASN* 3.2 17.6 + - - +
98A LEU* 3.3 12.3 + - - +
92B GLN* 6.0 0.2 - - - +
----------------------------------------------------------
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Residues in contact with SER 95 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
91A THR* 3.1 17.9 + - - -
92A GLN* 3.8 6.1 - - - -
93A ALA 3.3 0.2 - - - -
94A ASN* 1.3 74.9 - - - +
96A CYS* 1.3 66.4 + - - +
98A LEU* 3.1 17.5 + - - +
99A THR* 3.2 16.4 + - - -
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Residues in contact with CYS 96 (chain A).
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----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
92A GLN 2.9 19.0 + - - +
93A ALA* 3.6 5.2 - - - +
95A SER* 1.3 77.1 - - - +
97A ASN* 1.3 56.3 + - - +
99A THR* 3.0 10.4 + - - -
100A VAL 2.9 23.9 + - - -
93B ALA* 4.6 2.2 - - + +
96B CYS* 2.0 60.4 - - + -
97B ASN* 3.7 14.8 - - - +
100B VAL* 3.7 12.1 - - - -
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Residues in contact with ASN 97 (chain A).
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----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
93A ALA 3.0 14.0 + - - +
94A ASN* 3.5 14.6 + - - +
95A SER 3.1 0.2 - - - -
96A CYS* 1.3 77.6 - - - +
98A LEU* 1.3 63.0 + - - +
100A VAL* 3.3 10.5 + - - +
101A VAL* 3.0 34.5 + - - +
92B GLN* 5.8 4.3 - - - +
96B CYS* 3.6 8.4 - - - -
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Residues in contact with LEU 98 (chain A).
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----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
94A ASN 3.3 7.5 + - - +
95A SER* 3.1 12.6 + - - +
97A ASN* 1.3 81.1 - - - +
99A THR* 1.3 58.1 + - - +
101A VAL* 3.2 14.8 + - + -
102A THR* 2.9 42.6 + - - +
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Residues in contact with THR 99 (chain A).
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----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
95A SER* 3.2 14.3 + - - -
96A CYS* 3.0 14.8 + - - -
98A LEU* 1.3 78.0 - - - +
100A VAL* 1.3 61.2 + - - +
102A THR* 3.3 6.7 + - - -
103A LEU* 3.0 41.8 + - + +
100B VAL* 4.1 15.3 - - + -
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Residues in contact with VAL 100 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
96A CYS 2.9 16.1 + - - +
97A ASN* 3.4 14.8 - - - +
98A LEU 3.2 0.2 - - - -
99A THR* 1.3 77.4 - - - +
101A VAL* 1.3 58.2 + - + +
103A LEU* 3.3 4.3 + - - +
104A GLN* 2.9 50.7 + - - +
96B CYS* 3.6 21.1 - - - +
99B THR* 3.9 23.3 - - + -
100B VAL* 3.7 15.9 - - + +
103B LEU* 3.7 13.6 - - + +
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Residues in contact with VAL 101 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
97A ASN* 3.0 31.3 + - - +
98A LEU* 3.2 18.8 + - + +
100A VAL* 1.3 76.1 - - + +
102A THR* 1.3 59.1 + - - +
104A GLN* 3.4 16.5 + - + +
105A GLU* 2.9 48.6 + - + +
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Residues in contact with THR 102 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
98A LEU* 2.9 29.0 + - - +
99A THR* 3.7 8.5 - - - -
101A VAL* 1.3 75.8 - - - +
103A LEU* 1.3 64.1 + - + +
105A GLU* 3.4 17.6 + - - +
106A SER* 3.1 23.1 + - - -
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Residues in contact with LEU 103 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
99A THR* 3.0 29.2 + - + +
100A VAL* 3.7 4.9 - - - +
102A THR* 1.3 75.7 - - + +
104A GLN* 1.3 60.8 + - - +
106A SER* 3.3 5.1 + - - -
107A LEU* 2.9 30.6 + - - +
100B VAL* 3.9 42.0 - - + +
103B LEU* 3.9 18.3 - - + +
104B GLN* 4.0 20.9 - - + +
107B LEU* 3.9 25.9 - - + +
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Residues in contact with GLN 104 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
100A VAL* 2.9 38.1 + - - +
101A VAL* 3.7 17.0 - - - +
103A LEU* 1.3 75.8 - - - +
105A GLU* 1.3 62.8 + - - +
107A LEU* 3.4 6.8 + - + +
108A GLU* 3.0 24.6 + - - +
99B THR* 5.3 3.0 - - - +
103B LEU* 3.7 22.8 - - + +
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Residues in contact with GLU 105 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
101A VAL* 2.9 37.6 + - + +
102A THR* 3.5 20.6 + - - +
103A LEU 3.2 0.2 - - - -
104A GLN* 1.3 77.9 - - + +
106A SER* 1.3 60.3 + - - +
108A GLU* 3.6 9.4 + - - +
109A LYS* 3.4 20.1 + - - +
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Residues in contact with SER 106 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
102A THR* 3.1 13.9 + - - -
103A LEU* 3.3 5.6 + - - -
105A GLU* 1.3 77.0 - - - +
107A LEU* 1.3 64.9 + - - +
109A LYS* 3.4 9.6 + - - +
110A LYS* 3.1 25.1 + - - +
107B LEU* 3.5 26.6 - - - +
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Residues in contact with LEU 107 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
103A LEU 2.9 17.1 + - - +
104A GLN* 3.8 6.7 - - + +
105A GLU 3.3 0.2 - - - -
106A SER* 1.3 75.8 - - - +
108A GLU* 1.3 59.6 + - - +
110A LYS 3.2 1.1 + - - +
111A VAL* 2.8 43.8 + - + +
103B LEU* 3.9 26.2 - - + +
106B SER* 4.0 15.3 - - - +
107B LEU* 3.9 38.1 - - + +
110B LYS* 4.0 21.3 - - + -
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Residues in contact with GLU 108 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
104A GLN 3.0 16.8 + - - +
105A GLU* 3.7 8.3 - - - +
107A LEU* 1.3 76.9 - - - +
109A LYS* 1.3 61.9 + - - +
111A VAL* 3.3 7.2 + - - +
112A SER* 3.0 33.8 + - - +
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Residues in contact with LYS 109 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
105A GLU 3.4 10.5 + - - +
106A SER* 3.5 11.9 - - - +
107A LEU 3.2 0.4 - - - -
108A GLU* 1.3 80.9 - - - +
110A LYS* 1.3 56.8 + - + +
112A SER* 3.4 5.3 + - - -
113A GLN* 3.0 62.0 + - + +
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Residues in contact with LYS 110 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
106A SER* 3.1 20.6 + - - +
107A LEU 3.2 3.8 + - - +
109A LYS* 1.3 75.2 - - + +
111A VAL* 1.3 60.7 + - - +
113A GLN* 3.2 22.6 + - + +
114A ALA* 2.9 30.5 + - - +
107B LEU* 4.0 17.0 - - + -
110B LYS* 4.1 23.7 - - + +
111B VAL* 4.2 30.7 - - + +
114B ALA* 4.3 18.2 - - + +
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Residues in contact with VAL 111 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
107A LEU* 2.8 35.9 + - + +
108A GLU* 3.8 6.7 - - - +
110A LYS* 1.3 73.8 - - - +
112A SER* 1.3 67.1 + - - +
114A ALA* 3.5 2.6 + - - +
115A LEU* 3.2 36.9 + - + +
110B LYS* 4.1 30.5 + - + +
----------------------------------------------------------
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Residues in contact with SER 112 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
108A GLU* 3.0 24.3 + - - +
109A LYS* 3.6 6.1 - - - -
111A VAL* 1.3 80.0 - - - +
113A GLN* 1.3 58.6 + - - +
115A LEU* 3.2 10.4 + - - +
116A GLU* 3.0 41.8 + - - +
----------------------------------------------------------
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Residues in contact with GLN 113 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
109A LYS* 3.0 61.2 + - + +
110A LYS* 3.2 39.7 - - + +
111A VAL 3.3 0.4 - - - -
112A SER* 1.3 78.8 - - - +
114A ALA* 1.3 57.8 + - - +
116A GLU* 3.4 18.5 + - - +
117A GLN* 3.0 39.0 + - + +
114B ALA* 5.7 2.9 - - + -
----------------------------------------------------------
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Residues in contact with ALA 114 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
110A LYS 2.9 17.5 + - - +
111A VAL 3.8 4.9 - - - +
113A GLN* 1.3 77.1 - - - +
115A LEU* 1.3 62.6 + - + +
117A GLN* 3.4 4.2 + - - +
118A GLN* 3.1 18.4 + - - +
110B LYS* 4.3 13.9 - - + +
113B GLN* 3.8 30.7 - - + +
114B ALA* 5.4 2.0 - - + +
117B GLN* 3.1 26.0 + - - +
----------------------------------------------------------
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Residues in contact with LEU 115 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
111A VAL* 3.2 28.1 + - + +
112A SER* 3.6 10.1 - - - +
114A ALA* 1.3 76.7 - - + +
116A GLU* 1.3 64.4 + - + +
118A GLN* 3.2 23.7 + - - +
119A ALA* 3.2 21.0 + - - +
110B LYS* 6.3 1.6 - - - +
----------------------------------------------------------
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Residues in contact with GLU 116 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
112A SER* 3.0 26.5 + - - +
113A GLN* 3.6 20.9 - - - +
114A ALA 3.3 0.2 - - - -
115A LEU* 1.3 75.0 - - - +
117A GLN* 1.3 63.1 + - + +
119A ALA* 3.3 9.6 + - - +
120A ARG* 3.1 21.3 + - - +
----------------------------------------------------------
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Residues in contact with GLN 117 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
113A GLN* 3.0 19.0 + - + +
114A ALA* 3.7 5.9 - - - -
116A GLU* 1.3 77.2 - - + +
118A GLN* 1.3 57.4 + - - +
120A ARG* 3.2 4.4 + - - +
121A ILE* 2.8 34.1 + - - +
114B ALA* 3.0 43.2 + - - +
117B GLN* 2.9 32.5 + - + +
118B GLN* 3.1 28.1 + - - +
121B ILE* 3.9 17.8 - - + +
----------------------------------------------------------
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Residues in contact with GLN 118 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
114A ALA 3.1 12.4 + - - +
115A LEU* 3.2 32.9 + - - +
117A GLN* 1.3 77.7 - - - +
119A ALA* 1.3 57.5 + - - +
121A ILE* 3.4 11.0 + - + +
122A LYS* 3.0 26.7 + - - +
113B GLN* 3.5 13.8 - - - +
117B GLN* 3.2 28.6 + - - +
----------------------------------------------------------
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Residues in contact with ALA 119 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
115A LEU 3.2 11.3 + - - +
116A GLU* 3.6 11.2 - - - +
117A GLN 3.3 0.2 - - - -
118A GLN* 1.3 77.7 - - - +
120A ARG* 1.3 55.7 + - - +
122A LYS* 3.3 12.7 + - - +
123A GLU* 3.0 27.4 + - - +
----------------------------------------------------------
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Residues in contact with ARG 120 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
116A GLU 3.1 13.1 + - - +
117A GLN* 3.2 11.4 + - - +
119A ALA* 1.3 75.6 - - - +
121A ILE* 1.3 59.8 + - - +
123A GLU* 3.1 35.2 + - - +
124A LEU* 2.9 64.9 + - + +
121B ILE* 4.0 16.5 - - + +
125B GLU* 3.1 27.3 + - - +
----------------------------------------------------------
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Residues in contact with ILE 121 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
117A GLN 2.8 22.1 + - - +
118A GLN* 3.6 10.5 - - + +
120A ARG* 1.3 75.1 - - - +
122A LYS* 1.3 59.3 + - - +
124A LEU* 3.3 2.8 + - - +
125A GLU* 2.9 49.1 + - - +
117B GLN* 3.8 37.7 - - + +
120B ARG* 4.2 22.9 - - + +
121B ILE* 3.6 17.5 - - + -
124B LEU* 3.9 15.9 - - + +
----------------------------------------------------------
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Residues in contact with LYS 122 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
118A GLN 3.0 13.4 + - - +
119A ALA* 3.5 13.0 + - - +
120A ARG 3.2 0.2 - - - -
121A ILE* 1.3 78.4 - - - +
123A GLU* 1.3 67.5 + - - +
125A GLU* 3.4 15.0 + - - +
126A ASN* 3.0 56.8 + - - +
----------------------------------------------------------
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Residues in contact with GLU 123 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
119A ALA 3.0 13.4 + - - +
120A ARG* 3.1 41.5 + - - +
122A LYS* 1.3 82.2 - - - +
124A LEU* 1.3 58.2 + - - +
126A ASN* 3.4 10.6 + - - +
127A GLU* 3.1 25.5 + - - +
----------------------------------------------------------
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Residues in contact with LEU 124 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
120A ARG* 2.9 61.2 + - + +
121A ILE 3.8 3.4 - - - +
123A GLU* 1.3 75.2 - - + +
125A GLU* 1.3 65.4 - - - +
127A GLU* 3.1 7.0 + - + +
128A VAL* 2.9 29.4 + - - +
121B ILE* 3.8 34.3 - - + +
124B LEU* 3.8 19.3 - - + -
125B GLU* 3.8 14.8 - - + -
128B VAL* 4.1 21.7 - - + +
----------------------------------------------------------
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Residues in contact with GLU 125 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
121A ILE* 2.9 30.7 + - - +
122A LYS* 3.6 18.6 - - - +
124A LEU* 1.3 77.6 - - - +
126A ASN* 1.3 64.2 + - - +
128A VAL* 3.3 5.3 + - - +
129A THR* 3.0 28.3 + - - +
120B ARG* 3.8 20.5 + - - +
124B LEU* 4.1 21.5 - - + +
----------------------------------------------------------
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Residues in contact with ASN 126 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
122A LYS* 3.0 52.9 + - - +
123A GLU* 3.6 7.0 - - - +
124A LEU 3.2 0.2 - - - -
125A GLU* 1.3 80.0 - - - +
127A GLU* 1.3 56.3 + - - +
129A THR* 3.4 8.0 + - - -
130A LYS* 3.0 27.7 + - - +
----------------------------------------------------------
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Residues in contact with GLU 127 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
123A GLU 3.1 13.1 + - - +
124A LEU* 3.1 12.6 + - + +
126A ASN* 1.3 76.3 - - - +
128A VAL* 1.3 60.2 + - - +
130A LYS* 3.1 18.6 + - - +
131A LEU* 2.9 56.6 + - + +
128B VAL* 4.1 18.9 - - + +
132B ASN* 5.2 2.1 - - - +
----------------------------------------------------------
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Residues in contact with VAL 128 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
124A LEU 2.9 17.2 + - - +
125A GLU* 3.3 8.5 + - - +
127A GLU* 1.3 74.9 - - - +
129A THR* 1.3 58.8 + - - +
131A LEU* 3.5 0.8 + - - -
132A ASN* 3.0 46.4 + - - +
124B LEU* 4.0 23.3 - - + +
127B GLU* 4.1 21.3 - - + +
128B VAL* 3.8 20.6 - - + +
131B LEU* 3.9 14.7 - - + +
----------------------------------------------------------
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Residues in contact with THR 129 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
125A GLU 3.0 15.4 + - - -
126A ASN* 3.5 12.3 + - - -
127A GLU 3.2 0.2 - - - -
128A VAL* 1.3 78.2 - - - +
130A LYS* 1.3 62.2 + - - +
132A ASN* 3.4 7.8 + - - +
133A GLN* 3.0 26.1 + - + +
----------------------------------------------------------
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Residues in contact with LYS 130 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
126A ASN 3.0 14.4 + - - +
127A GLU* 3.4 23.8 - - - +
129A THR* 1.3 78.4 - - - +
131A LEU* 1.3 65.0 + - + +
133A GLN* 3.2 8.3 + - - +
134A GLU* 3.1 47.4 + - + +
----------------------------------------------------------
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Residues in contact with LEU 131 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
127A GLU* 2.9 38.1 + - + +
130A LYS* 1.3 73.9 - - + +
132A ASN* 1.3 67.0 + - - +
134A GLU* 3.2 17.6 + - - +
135A LEU* 3.0 28.6 + - - +
128B VAL* 3.7 40.8 - - + +
131B LEU* 4.0 25.4 - - + -
132B ASN* 3.9 17.7 - - - +
135B LEU* 3.8 21.1 - - + +
----------------------------------------------------------
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Residues in contact with ASN 132 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
128A VAL* 3.0 39.8 + - - +
129A THR* 3.7 7.0 - - - +
130A LYS 3.3 0.2 - - - -
131A LEU* 1.3 77.1 - - - +
133A GLN* 1.3 57.8 + - - +
135A LEU* 3.5 7.6 + - - +
136A GLU* 2.9 30.0 + - - +
139A ARG* 4.9 1.0 + - - -
127B GLU* 5.1 2.7 + - - +
131B LEU* 3.5 24.0 - - - +
----------------------------------------------------------
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Residues in contact with GLN 133 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
129A THR* 3.0 18.0 + - + +
130A LYS* 3.2 10.1 + - - +
132A ASN* 1.3 75.4 - - - +
134A GLU* 1.3 61.6 + - + +
136A GLU* 4.0 14.3 - - - +
137A ASN* 2.8 65.6 + - - +
140A ILE* 5.4 1.6 - - - +
----------------------------------------------------------
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Residues in contact with GLU 134 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
130A LYS* 3.1 40.2 + - + +
131A LEU* 3.5 18.5 - - - +
133A GLN* 1.3 76.1 - - + +
135A LEU* 1.3 63.5 + - - +
137A ASN* 3.3 11.5 + - - +
138A LEU* 3.2 25.8 + - - +
135B LEU* 3.5 18.3 - - + +
139B ARG* 3.1 34.1 + - - +
----------------------------------------------------------
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Residues in contact with LEU 135 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
131A LEU 3.0 20.8 + - - +
132A ASN* 3.7 10.1 - - - +
134A GLU* 1.3 71.9 - - - +
136A GLU* 1.3 66.2 + - - +
138A LEU* 3.2 6.8 + - - +
139A ARG* 3.1 47.5 + - - +
131B LEU* 3.5 38.6 - - + +
134B GLU* 3.8 14.8 - - + +
135B LEU* 3.5 32.1 - - + +
138B LEU* 3.7 28.6 - - + +
----------------------------------------------------------
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Residues in contact with GLU 136 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
132A ASN 2.9 18.8 + - - +
133A GLN* 3.6 22.0 - - - +
134A GLU 3.3 0.2 - - - -
135A LEU* 1.3 76.0 - - - +
137A ASN* 1.3 58.6 + - - +
139A ARG* 2.9 36.7 + - - +
140A ILE* 2.9 47.1 + - + +
----------------------------------------------------------
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Residues in contact with ASN 137 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
133A GLN* 2.8 52.9 + - - +
134A GLU* 3.5 11.6 - - - +
135A LEU 3.2 0.2 - - - -
136A GLU* 1.3 77.7 - - - +
138A LEU* 1.3 56.9 + - + +
140A ILE* 3.3 14.3 + - - +
141A GLN* 2.9 42.6 + - - +
----------------------------------------------------------
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Residues in contact with LEU 138 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
134A GLU 3.2 10.5 + - - +
135A LEU* 3.2 7.8 + - - +
137A ASN* 1.3 78.3 - - - +
139A ARG* 1.3 63.9 + - + +
141A GLN* 3.3 20.9 + - + +
142A LYS* 3.1 21.3 + - - +
135B LEU* 3.7 29.2 - - + -
138B LEU* 4.3 30.3 - - + -
139B ARG* 4.6 20.4 - - + +
142B LYS* 5.1 24.0 - - + -
----------------------------------------------------------
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Residues in contact with ARG 139 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
132A ASN 4.9 1.4 + - - -
135A LEU* 3.1 38.5 + - - +
136A GLU* 2.9 46.4 + - - +
138A LEU* 1.3 76.9 - - + +
140A ILE* 1.3 59.2 + - + +
142A LYS* 3.4 9.2 + - - +
143A GLU* 2.9 27.9 + - - +
134B GLU* 5.1 4.8 + - - -
138B LEU* 6.5 0.9 - - + -
----------------------------------------------------------
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Residues in contact with ILE 140 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
133A GLN* 5.4 1.1 - - - +
136A GLU* 2.9 37.8 + - + +
137A ASN* 3.7 14.6 - - - +
138A LEU 3.3 0.2 - - - -
139A ARG* 1.3 75.7 - - + +
141A GLN* 1.3 61.2 + - + +
143A GLU* 3.2 19.1 + - - +
144A THR* 2.9 45.8 + - + +
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Residues in contact with GLN 141 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
137A ASN* 2.9 32.7 + - - +
138A LEU* 3.6 21.9 - - + +
139A ARG 3.3 0.2 - - - -
140A ILE* 1.3 78.1 - - + +
142A LYS* 1.3 59.8 + - - +
144A THR* 3.4 9.1 + - - -
145A SER* 3.1 24.4 + - - -
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Residues in contact with LYS 142 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
138A LEU 3.1 13.1 + - - +
139A ARG* 3.6 10.5 - - - +
141A GLN* 1.3 75.0 - - - +
143A GLU* 1.3 64.8 + - - +
145A SER* 2.8 27.6 + - - +
142B LYS* 5.1 16.2 - - - +
----------------------------------------------------------
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Residues in contact with GLU 143 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
139A ARG 2.9 14.0 + - - +
140A ILE* 3.4 23.8 - - - +
142A LYS* 1.3 77.7 - - - +
144A THR* 1.3 71.2 + - + +
145A SER 3.7 0.3 + - - -
146A SER 4.9 1.6 + - - -
147A THR* 4.3 5.4 + - - -
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Residues in contact with THR 144 (chain A).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
140A ILE* 2.9 32.4 + - + +
141A GLN* 3.4 10.7 + - - -
142A LYS 3.1 0.2 - - - -
143A GLU* 1.3 88.9 - - - +
145A SER* 1.3 61.5 + - - +
146A SER 3.0 7.2 + - - -
147A THR* 3.1 30.7 + - + +
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A short description of the
analytical approach
The contact analysis used in this page
is based upon the approach
developed in:
Sobolev V., Wade R.C., Vriend G.
and Edelman M. PROTEINS (1996)
25, 120-129.
Contact legitimacy depends on the hydrophobic-hydrophilic
properties of the contacting atoms. In order to
define it, for each inter-atomic contact,
eight atom classes have been introduced:
I Hydrophilic - N and O that can donate and accept hydrogen bonds
(e.g., oxygen of hydroxyl group of Ser. or Thr)
II Acceptor - N or O that can only accept a hydrogen bond
III Donor - N that can only donate a hydrogen bond
IV Hydrophobic - Cl, Br, I and all C atoms that are not in
aromatic rings and do not have a covalent bond to
a N or O atom
V Aromatic - C in aromatic rings irrespective of any other
bonds formed by the atom
VI Neutral - C atoms that have a covalent bond to at least one
atom of class I or two or more atoms from class II
or III; atoms; S, F, P, and metal atoms in all cases
VII Neutral-donor - C atoms that have a covalent bond with only one
atom of class III
VIII Neutral-acceptor - C atoms that have a covalent bond with only
one atom of class II
For each pair of contacts the state of legitimacy
is shown below:
Legend:
+, legitimate
-, illegitimate
------------------------------------------------------------
Atomic class I II III IV V VI VII VIII
------------------------------------------------------------
I (Hydrophilic) + + + - + + + +
II (Acceptor) + - + - + + + -
III (Donor) + + - - + + - +
IV (Hydrophobic) - - - + + + + +
V (Aromatic) + + + + + + + +
VI (Neutral) + + + + + + + +
VII (Neutral-donor) + + - + + + - +
VIII (Neutral-acceptor) + - + + + + + -
------------------------------------------------------------
Warning!
Atom classes for heterogroups are automatically
assigned based on the atomic coordinates. However, in
three cases (see below) the automatic assignment
is currently ambiguous. In these
cases, the user is advised to manually analyse
the full list of contacts using
LPC software.
1. Carbon atoms belonging to a 4-, 5- or 6-member ring are
considered "aromatic" (Class V) if the ring is approximately
planar, and "hydrophobic" (Class IV) or "neutral" (Classes
VI, VII, VIII) if the ring is non-planar.
2. The oxygen atom of a carbonyl or hydroxy group is considered
"hydroxy" (Class I) if the CO bond is longer than 1.29 Å, and
"carbonyl" (Class II) if shorter.
3. All nitrogen atoms are considered "hydrophilic" (Class I).
Please E-mail any
questions and/or suggestions concerning this page to
Vladimir.Sobolev@weizmann.ac.il