Contacts of the helix formed by residues 148 - 209 (chain C) in PDB entry 4CKG
Residue contacts within the protein are
derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332). A
short description of the analytical approach
is given at the end of the page.
Note:
Non-standard 3 letter residue
codes indicate a heterogroup. To identify
and analyse, use LPC software
Legend:
Dist - nearest distance (Å) between atoms of two residues
Surf - contact surface area (Å2) between two residues
HB - hydrophilic-hydrophilic contact (hydrogen bond)
Arom - aromatic-aromatic contact
Phob - hydrophobic-hydrophobic contact
DC - hydrophobic-hydrophilic contact (destabilizing contact)
+/- - indicates presence/absence of a specific contacts
* - indicates residues forming contacts by their side chain
(including CA atoms)
Residues in contact with ARG 148 (chain C).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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103A HIS* 5.9 1.6 + - - -
144C VAL* 4.0 7.6 - - + +
145C PRO* 2.9 36.0 + - - +
147C ARG* 1.3 96.6 - - + +
149C ALA* 1.4 57.2 + - - +
150C GLN 3.5 2.7 - - - -
151C GLU* 2.7 50.3 + - + +
152C ALA* 3.1 25.9 + - - +
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Residues in contact with ALA 149 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
146C ARG 4.0 11.2 + - - +
147C ARG 3.1 8.4 + - - +
148C ARG* 1.4 70.6 - - - +
150C GLN* 1.3 68.3 + - + +
152C ALA* 3.5 7.1 + - - +
153C GLU* 3.0 26.5 + - - +
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Residues in contact with GLN 150 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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148C ARG 3.5 1.2 - - - -
149C ALA* 1.3 82.0 - - + +
151C GLU* 1.4 59.9 + - + +
153C GLU* 3.4 7.2 + - - +
154C GLU* 3.1 28.8 + - - +
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Residues in contact with GLU 151 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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103A HIS* 4.6 17.8 + - + +
144C VAL* 4.6 6.3 - - + -
148C ARG* 2.7 63.0 + - + +
150C GLN* 1.4 73.5 - - + +
152C ALA* 1.4 62.2 + - - +
154C GLU* 3.4 20.8 - - - +
155C ALA* 2.9 26.9 + - - +
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Residues in contact with ALA 152 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
141C ASN* 4.5 0.5 - - - +
144C VAL* 3.7 34.2 - - + +
145C PRO 5.0 1.6 - - - +
146C ARG* 6.1 0.4 - - - -
148C ARG 3.1 17.1 + - - +
149C ALA* 3.6 9.2 - - - +
151C GLU* 1.4 74.0 - - - +
153C GLU* 1.4 58.2 + - - +
155C ALA* 3.2 5.0 + - - +
156C GLY* 2.9 26.0 + - - -
326D ARG* 3.7 25.6 + - - +
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Residues in contact with GLU 153 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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149C ALA 3.0 18.5 + - - +
150C GLN* 3.4 8.3 + - - +
152C ALA* 1.4 73.7 - - - +
154C GLU* 1.3 55.9 + - - +
156C GLY* 3.4 2.8 + - - +
157C ALA* 2.9 28.4 + - - +
326D ARG* 4.9 1.3 - - - +
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Residues in contact with GLU 154 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
103A HIS* 5.3 4.7 - - - -
107A GLN* 2.9 33.3 + - - +
150C GLN 3.1 13.9 + - - +
151C GLU* 3.4 25.5 - - - +
153C GLU* 1.3 70.4 - - - +
155C ALA* 1.3 67.0 + - - +
157C ALA* 3.2 21.3 - - - +
158C ALA* 3.2 9.0 + - - +
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Residues in contact with ALA 155 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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137C ALA* 4.9 4.3 - - - +
140C HIS* 3.9 31.9 - - + +
141C ASN* 4.6 4.9 - - - +
144C VAL* 5.7 1.3 - - + -
151C GLU 2.9 16.5 + - - +
152C ALA* 3.2 10.5 + - - +
154C GLU* 1.3 78.9 - - - +
156C GLY* 1.4 55.7 + - - +
158C ALA* 3.4 9.9 + - - +
159C LEU* 3.1 24.8 + - - +
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Residues in contact with GLY 156 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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141C ASN* 3.6 19.6 + - - -
152C ALA 2.9 15.9 + - - -
153C GLU* 3.4 4.7 + - - -
155C ALA* 1.4 70.0 - - - +
157C ALA* 1.4 58.5 + - - +
159C LEU* 3.4 8.8 + - - +
160C ARG* 2.9 35.2 + - - +
326D ARG* 5.7 0.4 - - - -
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Residues in contact with ALA 157 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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153C GLU 2.9 13.7 + - - +
154C GLU* 3.2 15.9 - - - +
156C GLY* 1.4 71.4 - - - +
158C ALA* 1.4 61.8 + - - +
160C ARG* 3.1 12.7 + - - +
161C THR* 3.1 22.6 + - - -
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Residues in contact with ALA 158 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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137C ALA* 4.6 5.1 - - + +
154C GLU 3.2 9.1 + - - +
155C ALA* 3.5 12.1 - - - +
157C ALA* 1.4 78.4 - - - +
159C LEU* 1.4 55.0 + - - +
161C THR* 3.2 11.7 + - - -
162C ALA* 2.8 28.5 + - - +
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Residues in contact with LEU 159 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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134C LEU* 3.8 26.2 - - + -
137C ALA* 4.0 22.7 - - + +
138C LEU* 4.1 16.6 - - + -
141C ASN* 3.5 33.7 - - + +
155C ALA 3.1 13.5 + - - +
156C GLY* 3.4 11.2 - - - +
157C ALA 3.4 0.2 - - - -
158C ALA* 1.4 71.5 - - - +
160C ARG* 1.3 66.7 + - - +
162C ALA* 4.2 3.1 - - - -
163C ARG* 2.9 30.0 + - - +
254D GLU* 4.0 29.2 - - + +
343D ASP* 5.0 2.0 - - + +
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Residues in contact with ARG 160 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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156C GLY 2.9 23.8 + - - +
157C ALA* 3.1 12.3 + - - +
159C LEU* 1.3 80.6 - - - +
161C THR* 1.3 57.4 + - - +
164C ALA* 3.1 30.5 + - - +
252D GLY* 3.4 23.5 + - - +
253D GLU* 2.6 54.2 + - - +
254D GLU* 3.8 12.9 + - - +
344D SER* 5.6 6.3 - - - -
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Residues in contact with THR 161 (chain C).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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157C ALA 3.1 13.7 + - - -
158C ALA* 3.2 16.3 - - - -
159C LEU 3.2 0.2 - - - -
160C ARG* 1.3 74.6 - - - +
162C ALA* 1.4 51.0 + - - +
164C ALA* 4.0 2.3 - - - +
165C GLY* 2.8 32.6 + - - -
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Residues in contact with ALA 162 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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130C GLY* 4.8 1.7 - - - +
133C SER* 4.1 13.0 - - - +
134C LEU* 4.1 18.4 - - + +
137C ALA* 3.5 32.1 - - + -
158C ALA 2.8 13.5 + - - +
159C LEU 3.4 3.1 + - - +
161C THR* 1.4 69.5 - - - +
163C ARG* 1.4 53.8 - - - +
165C GLY* 3.8 0.3 - - - -
166C TYR* 2.8 37.5 + - - +
169C ARG* 5.9 0.3 + - - -
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Residues in contact with ARG 163 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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11C LEU 5.5 1.2 + - - -
13C ASP* 4.1 23.2 + - - +
134C LEU* 3.4 45.5 - - + +
138C LEU* 4.0 12.7 - - - +
159C LEU 2.9 18.2 + - - +
162C ALA* 1.4 74.5 - - - +
164C ALA* 1.4 64.1 + - - +
166C TYR* 3.6 8.1 + - - +
167C ARG* 3.1 49.8 + - - +
251D GLY 4.6 0.2 - - - -
252D GLY 3.7 10.3 - - - +
253D GLU 3.6 18.8 - - - +
254D GLU* 2.7 41.3 + - - +
255D PRO* 3.8 12.9 - - - +
271D HIS* 6.0 3.0 - - - -
285D ARG* 5.1 4.6 - - - +
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Residues in contact with ALA 164 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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160C ARG 3.1 19.5 + - - +
161C THR* 4.0 3.4 - - - +
163C ARG* 1.4 74.6 - - - +
165C GLY* 1.3 66.9 + - - +
167C ARG* 3.1 6.7 + - - +
168C GLY 3.0 18.5 + - - -
250D LEU* 3.6 18.7 - - + +
251D GLY 3.8 13.0 - - - +
252D GLY* 3.8 14.7 - - - +
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Residues in contact with GLY 165 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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161C THR 2.8 21.3 + - - -
162C ALA 4.0 0.2 - - - -
164C ALA* 1.3 75.8 - - - +
166C TYR* 1.4 57.1 + - - +
168C GLY* 3.4 4.1 + - - -
169C ARG* 2.8 41.3 + - - +
250D LEU* 5.2 2.2 - - - -
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Residues in contact with TYR 166 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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10C CYS 6.0 1.3 - - - -
13C ASP* 2.6 40.7 + - + -
17C PHE* 5.0 3.1 - + - -
18C ARG* 3.4 17.3 + - - -
21C ILE* 5.0 1.0 - - - +
127C PHE* 3.6 47.5 - + - -
130C GLY* 3.7 27.1 - - - +
131C ALA* 3.8 14.7 - - + +
134C LEU* 4.0 17.3 - - + -
162C ALA 2.8 19.5 + - - +
163C ARG* 3.8 12.1 - - - +
165C GLY* 1.4 78.1 - - - +
167C ARG* 1.3 59.2 + - + +
169C ARG* 3.8 8.0 - - + +
170C ALA* 2.9 30.5 + - + +
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Residues in contact with ARG 167 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
11C LEU* 2.9 49.5 + - + +
12C LYS* 4.9 1.0 - - - +
163C ARG* 3.1 27.1 + - - +
164C ALA 3.1 8.5 + - - +
166C TYR* 1.3 76.5 - - + +
168C GLY* 1.3 57.2 + - - +
170C ALA* 3.3 7.9 + - - +
171C LEU* 3.0 34.0 + - - +
250D LEU* 3.8 15.3 - - + -
251D GLY* 2.7 48.7 + - - +
253D GLU* 2.7 30.0 + - - +
255D PRO* 3.7 28.5 - - - +
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Residues in contact with GLY 168 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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164C ALA 3.0 11.5 + - - -
165C GLY* 3.5 6.5 - - - -
167C ARG* 1.3 76.9 - - - +
169C ARG* 1.3 57.8 + - - +
170C ALA 3.5 0.2 + - - -
171C LEU* 3.6 2.3 + - - +
172C ASP* 3.3 24.7 + - - +
246D LYS* 3.3 23.1 - - - -
250D LEU* 3.9 16.8 - - - +
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Residues in contact with ARG 169 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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115A GLU* 5.5 1.2 + - - -
118A ARG* 4.6 5.7 - - - +
123C ALA 5.1 1.8 - - - +
126C ASP* 2.6 60.3 + - + +
127C PHE* 3.9 23.1 - - + +
129C ARG* 3.9 15.2 - - - +
130C GLY* 3.5 25.4 - - - +
133C SER* 4.9 7.1 - - - -
162C ALA 5.9 0.4 + - - -
165C GLY* 2.8 29.0 + - - +
166C TYR* 3.9 6.9 - - + +
168C GLY* 1.3 67.5 - - - +
170C ALA* 1.3 62.9 + - - +
172C ASP* 3.3 22.2 + - - +
173C TYR* 3.3 13.7 + - - +
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Residues in contact with ALA 170 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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10C CYS* 3.5 35.7 - - - +
11C LEU* 5.3 0.9 - - + -
17C PHE* 4.7 0.8 - - + -
127C PHE* 3.5 24.9 - - + -
166C TYR* 2.9 24.4 + - + +
167C ARG* 3.3 8.7 + - - +
169C ARG* 1.3 71.6 - - - +
171C LEU* 1.4 57.4 + - - +
173C TYR* 3.4 5.5 + - - +
174C ALA* 3.0 27.0 + - - +
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Residues in contact with LEU 171 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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10C CYS* 4.5 4.5 - - + -
11C LEU* 3.9 23.3 - - + -
167C ARG 3.0 20.9 + - - +
168C GLY* 3.8 4.9 - - - +
170C ALA* 1.4 75.7 - - - +
172C ASP* 1.4 58.2 + - - +
174C ALA* 3.2 8.8 - - + +
175C LEU 2.8 24.4 + - - -
242D HIS* 3.5 36.2 + - + +
245D LEU* 4.0 32.8 - - + -
246D LYS* 4.2 17.3 - - + -
250D LEU* 3.9 23.3 - - + -
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Residues in contact with ASP 172 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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123C ALA* 4.5 13.9 - - + -
168C GLY 3.3 7.9 - - - +
169C ARG* 3.3 16.4 + - - +
170C ALA 3.3 0.8 - - - -
171C LEU* 1.4 73.3 - - - +
173C TYR* 1.3 60.0 + - - +
175C LEU* 3.4 10.0 + - - +
176C GLN* 3.0 39.4 + - + +
242D HIS* 5.4 2.0 + - - +
246D LYS* 2.7 38.1 + - - -
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Residues in contact with TYR 173 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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5C LEU* 4.1 24.9 - - + -
10C CYS* 5.9 0.4 - - - -
17C PHE* 5.4 4.0 - + - -
21C ILE* 3.3 36.5 + - + -
24C VAL* 3.4 13.2 - - - +
25C GLU* 4.9 4.0 - - - +
120C PHE* 3.4 38.1 - + - -
123C ALA* 4.4 8.2 - - + +
124C ARG* 4.4 24.7 - - + -
127C PHE* 3.8 34.8 - + + -
128C TRP* 5.8 1.1 - - - -
169C ARG 3.3 9.2 + - - +
170C ALA* 3.6 10.1 - - - +
171C LEU 3.4 0.2 - - - -
172C ASP* 1.3 79.7 - - - +
174C ALA* 1.3 57.3 + - - +
176C GLN* 3.3 0.4 + - - -
177C ILE* 3.1 34.4 + - + +
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Residues in contact with ALA 174 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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5C LEU* 5.6 2.2 - - + -
7C PHE* 4.2 16.5 - - + -
10C CYS* 3.8 18.8 - - - -
170C ALA 3.0 14.4 + - - +
171C LEU* 3.2 16.2 - - + +
173C TYR* 1.3 74.2 - - - +
175C LEU* 1.3 64.1 + - - +
177C ILE* 3.5 10.1 - - - +
178C ASN* 3.1 24.6 + - - +
238D MET* 4.3 4.2 - - + +
242D HIS* 4.8 5.2 - - + -
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Residues in contact with LEU 175 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
171C LEU 2.8 16.8 + - - +
172C ASP* 3.6 13.7 - - - +
174C ALA* 1.3 70.9 - - - +
176C GLN* 1.4 68.0 + - + +
178C ASN* 3.2 5.5 + - - +
179C VAL* 3.0 36.9 + - + +
235D LYS* 3.6 24.7 - - - +
238D MET* 3.8 30.1 - - + -
239D GLU* 3.9 38.6 - - + +
242D HIS* 4.1 11.1 - - + +
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Residues in contact with GLN 176 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
119C GLY* 3.9 25.6 + - - +
120C PHE* 3.8 36.0 + - + +
123C ALA* 4.5 4.7 - - + +
172C ASP* 3.0 25.5 + - + +
173C TYR* 3.3 0.6 + - - +
174C ALA 3.3 0.2 - - - -
175C LEU* 1.4 84.7 - - + +
177C ILE* 1.3 64.6 + - - +
179C VAL* 3.5 18.4 - - - +
180C ILE* 3.4 20.4 + - - +
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Residues in contact with ILE 177 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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1C MET* 3.6 44.0 - - + +
5C LEU* 4.3 21.1 - - + -
7C PHE* 4.8 5.2 - - + -
24C VAL* 3.9 20.9 - - + -
120C PHE* 3.5 31.7 - - + -
173C TYR* 3.1 23.3 + - + +
174C ALA* 3.5 12.8 - - - +
176C GLN* 1.3 73.4 - - - +
178C ASN* 1.4 66.2 + - + +
180C ILE* 3.2 22.8 + - + +
181C GLU* 3.3 7.5 + - + +
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Residues in contact with ASN 178 (chain C).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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2C THR* 5.4 4.4 - - - +
7C PHE* 3.7 25.4 - - + -
174C ALA 3.1 16.5 + - - +
175C LEU 3.2 7.6 + - - +
177C ILE* 1.4 81.3 - - - +
179C VAL* 1.3 61.3 + - - +
181C GLU* 4.0 4.7 + - - +
182C ASP* 3.8 9.4 + - - +
234D GLU* 4.2 2.8 - - - +
235D LYS* 2.8 49.2 + - - -
238D MET* 3.4 33.9 - - - +
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Residues in contact with VAL 179 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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175C LEU* 3.0 25.7 + - + +
176C GLN* 3.5 21.1 - - - +
178C ASN* 1.3 77.1 - - - +
180C ILE* 1.4 59.5 + - + +
182C ASP* 3.4 3.5 + - - +
183C LYS* 2.9 41.9 + - + +
235D LYS* 3.7 35.6 - - + +
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Residues in contact with ILE 180 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
1C MET* 3.9 20.9 - - + -
28C VAL* 5.7 0.9 - - + -
31C LEU* 4.9 11.4 - - + -
112C LEU* 5.3 10.1 - - + -
116C GLY* 4.5 15.9 - - - +
117C LEU* 4.6 18.2 - - + -
120C PHE* 5.3 10.3 - - + -
176C GLN 3.4 5.1 + - - +
177C ILE* 3.2 28.0 + - + +
179C VAL* 1.4 79.4 - - + +
181C GLU* 1.4 57.4 + - - +
183C LYS* 4.3 14.4 - - + +
184C ARG* 2.9 56.2 + - + +
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Residues in contact with GLU 181 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
-1C GLY* 3.3 9.3 - - - -
0C SER 3.1 21.2 + - - -
1C MET* 2.8 30.0 + - + +
2C THR* 3.3 26.5 - - - +
177C ILE 3.3 14.3 + - - +
178C ASN* 4.4 5.4 - - - +
179C VAL 3.4 0.2 - - - -
180C ILE* 1.4 79.0 - - - +
182C ASP* 1.4 66.0 + - - +
184C ARG* 2.9 32.5 + - - +
185C LYS* 4.1 10.6 + - - +
71D PRO* 3.5 19.2 - - - +
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Residues in contact with ASP 182 (chain C).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
178C ASN* 3.8 3.1 + - - +
179C VAL 3.4 3.5 + - - +
181C GLU* 1.4 79.9 - - - +
183C LYS* 1.3 59.2 + - - +
185C LYS* 3.1 40.5 + - - +
186C PHE* 3.2 25.2 - - + -
231D SER* 3.8 13.1 + - - +
234D GLU* 4.3 7.1 - - - +
235D LYS* 2.8 40.9 + - - -
----------------------------------------------------------
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Residues in contact with LYS 183 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
112C LEU* 4.0 17.4 - - + +
116C GLY* 5.5 8.7 - - - +
179C VAL* 2.9 32.9 + - + +
180C ILE* 3.3 11.6 + - + +
182C ASP* 1.3 74.6 - - - +
184C ARG* 1.4 63.3 + - - +
185C LYS 3.2 1.0 + - - -
186C PHE* 3.4 11.5 + - + +
187C ASP* 2.6 54.5 + - - +
228D VAL* 6.0 4.0 - - + -
231D SER* 5.5 0.2 + - - -
----------------------------------------------------------
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Residues in contact with ARG 184 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
0C SER* 3.7 6.9 - - - -
1C MET* 3.5 18.4 - - - +
27C GLU* 2.6 34.3 + - - +
31C LEU* 3.8 33.0 - - + +
112C LEU* 5.3 10.1 - - + -
180C ILE* 2.9 34.5 + - + +
181C GLU* 2.9 49.9 + - - +
183C LYS* 1.4 70.1 - - - +
185C LYS* 1.4 63.6 + - + +
187C ASP* 4.6 0.5 - - - +
188C ILE* 3.2 32.6 + - - +
69D LEU* 3.6 32.9 + - - +
70D GLY* 4.2 9.5 - - - +
71D PRO* 5.5 2.7 - - + -
----------------------------------------------------------
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Residues in contact with LYS 185 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
-1C GLY* 6.0 2.0 - - - -
181C GLU* 4.1 10.2 + - - +
182C ASP* 3.1 32.5 + - - +
184C ARG* 1.4 80.3 - - + +
186C PHE* 1.3 90.5 + - + +
188C ILE* 3.5 8.5 - - - +
189C MET* 2.9 31.4 + - - +
71D PRO* 4.5 16.2 - - + +
73D GLU* 2.7 37.3 + - - +
75D MET* 5.6 0.2 - - + -
76D MET* 3.6 26.0 - - + +
----------------------------------------------------------
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Residues in contact with PHE 186 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
182C ASP* 3.2 36.8 - - + -
183C LYS* 3.8 9.0 - - + +
185C LYS* 1.3 106.0 - - + +
187C ASP* 1.3 61.7 - - + +
189C MET* 3.3 3.5 + - - +
190C GLU* 2.9 30.4 + - - +
75D MET* 4.4 5.2 - - + -
224D LEU* 3.7 30.8 - - + +
227D LEU* 3.7 29.6 - - + -
228D VAL* 3.8 29.6 - - + -
231D SER* 4.1 24.7 - - - -
----------------------------------------------------------
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Residues in contact with ASP 187 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
108C GLN* 4.2 19.6 + - + +
109C ILE* 5.5 0.9 - - + -
112C LEU* 3.5 27.4 - - + +
183C LYS* 2.6 55.1 + - - +
184C ARG 4.8 0.2 - - - +
185C LYS 3.5 0.2 - - - -
186C PHE* 1.3 79.2 - - - +
188C ILE* 1.4 57.9 + - - +
190C GLU* 3.2 21.8 + - - +
191C PHE* 2.9 25.9 + - - +
----------------------------------------------------------
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Residues in contact with ILE 188 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
31C LEU* 6.1 1.3 - - + -
35C LEU* 4.5 3.1 - - + -
109C ILE* 4.2 18.2 - - + -
112C LEU* 4.4 12.1 - - + -
184C ARG 3.2 24.2 + - - +
185C LYS* 3.5 10.1 - - - +
187C ASP* 1.4 73.1 - - - +
189C MET* 1.3 67.3 + - - +
191C PHE* 3.5 9.7 - - + +
192C VAL* 3.1 29.2 + - + +
63D ILE 5.4 0.4 - - - +
66D LEU* 3.9 48.7 - - + -
67D ALA* 5.7 0.2 - - - -
76D MET* 5.0 2.0 - - - -
80D LEU* 3.7 30.3 - - + -
----------------------------------------------------------
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Residues in contact with MET 189 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
185C LYS 2.9 22.0 + - - +
186C PHE* 3.4 7.2 - - - +
188C ILE* 1.3 76.3 - - - +
190C GLU* 1.3 54.8 + - - +
192C VAL* 3.3 2.0 + - - +
193C LEU* 2.9 37.3 + - + +
75D MET* 3.7 29.2 - - + +
76D MET* 3.9 14.6 - - + -
79D CYS* 4.1 0.9 - - + -
80D LEU* 3.9 31.9 - - + +
83D PHE* 4.0 14.6 - - - -
220D LEU* 3.3 32.8 - - + -
224D LEU* 3.8 24.2 - - + -
----------------------------------------------------------
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Residues in contact with GLU 190 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
107C GLN* 4.8 2.6 - - - +
108C GLN* 3.4 28.9 + - + -
186C PHE 2.9 16.0 + - - +
187C ASP* 3.2 25.9 - - - +
189C MET* 1.3 68.8 - - - +
191C PHE* 1.4 58.6 - - - +
193C LEU* 3.3 8.1 + - + +
194C ARG* 3.0 46.0 + - - +
224D LEU* 3.9 14.7 - - + +
225D HIS* 6.0 5.0 - - - -
----------------------------------------------------------
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Residues in contact with PHE 191 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
38C LEU* 4.6 15.7 - - + -
101C THR* 5.0 1.3 - - + -
104C THR* 3.3 32.8 - - + -
105C LEU* 3.5 43.1 - - + -
108C GLN* 3.8 18.4 - - + -
109C ILE* 4.3 20.4 - - + -
187C ASP 2.9 13.0 + - - +
188C ILE* 3.5 15.5 - - + +
190C GLU* 1.4 75.7 - - - +
192C VAL* 1.3 60.1 + - + +
194C ARG* 3.5 2.8 + - - +
195C LEU* 3.0 51.7 + - + +
59D PHE* 4.2 17.3 - + - -
63D ILE* 4.9 6.3 - - + -
66D LEU* 6.4 0.4 - - + -
----------------------------------------------------------
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Residues in contact with VAL 192 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
188C ILE 3.1 16.4 + - - +
189C MET* 3.7 7.6 - - - +
191C PHE* 1.3 76.9 - - + +
193C LEU* 1.4 63.8 + - - +
195C LEU* 3.3 8.5 + - - +
196C VAL* 3.1 26.3 + - + +
63D ILE* 3.3 42.8 - - + -
80D LEU* 3.8 19.7 - - + -
83D PHE* 3.5 37.5 - - + -
84D THR* 4.8 4.9 - - + -
87D LEU* 5.4 3.4 - - + -
----------------------------------------------------------
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Residues in contact with LEU 193 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
189C MET* 2.9 26.1 + - + +
190C GLU* 3.4 11.7 - - + +
192C VAL* 1.4 76.3 - - - +
194C ARG* 1.4 59.7 + - - +
196C VAL* 3.6 1.5 - - - +
197C GLU* 3.0 30.9 + - - +
83D PHE* 3.7 33.2 - - + -
217D ARG* 3.5 35.2 - - + +
220D LEU* 4.6 3.6 - - + -
221D GLY* 3.4 30.7 - - - +
224D LEU* 3.6 25.1 - - + -
----------------------------------------------------------
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Residues in contact with ARG 194 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
104C THR* 3.3 38.7 - - + +
107C GLN* 5.2 7.7 + - - -
108C GLN* 4.1 9.0 - - - +
190C GLU* 3.0 34.4 + - + +
191C PHE 3.6 5.6 - - - +
193C LEU* 1.4 73.7 - - - +
195C LEU* 1.3 69.2 + - - +
197C GLU* 2.7 47.8 + - - +
198C ALA* 3.4 20.1 + - - +
217D ARG* 4.4 10.5 - - - +
225D HIS* 6.1 3.0 - - - -
----------------------------------------------------------
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Residues in contact with LEU 195 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
45C LEU* 6.1 0.2 - - + -
101C THR* 4.1 28.9 - - + +
104C THR* 4.7 6.1 - - + -
191C PHE* 3.0 38.6 + - + +
192C VAL* 3.3 10.1 + - - +
194C ARG* 1.3 77.6 - - - +
196C VAL* 1.3 65.8 + - + +
198C ALA* 3.3 12.4 + - - +
199C GLN* 3.4 10.4 + - - +
59D PHE* 3.8 20.6 - - + -
63D ILE* 3.4 33.4 - - + -
87D LEU* 5.2 12.1 - - + -
----------------------------------------------------------
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Residues in contact with VAL 196 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
192C VAL* 3.1 14.7 + - + +
193C LEU 3.6 9.6 - - - +
195C LEU* 1.3 70.7 - - - +
197C GLU* 1.3 57.6 + - - +
199C GLN* 3.6 10.4 - - + +
200C ALA* 2.9 30.5 + - - +
83D PHE* 3.7 38.1 - - + +
87D LEU* 4.1 29.8 - - + -
210D LEU* 5.2 0.9 - - - +
213D LEU* 3.7 29.6 - - + +
214D SER* 5.9 0.2 - - - -
217D ARG* 3.8 11.7 - - + -
----------------------------------------------------------
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Residues in contact with GLU 197 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
193C LEU 3.0 19.7 + - - +
194C ARG* 2.7 52.7 + - - +
196C VAL* 1.3 74.6 - - - +
198C ALA* 1.4 59.3 + - - +
200C ALA* 3.2 6.6 + - - +
201C THR* 2.8 35.2 + - - +
214D SER* 6.1 1.3 - - - +
217D ARG* 3.5 37.9 + - - +
----------------------------------------------------------
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Residues in contact with ALA 198 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
97C LEU* 3.9 23.0 - - + +
100C ALA* 4.6 18.8 - - + -
101C THR* 5.7 1.8 - - - +
194C ARG 3.4 8.4 + - - +
195C LEU* 3.3 9.9 + - - +
197C GLU* 1.4 77.8 + - - +
199C GLN* 1.4 56.4 + - - +
201C THR* 3.3 7.5 + - - +
202C HIS* 2.8 29.6 + - - +
----------------------------------------------------------
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Residues in contact with GLN 199 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
97C LEU* 4.3 9.0 - - + +
195C LEU 3.4 10.6 + - - +
196C VAL* 3.6 10.2 - - - +
197C GLU 3.3 0.2 - - - -
198C ALA* 1.4 73.8 - - - +
200C ALA* 1.4 65.8 - - - +
202C HIS* 3.2 6.0 + - - +
203C PHE* 2.9 46.5 + - + +
86D SER* 5.3 0.5 + - - -
87D LEU* 3.4 30.1 + - + +
90D LYS* 4.5 18.2 - - - +
210D LEU* 3.2 37.0 - - + +
213D LEU* 5.1 1.0 - - - +
----------------------------------------------------------
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Residues in contact with ALA 200 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
196C VAL 2.9 22.3 + - - +
197C GLU* 3.6 5.8 - - - +
199C GLN* 1.4 71.5 - - - +
201C THR* 1.3 62.9 + - - +
203C PHE* 4.2 1.1 - - - +
204C GLN* 3.2 28.2 + - - +
207D HIS* 5.4 0.9 + - - -
210D LEU* 3.6 33.1 - - + +
211D SER* 5.4 1.1 - - - -
213D LEU* 5.9 0.2 - - + -
214D SER* 3.8 24.0 - - - +
----------------------------------------------------------
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Residues in contact with THR 201 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
197C GLU* 2.8 20.2 + - - +
198C ALA* 3.7 9.6 - - - -
199C GLN 3.1 0.2 - - - -
200C ALA* 1.3 80.3 - - - +
202C HIS* 1.4 60.1 + - - +
204C GLN* 3.4 3.3 + - - +
205C GLN* 3.3 42.1 + - + +
----------------------------------------------------------
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Residues in contact with HIS 202 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
90C LYS* 3.5 31.1 - - + +
93C SER* 2.9 34.6 + - - +
94C HIS* 3.1 35.5 + + + -
97C LEU* 3.8 14.4 - - + -
198C ALA 2.8 20.0 + - - +
199C GLN* 3.5 4.7 - - - +
201C THR* 1.4 71.9 - - - +
203C PHE* 1.3 86.1 + + - +
204C GLN 3.3 0.3 + - - -
205C GLN* 3.6 2.6 + - - +
206C GLY* 3.5 14.0 + - - -
203D PHE* 4.1 19.6 - + - -
----------------------------------------------------------
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Residues in contact with PHE 203 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
94C HIS* 5.9 2.7 - + - -
199C GLN* 2.9 45.9 + - + +
200C ALA 4.5 1.6 - - - +
202C HIS* 1.3 93.7 - + - +
204C GLN* 1.3 58.3 + - - +
206C GLY* 3.4 2.3 + - - -
207C HIS* 2.9 30.1 + - - +
90D LYS* 5.1 8.7 - - + -
202D HIS* 3.9 35.9 - + - -
203D PHE* 3.6 31.2 - + + -
206D GLY* 3.8 22.0 - - - -
207D HIS* 4.5 13.8 - - - +
210D LEU* 3.8 21.8 - - + -
----------------------------------------------------------
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Residues in contact with GLN 204 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
200C ALA* 3.2 19.7 + - - +
201C THR* 4.0 4.0 - - - +
202C HIS 3.1 0.8 - - - -
203C PHE* 1.3 79.2 - - - +
205C GLN* 1.4 56.0 + - + +
207C HIS* 3.1 8.5 + - + +
208C GLU* 3.0 38.2 + - + +
207D HIS* 3.5 33.6 + - + +
211D SER* 5.0 3.5 + - - -
214D SER* 5.7 3.3 + - - -
----------------------------------------------------------
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Residues in contact with GLN 205 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
89C HIS* 5.1 21.1 + - + -
93C SER* 3.0 30.3 + - - +
96C GLU* 4.8 10.5 + - - +
201C THR* 3.3 33.7 + - + +
202C HIS 4.2 4.0 - - - +
203C PHE 3.5 0.2 - - - -
204C GLN* 1.4 72.0 - - - +
206C GLY* 1.3 60.2 + - - +
207C HIS 3.5 0.9 + - - -
208C GLU* 3.5 24.2 + - - +
209C GLU* 3.9 13.7 + - - +
----------------------------------------------------------
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Residues in contact with GLY 206 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
90C LYS* 4.2 29.1 + - - -
202C HIS 3.5 7.7 + - - -
203C PHE 3.4 6.7 + - - -
204C GLN 3.3 1.0 - - - -
205C GLN* 1.3 76.7 - - - +
207C HIS* 1.3 59.8 + - - +
209C GLU* 4.7 4.7 - - - +
210C LEU* 3.9 20.3 + - - +
203D PHE* 4.2 18.0 - - - -
----------------------------------------------------------
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Residues in contact with HIS 207 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
203C PHE 2.9 17.2 + - - +
204C GLN* 3.3 11.3 - - + +
206C GLY* 1.3 77.0 - - - +
208C GLU* 1.4 63.5 + - - +
209C GLU 3.6 0.9 - - - -
210C LEU* 3.1 33.8 + - + +
211C SER 4.7 0.9 + - - -
203D PHE* 3.9 3.4 - - - +
204D GLN* 3.9 33.6 + - - +
207D HIS* 3.3 45.0 + + + -
----------------------------------------------------------
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Residues in contact with GLU 208 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
89C HIS* 6.0 1.7 - - - -
204C GLN* 3.0 22.2 + - + +
205C GLN* 3.7 14.0 - - - +
206C GLY 3.4 0.2 - - - -
207C HIS* 1.4 80.8 - - - +
209C GLU* 1.4 57.3 + - - +
210C LEU 3.7 0.2 + - - -
211C SER* 4.2 9.2 + - - -
----------------------------------------------------------
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Residues in contact with GLU 209 (chain C).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
86C SER* 2.7 30.0 + - - +
89C HIS* 2.8 34.9 + - + +
90C LYS* 4.8 7.7 + - - +
205C GLN 3.9 10.3 + - - +
206C GLY* 5.0 3.5 - - - +
207C HIS 3.6 0.2 - - - -
208C GLU* 1.4 75.2 - - + +
210C LEU* 1.4 63.8 + - - +
211C SER* 3.2 4.0 - - - -
212C ARG* 2.7 67.8 + - + +
213C LEU* 3.2 11.2 + - + +
----------------------------------------------------------
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A short description of the
analytical approach
The contact analysis used in this page
is based upon the approach
developed in:
Sobolev V., Wade R.C., Vriend G.
and Edelman M. PROTEINS (1996)
25, 120-129.
Contact legitimacy depends on the hydrophobic-hydrophilic
properties of the contacting atoms. In order to
define it, for each inter-atomic contact,
eight atom classes have been introduced:
I Hydrophilic - N and O that can donate and accept hydrogen bonds
(e.g., oxygen of hydroxyl group of Ser. or Thr)
II Acceptor - N or O that can only accept a hydrogen bond
III Donor - N that can only donate a hydrogen bond
IV Hydrophobic - Cl, Br, I and all C atoms that are not in
aromatic rings and do not have a covalent bond to
a N or O atom
V Aromatic - C in aromatic rings irrespective of any other
bonds formed by the atom
VI Neutral - C atoms that have a covalent bond to at least one
atom of class I or two or more atoms from class II
or III; atoms; S, F, P, and metal atoms in all cases
VII Neutral-donor - C atoms that have a covalent bond with only one
atom of class III
VIII Neutral-acceptor - C atoms that have a covalent bond with only
one atom of class II
For each pair of contacts the state of legitimacy
is shown below:
Legend:
+, legitimate
-, illegitimate
------------------------------------------------------------
Atomic class I II III IV V VI VII VIII
------------------------------------------------------------
I (Hydrophilic) + + + - + + + +
II (Acceptor) + - + - + + + -
III (Donor) + + - - + + - +
IV (Hydrophobic) - - - + + + + +
V (Aromatic) + + + + + + + +
VI (Neutral) + + + + + + + +
VII (Neutral-donor) + + - + + + - +
VIII (Neutral-acceptor) + - + + + + + -
------------------------------------------------------------
Warning!
Atom classes for heterogroups are automatically
assigned based on the atomic coordinates. However, in
three cases (see below) the automatic assignment
is currently ambiguous. In these
cases, the user is advised to manually analyse
the full list of contacts using
LPC software.
1. Carbon atoms belonging to a 4-, 5- or 6-member ring are
considered "aromatic" (Class V) if the ring is approximately
planar, and "hydrophobic" (Class IV) or "neutral" (Classes
VI, VII, VIII) if the ring is non-planar.
2. The oxygen atom of a carbonyl or hydroxy group is considered
"hydroxy" (Class I) if the CO bond is longer than 1.29 Å, and
"carbonyl" (Class II) if shorter.
3. All nitrogen atoms are considered "hydrophilic" (Class I).
Please E-mail any
questions and/or suggestions concerning this page to
Vladimir.Sobolev@weizmann.ac.il