Contacts of the helix formed by residues 47 - 135 (chain F) in PDB entry 4LL7
Residue contacts within the protein are
derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332). A
short description of the analytical approach
is given at the end of the page.
Note:
Non-standard 3 letter residue
codes indicate a heterogroup. To identify
and analyse, use LPC software
Legend:
Dist - nearest distance (Å) between atoms of two residues
Surf - contact surface area (Å2) between two residues
HB - hydrophilic-hydrophilic contact (hydrogen bond)
Arom - aromatic-aromatic contact
Phob - hydrophobic-hydrophobic contact
DC - hydrophobic-hydrophilic contact (destabilizing contact)
+/- - indicates presence/absence of a specific contacts
* - indicates residues forming contacts by their side chain
(including CA atoms)
Residues in contact with GLU 47 (chain F).
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
46F ILE* 1.3 80.1 - - - +
48F SER* 1.3 70.8 + - - +
50F HIS* 3.2 13.3 + - - +
51F ASP* 2.9 28.1 + - - +
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Residues in contact with SER 48 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
46F ILE* 3.3 2.5 - - - +
47F GLU* 1.3 88.3 - - - +
49F LEU* 1.3 57.9 + - - +
51F ASP* 3.2 10.9 + - - +
52F GLN* 2.9 30.9 + - - +
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Residues in contact with LEU 49 (chain F).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
46F ILE* 3.1 28.0 + - + +
48F SER* 1.3 80.8 - - - +
50F HIS* 1.3 58.8 + - + +
52F GLN* 3.2 8.2 + - + +
53F ILE* 2.9 33.4 + - + +
50G HIS* 3.4 57.9 - - + +
53G ILE* 3.1 42.0 - - + -
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Residues in contact with HIS 50 (chain F).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
46F ILE* 3.0 45.6 + - + +
47F GLU* 3.2 11.6 + - - +
49F LEU* 1.3 75.8 - - + +
51F ASP* 1.3 60.4 + - - +
53F ILE* 3.2 19.7 + - + +
54F ASP* 2.9 37.6 + - - +
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Residues in contact with ASP 51 (chain F).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
47F GLU* 2.9 14.3 + - - +
48F SER* 3.3 12.7 - - - +
50F HIS* 1.3 77.4 - - - +
52F GLN* 1.3 60.9 + - - +
54F ASP* 3.2 11.8 + - - +
55F MET* 2.8 30.2 + - - +
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Residues in contact with GLN 52 (chain F).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
48F SER 2.9 14.7 + - - +
49F LEU* 3.4 14.1 - - + +
51F ASP* 1.3 80.0 - - - +
53F ILE* 1.3 57.1 + - - +
55F MET* 3.3 40.6 + - - +
56F LEU* 2.9 30.4 + - - +
53G ILE* 3.5 26.6 - - + +
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Residues in contact with ILE 53 (chain F).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
49F LEU* 2.9 20.0 + - + +
50F HIS* 3.2 23.8 + - + +
52F GLN* 1.3 77.8 - - - +
54F ASP* 1.3 66.7 + - - +
56F LEU* 3.4 0.6 + - - -
57F THR* 3.0 25.3 + - - +
52G GLN* 3.8 24.2 - - + +
53G ILE* 3.2 35.7 - - + +
56G LEU* 3.1 31.4 - - + +
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Residues in contact with ASP 54 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
50F HIS* 2.9 23.2 + - - +
51F ASP* 3.5 11.9 - - - +
53F ILE* 1.3 78.5 - - - +
55F MET* 1.3 67.0 + - - +
57F THR* 3.2 9.7 + - - -
58F LYS* 2.9 23.8 + - - +
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Residues in contact with MET 55 (chain F).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
51F ASP* 2.8 17.7 + - - +
52F GLN* 3.4 38.8 - - - +
54F ASP* 1.3 75.0 - - - +
56F LEU* 1.3 91.6 + - + +
58F LYS* 3.1 6.2 + - - +
59F THR* 2.8 42.9 + - - +
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Residues in contact with LEU 56 (chain F).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
52F GLN* 2.9 8.9 + - - +
53F ILE 3.5 8.7 - - - +
54F ASP 3.2 0.2 - - - -
55F MET* 1.3 96.2 - - + +
57F THR* 1.3 55.2 + - - +
59F THR* 3.8 4.2 - - + -
60F ASN* 2.7 40.8 + - - +
53G ILE* 2.7 50.0 - - + +
56G LEU* 3.1 25.8 - - + +
57G THR* 3.1 25.1 - - + +
60G ASN* 5.3 9.9 - - + +
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Residues in contact with THR 57 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
53F ILE* 3.0 15.4 + - - +
54F ASP* 3.4 11.5 + - - -
56F LEU* 1.3 77.1 - - - +
58F LYS* 1.3 53.0 + - - +
60F ASN* 3.5 5.6 - - - +
61F LEU* 2.6 58.9 + - + +
56G LEU* 3.9 20.4 - - + +
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Residues in contact with LYS 58 (chain F).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
54F ASP 2.9 14.0 + - - +
55F MET* 3.7 7.6 - - - +
57F THR* 1.3 72.8 - - - +
59F THR* 1.3 71.1 + - - +
60F ASN 2.9 2.0 + - - -
61F LEU* 3.0 17.8 + - + +
62F GLN* 3.0 37.0 + - - +
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Residues in contact with THR 59 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
55F MET* 2.8 37.2 + - + +
56F LEU* 3.8 6.7 - - + -
58F LYS* 1.3 76.2 - - - +
60F ASN* 1.3 57.5 + - - +
62F GLN* 3.0 30.2 - - - +
63F LEU* 3.7 11.0 + - + +
60G ASN* 4.3 16.8 - - - +
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Residues in contact with ASN 60 (chain F).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
56F LEU 2.7 21.5 + - - +
57F THR* 3.6 6.5 + - - +
58F LYS 2.9 0.2 - - - -
59F THR* 1.3 75.3 - - - +
61F LEU* 1.3 65.5 + - - +
62F GLN 2.9 1.6 - - - -
63F LEU 2.9 11.6 + - - -
56G LEU* 3.6 11.1 + - - +
59G THR* 3.4 28.7 - - - +
60G ASN* 2.5 51.8 - - + +
63G LEU* 3.0 23.2 - - - +
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Residues in contact with LEU 61 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
57F THR* 2.6 44.8 + - + +
58F LYS* 3.0 9.4 + - + +
60F ASN* 1.3 73.5 - - + +
62F GLN* 1.3 64.2 + - - +
64F THR* 3.1 22.2 + - - +
65F THR* 3.1 15.8 + - - -
63G LEU* 5.1 0.2 - - - -
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Residues in contact with GLN 62 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
58F LYS* 3.0 40.7 - - - +
59F THR* 3.0 19.1 - - - +
61F LEU* 1.3 78.9 - - - +
63F LEU* 1.3 63.3 + - + +
65F THR* 3.0 14.0 + - - +
66F GLN* 2.9 30.4 + - + +
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Residues in contact with LEU 63 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
59F THR* 3.8 12.8 - - + +
60F ASN 2.9 7.6 + - - +
62F GLN* 1.3 80.7 - - + +
64F THR* 1.3 60.2 + - - +
66F GLN* 3.1 12.5 + - + +
67F SER* 3.0 21.1 + - - -
60G ASN* 2.7 56.1 - - - +
63G LEU* 3.1 18.5 - - + +
64G THR* 2.8 33.7 - - + +
67G SER* 3.8 6.9 + - - +
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Residues in contact with THR 64 (chain F).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
60F ASN 4.1 0.7 + - - -
61F LEU* 3.1 16.7 + - - +
63F LEU* 1.3 77.1 - - - +
65F THR* 1.3 63.7 + - - +
67F SER* 2.5 24.1 + - - +
68F GLN* 3.0 21.4 + - + +
63G LEU* 2.9 29.6 - - - +
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Residues in contact with THR 65 (chain F).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
61F LEU 3.1 11.4 + - - -
62F GLN* 3.0 18.1 + - - +
64F THR* 1.3 78.6 - - - +
66F GLN* 1.3 73.1 + - - +
68F GLN* 3.3 9.4 + - + +
69F ASN* 3.1 25.3 + - + +
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Residues in contact with GLN 66 (chain F).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
62F GLN* 2.9 24.3 + - + +
63F LEU* 3.1 12.5 + - + +
65F THR* 1.3 88.1 - - - +
67F SER* 1.3 60.1 + - - +
69F ASN* 2.7 45.0 + - - +
70F LEU* 3.2 11.9 - - + +
67G SER* 3.5 17.0 - - - +
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Residues in contact with SER 67 (chain F).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
63F LEU 3.0 8.2 + - - -
64F THR* 2.5 32.7 + - - +
66F GLN* 1.3 76.0 - - - +
68F GLN* 1.3 60.4 + - - +
71F LEU* 3.2 14.6 + - - +
63G LEU* 5.1 3.0 - - - +
66G GLN* 4.4 22.2 - - - -
67G SER* 4.0 4.4 + - - -
70G LEU* 3.0 35.0 - - - +
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Residues in contact with GLN 68 (chain F).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
64F THR* 3.0 23.6 + - + +
65F THR* 3.6 12.4 - - - +
66F GLN 3.2 0.2 - - - -
67F SER* 1.3 76.9 + - - +
69F ASN* 1.3 60.0 + - - +
71F LEU* 3.4 12.1 + - + +
72F SER* 3.0 26.0 + - - -
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Residues in contact with ASN 69 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
65F THR* 3.1 12.4 + - + +
66F GLN* 2.7 52.0 + - - +
68F GLN* 1.3 73.7 - - - +
70F LEU* 1.3 96.4 + - - +
72F SER* 3.0 9.1 + - - -
73F LYS* 2.9 27.4 + - - +
----------------------------------------------------------
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Residues in contact with LEU 70 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
66F GLN* 3.2 10.9 + - + +
69F ASN* 1.3 104.8 + - - +
71F LEU* 1.3 57.2 + - - +
73F LYS* 3.4 11.6 + - + +
74F LEU* 3.0 27.2 + - - +
67G SER* 3.6 20.2 - - - +
70G LEU* 3.0 52.1 - - + +
71G LEU* 4.0 13.7 - - + +
74G LEU* 3.3 30.8 - - + +
----------------------------------------------------------
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Residues in contact with LEU 71 (chain F).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
67F SER 3.2 17.9 + - - +
68F GLN* 3.5 12.8 - - + +
69F ASN 3.1 0.4 - - - -
70F LEU* 1.3 75.5 - - - +
72F SER* 1.3 60.4 + - - +
73F LYS 3.2 0.4 - - - -
74F LEU* 3.3 15.1 + - + +
75F GLU* 3.0 26.3 + - - +
70G LEU* 4.2 16.8 - - + +
----------------------------------------------------------
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Residues in contact with SER 72 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
68F GLN 3.0 13.1 + - - -
69F ASN* 3.3 12.3 - - - -
71F LEU* 1.3 75.9 - - - +
73F LYS* 1.3 59.9 + - - +
75F GLU* 3.4 8.3 + - - +
76F LEU* 3.1 38.0 + - - +
----------------------------------------------------------
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Residues in contact with LYS 73 (chain F).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
69F ASN 2.9 12.0 + - - +
70F LEU* 3.4 14.8 - - + +
71F LEU 3.2 0.2 - - - -
72F SER* 1.3 77.0 - - - +
74F LEU* 1.3 58.6 + - - +
76F LEU* 3.2 13.3 + - + +
77F ALA* 2.8 30.2 + - - +
74G LEU* 3.6 39.7 - - + +
----------------------------------------------------------
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Residues in contact with LEU 74 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
70F LEU 3.0 14.1 + - - +
71F LEU* 3.6 16.4 - - + +
72F SER 3.3 0.2 - - - -
73F LYS* 1.3 73.6 - - - +
75F GLU* 1.3 60.7 + - - +
77F ALA* 3.7 7.6 - - + +
78F GLN* 2.8 40.1 + - + +
70G LEU* 4.6 15.5 - - + +
73G LYS* 4.2 30.3 - - + -
74G LEU* 4.9 7.8 - - + +
----------------------------------------------------------
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Residues in contact with GLU 75 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
71F LEU 3.0 13.7 + - - +
72F SER* 3.5 12.6 - - - +
73F LYS 3.2 0.2 - - - -
74F LEU* 1.3 78.2 - - - +
76F LEU* 1.3 61.1 + - + +
78F GLN* 3.9 9.3 - - - +
79F SER* 3.0 29.3 + - - -
----------------------------------------------------------
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Residues in contact with LEU 76 (chain F).
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----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
72F SER* 3.1 23.3 + - - +
73F LYS* 3.6 14.4 - - + +
75F GLU* 1.3 80.2 - - + +
77F ALA* 1.3 60.5 + - - +
79F SER* 3.2 9.0 + - - -
80F LYS* 2.9 44.7 + - - +
----------------------------------------------------------
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Residues in contact with ALA 77 (chain F).
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
73F LYS 2.8 17.5 + - - +
74F LEU* 3.7 9.4 - - + +
76F LEU* 1.3 74.7 - - - +
78F GLN* 1.3 65.5 + - - +
80F LYS* 3.1 12.3 + - - +
81F GLU* 2.9 29.0 + - + +
74G LEU* 6.4 2.0 - - + -
77G ALA* 5.1 15.7 - - + -
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Residues in contact with GLN 78 (chain F).
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----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
74F LEU* 2.8 29.5 + - + +
75F GLU* 3.9 11.4 - - - +
77F ALA* 1.3 73.0 - - - +
79F SER* 1.3 64.0 + - - +
81F GLU* 3.2 11.4 + - - +
82F SER* 3.0 31.3 + - - +
----------------------------------------------------------
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Residues in contact with SER 79 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
75F GLU* 3.0 21.2 + - - -
76F LEU* 3.4 10.3 - - - -
78F GLN* 1.3 80.2 - - - +
80F LYS* 1.3 56.2 + - - +
82F SER* 3.3 7.9 + - - -
83F LYS* 3.0 28.5 + - - +
----------------------------------------------------------
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Residues in contact with LYS 80 (chain F).
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----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
76F LEU* 2.9 28.6 + - - +
77F ALA* 3.1 12.1 + - - +
79F SER* 1.3 75.2 - - - +
81F GLU* 1.3 59.3 + - + +
83F LYS* 3.1 7.4 + - - +
84F LEU* 2.8 32.3 + - - +
81G GLU* 6.1 0.9 - - - +
----------------------------------------------------------
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Residues in contact with GLU 81 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
77F ALA* 2.9 17.0 + - + +
78F GLN* 3.5 18.8 - - - +
80F LYS* 1.3 76.7 - - + +
82F SER* 1.3 62.6 + - - +
84F LEU* 4.0 5.8 - - - +
85F LEU* 3.0 45.7 + - + +
80G LYS* 2.8 43.4 + - - +
81G GLU* 5.9 2.1 - - - -
84G LEU* 4.2 19.4 - - - +
----------------------------------------------------------
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Residues in contact with SER 82 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
78F GLN* 3.0 25.9 + - - +
79F SER* 3.6 10.8 - - - -
80F LYS 3.2 0.2 - - - -
81F GLU* 1.3 76.7 - - - +
83F LYS* 1.3 62.8 + - - +
85F LEU* 4.3 5.1 - - - +
86F GLU* 3.1 28.1 + - - +
----------------------------------------------------------
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Residues in contact with LYS 83 (chain F).
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----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
79F SER* 3.0 18.3 + - - +
80F LYS* 3.5 8.5 - - - +
82F SER* 1.3 79.1 + - - +
84F LEU* 1.3 60.4 + - - +
86F GLU* 3.2 32.8 + - - +
87F ASN* 2.9 49.0 + - - +
----------------------------------------------------------
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Residues in contact with LEU 84 (chain F).
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----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
133C LEU* 4.1 36.3 - - + +
80F LYS 2.8 19.7 + - - +
81F GLU* 4.0 7.0 - - - +
83F LYS* 1.3 72.2 - - - +
85F LEU* 1.3 62.3 + - + +
87F ASN* 3.1 7.9 + - - +
88F LEU* 2.9 45.7 + - + +
84G LEU* 3.2 36.3 - - + -
88G LEU* 4.4 10.5 - - + -
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Residues in contact with LEU 85 (chain F).
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----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
133A LEU 5.3 2.2 - - - +
134A SER* 4.3 26.5 - - - +
81F GLU* 3.0 36.7 + - + +
82F SER* 4.3 4.0 - - - +
84F LEU* 1.3 76.3 - - + +
86F GLU* 1.3 58.2 + - - +
88F LEU* 3.9 22.2 - - + +
89F ASN* 2.8 48.8 + - - +
80G LYS* 6.3 0.2 - - - +
84G LEU* 5.3 6.1 - - + -
----------------------------------------------------------
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Residues in contact with GLU 86 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
82F SER* 3.1 23.3 + - - +
83F LYS* 3.2 35.2 + - - +
84F LEU 3.3 0.2 - - - -
85F LEU* 1.3 77.3 - - - +
87F ASN* 1.3 60.1 + - - +
89F ASN* 4.0 6.8 - - - +
90F LEU* 2.7 49.4 + - + +
----------------------------------------------------------
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Residues in contact with ASN 87 (chain F).
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----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
133C LEU* 3.9 31.6 - - + +
83F LYS* 2.9 45.9 + - - +
84F LEU* 3.1 10.3 + - - +
85F LEU 3.0 0.6 - - - -
86F GLU* 1.3 83.5 - - - +
88F LEU* 1.3 64.7 + - - +
90F LEU* 3.1 22.0 + - - +
91F LEU* 3.1 19.0 + - + +
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Residues in contact with LEU 88 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
130A MET* 4.0 26.3 - - + +
133A LEU* 5.5 1.1 - - + -
134A SER* 4.8 18.2 - - - +
130C MET* 3.1 36.1 - - + -
133C LEU* 3.6 8.5 - - + -
84F LEU* 2.9 37.8 + - + +
85F LEU* 3.0 25.8 + - + +
87F ASN* 1.3 75.5 - - - +
89F ASN* 1.3 58.0 + - - +
91F LEU* 3.5 6.4 + - - +
92F LYS* 2.9 29.7 + - - +
84G LEU* 5.0 12.1 - - + -
88G LEU* 5.0 5.4 - - + -
----------------------------------------------------------
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Residues in contact with ASN 89 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
134A SER* 2.8 29.0 + - - -
85F LEU* 2.8 34.6 + - - +
86F GLU* 4.0 7.8 - - - +
88F LEU* 1.3 73.2 - - - +
90F LEU* 1.3 65.2 + - + +
92F LYS* 3.4 18.0 + - + +
93F ASN* 3.1 22.9 + - - +
----------------------------------------------------------
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Residues in contact with LEU 90 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
86F GLU* 2.7 36.3 - - + +
87F ASN* 3.1 19.4 + - - +
89F ASN* 1.3 84.3 - - + +
91F LEU* 1.3 65.9 + - + +
93F ASN* 3.3 8.4 + - - +
94F GLU* 3.1 19.7 + - - +
----------------------------------------------------------
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Residues in contact with LEU 91 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
130A MET* 6.2 2.2 - - - -
126C GLN* 3.6 22.3 - - - +
129C LYS* 3.7 38.1 - - + +
130C MET* 3.9 20.6 - - + +
133C LEU* 3.5 33.7 - - + -
87F ASN* 3.1 12.0 + - + +
88F LEU* 3.9 4.0 - - - +
90F LEU* 1.3 76.5 - - + +
92F LYS* 1.3 56.4 + - - +
94F GLU* 2.7 7.3 + - + +
95F ASN* 2.5 39.3 + - + +
----------------------------------------------------------
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Residues in contact with LYS 92 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
127A LYS* 3.5 22.3 - - + +
130A MET* 5.3 5.1 - - + +
131A ASP* 3.1 48.9 + - - +
134A SER* 5.5 4.7 - - - -
135A LYS* 6.0 1.0 - - - +
208A SO4 4.7 9.3 + - - -
211A PT 4.4 6.1 - - - -
88F LEU 2.9 19.3 + - - +
89F ASN* 3.4 20.9 + - - +
91F LEU* 1.3 75.9 - - - +
93F ASN* 1.3 61.4 + - - +
95F ASN* 3.2 7.9 + - - +
96F GLU* 2.9 28.6 + - - +
----------------------------------------------------------
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Residues in contact with ASN 93 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
89F ASN 3.1 9.8 + - - +
90F LEU* 3.5 10.0 + - - +
91F LEU 3.1 0.4 - - - -
92F LYS* 1.3 83.7 - - - +
94F GLU* 1.3 62.1 + - - +
96F GLU* 3.4 6.7 + - - +
97F ASN* 3.1 20.3 + - - +
206F IPA 3.2 19.0 + - - -
207F IPA 3.7 26.3 - - - +
----------------------------------------------------------
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Residues in contact with GLU 94 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
122C ARG* 3.3 14.3 + - - -
126C GLN* 3.1 39.0 - - + +
129C LYS* 5.4 1.6 - - - +
90F LEU 3.1 12.6 + - - +
91F LEU* 2.7 9.5 + - + +
93F ASN* 1.3 73.6 + - - +
95F ASN* 1.3 61.0 + - - +
97F ASN* 2.9 35.4 + - - +
98F LEU* 3.0 33.2 + - + +
207F IPA 5.8 3.8 - - - +
----------------------------------------------------------
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Residues in contact with ASN 95 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
123A TYR* 4.6 5.3 + - - +
126A GLN* 4.8 1.4 - - - +
127A LYS* 2.9 39.1 - - + +
211A PT 3.2 21.2 - - - -
123C TYR* 3.9 13.2 - - - -
126C GLN* 4.4 6.6 + - + +
91F LEU* 2.5 19.7 + - + +
92F LYS 3.5 4.3 - - - +
94F GLU* 1.3 71.0 - - - +
96F GLU* 1.3 61.7 + - - +
98F LEU* 3.5 7.9 + - - +
99F ASN* 3.0 37.3 + - - +
----------------------------------------------------------
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Residues in contact with GLU 96 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
127A LYS* 2.8 41.1 + - - +
92F LYS 2.9 15.9 + - - +
93F ASN* 3.6 9.2 - - - +
94F GLU 3.2 0.2 - - - -
95F ASN* 1.3 75.1 - - - +
97F ASN* 1.3 65.6 + - - +
99F ASN* 3.4 7.6 + - - +
100F SER* 3.1 28.9 + - - -
103F GLU* 5.3 2.9 - - - +
206F IPA 3.4 25.9 - - + +
----------------------------------------------------------
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Residues in contact with ASN 97 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
122C ARG* 3.2 13.5 - - - +
205C SO4 2.8 29.2 + - - -
93F ASN* 3.1 10.3 + - - +
94F GLU* 2.9 35.5 + - - +
96F GLU* 1.3 78.0 - - - +
98F LEU* 1.3 61.5 + - - +
100F SER 3.4 1.2 + - - -
101F ILE* 3.1 28.9 + - - +
205F EDO 3.0 24.7 + - - -
206F IPA 3.2 24.3 - - + +
207F IPA 4.1 10.8 - - - +
----------------------------------------------------------
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Residues in contact with LEU 98 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
119C LEU* 3.8 10.9 - - + +
122C ARG* 3.5 53.2 - - + +
123C TYR* 3.2 40.8 + - + +
126C GLN* 3.5 31.4 - - + -
94F GLU* 3.0 26.6 + - - +
95F ASN* 3.8 5.2 - - - +
96F GLU 3.3 0.2 - - - -
97F ASN* 1.3 75.5 - - - +
99F ASN* 1.3 65.7 + - - +
101F ILE* 3.0 7.0 + - + +
102F PHE* 3.0 19.8 + - - +
----------------------------------------------------------
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Residues in contact with ASN 99 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
120A SER* 4.5 1.4 + - - -
123A TYR* 3.3 33.0 + - - +
124A ASN* 2.8 32.2 + - - +
127A LYS* 3.7 17.2 - - - +
123C TYR* 2.8 19.1 + - - -
95F ASN* 3.0 28.0 + - - +
96F GLU* 3.8 10.5 + - - +
97F ASN 3.4 0.4 - - - -
98F LEU* 1.3 74.2 - - - +
100F SER* 1.3 64.2 + - - +
102F PHE* 3.3 5.4 + - - +
103F GLU* 3.1 29.3 + - - +
----------------------------------------------------------
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Residues in contact with SER 100 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
96F GLU* 3.1 21.4 + - - -
97F ASN 3.6 0.4 - - - -
99F ASN* 1.3 77.6 - - - +
101F ILE* 1.3 60.5 + - - +
103F GLU* 3.5 14.5 + - - +
104F ARG* 3.2 24.6 + - - +
205F EDO 3.1 33.1 + - - -
206F IPA 4.4 9.9 - - - +
----------------------------------------------------------
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Residues in contact with ILE 101 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
115C ASP 5.8 0.2 - - - +
119C LEU* 4.0 18.6 - - + -
122C ARG* 3.7 28.7 - - - +
205C SO4 3.8 12.8 - - - +
97F ASN* 3.1 24.4 + - - +
98F LEU* 3.0 13.1 + - + +
100F SER* 1.3 74.5 - - - +
102F PHE* 1.3 66.5 + - - +
104F ARG* 3.0 18.4 + - - +
105F LYS* 3.0 50.1 + - - +
205F EDO 3.4 14.4 - - - -
----------------------------------------------------------
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Residues in contact with PHE 102 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
116A TYR* 3.5 28.7 - + - -
119A LEU* 3.9 18.8 - - + -
120A SER* 3.6 32.1 - - - +
123A TYR* 4.0 9.2 - + + -
116C TYR* 3.5 19.5 - + - -
119C LEU* 3.4 19.2 - - + +
123C TYR* 4.1 18.4 - + - +
98F LEU 3.0 10.6 + - - +
99F ASN* 3.3 8.9 + - - +
101F ILE* 1.3 75.6 - - - +
103F GLU* 1.3 56.8 + - - +
105F LYS* 3.2 2.2 + - - +
106F ASN* 2.9 52.6 + - - -
102G PHE* 4.0 12.1 - + - -
----------------------------------------------------------
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Residues in contact with GLU 103 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
120A SER* 3.8 14.4 - - - +
124A ASN* 3.8 18.1 + - - +
212A DTT 5.5 2.4 - - - -
96F GLU* 5.3 0.3 - - - +
99F ASN* 3.1 21.8 + - - +
100F SER* 3.8 13.6 + - - +
101F ILE 3.2 0.4 - - - -
102F PHE* 1.3 77.2 - - - +
104F ARG* 1.3 61.8 + - - +
106F ASN* 3.7 7.6 + - - +
107F LYS* 3.3 30.9 + - - +
203F DY 2.4 30.7 - - - -
----------------------------------------------------------
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Residues in contact with ARG 104 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
100F SER 3.2 7.5 + - - +
101F ILE* 3.0 23.4 + - - +
103F GLU* 1.3 78.3 - - - +
105F LYS* 1.3 91.0 + - + +
107F LYS* 3.2 19.2 + - + +
108F LYS* 3.3 24.5 + - - +
205F EDO 3.4 40.2 + - - -
----------------------------------------------------------
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Residues in contact with LYS 105 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
112C LEU* 4.1 8.9 - - + +
115C ASP* 2.8 49.6 + - + +
116C TYR* 3.4 27.4 + - + +
119C LEU* 4.5 9.4 - - + -
101F ILE* 3.0 40.1 + - + +
102F PHE* 3.7 5.6 - - - +
104F ARG* 1.3 95.8 - - + +
106F ASN* 1.3 66.9 + - - +
108F LYS* 3.1 12.0 + - + +
109F LEU* 2.9 20.4 + - - +
----------------------------------------------------------
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Residues in contact with ASN 106 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
113A GLU 5.8 0.2 - - - -
116A TYR* 3.2 36.4 + - - +
117A SER* 3.6 13.7 - - - +
120A SER* 3.5 18.6 + - - -
116C TYR* 2.9 19.3 + - - -
102F PHE* 2.9 31.8 + - - +
103F GLU* 3.9 8.1 - - - +
105F LYS* 1.3 75.3 - - - +
107F LYS* 1.3 57.5 + - + +
109F LEU* 3.2 4.1 + - - +
110F LYS* 2.8 40.8 + - + +
----------------------------------------------------------
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Residues in contact with LYS 107 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
103F GLU* 3.3 18.2 + - - +
104F ARG* 3.2 15.0 + - + +
105F LYS 3.1 0.6 - - - -
106F ASN* 1.3 79.6 - - + +
108F LYS* 1.3 61.0 + - + +
110F LYS* 3.5 8.8 + - + +
111F GLU* 2.9 33.0 + - - +
----------------------------------------------------------
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Residues in contact with LYS 108 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
112C LEU* 4.5 16.8 - - + +
104F ARG* 3.3 20.8 + - + +
105F LYS* 3.1 12.0 + - + +
107F LYS* 1.3 76.5 - - + +
109F LEU* 1.3 61.3 + - - +
111F GLU* 3.2 24.3 + - - +
112F LEU* 2.9 28.2 + - - +
----------------------------------------------------------
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Residues in contact with LEU 109 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
109A LEU* 3.7 31.9 - - + -
112A LEU* 4.8 0.4 - - + -
113A GLU* 4.4 21.8 - - + +
116A TYR* 3.8 26.7 - - + -
109C LEU* 5.4 2.0 - - + -
112C LEU* 3.9 21.7 - - + +
116C TYR* 3.6 23.1 - - + +
105F LYS 2.9 12.8 + - - +
106F ASN* 3.5 8.7 - - - +
108F LYS* 1.3 76.7 - - - +
110F LYS* 1.3 58.1 + - + +
112F LEU* 3.1 6.9 + - + +
113F GLU* 2.9 27.5 + - - +
109G LEU* 5.1 8.1 - - + -
----------------------------------------------------------
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Residues in contact with LYS 110 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
113A GLU* 3.0 38.8 - - + +
117A SER* 3.2 29.0 + - - -
205A SO4 4.3 4.8 + - - -
121E ASN* 3.3 28.7 + - - +
124E ASN* 6.0 0.8 - - - +
128E GLU* 5.0 4.1 - - - +
106F ASN* 2.8 27.4 + - + +
107F LYS* 3.9 8.5 - - + +
109F LEU* 1.3 75.3 - - + +
111F GLU* 1.3 63.9 + - + +
114F LYS* 3.2 21.1 + - - +
----------------------------------------------------------
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Residues in contact with GLU 111 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
108C LYS* 5.9 0.5 + - - -
107F LYS* 2.9 21.5 + - - +
108F LYS* 3.6 25.1 + - - +
109F LEU 3.2 0.8 - - - -
110F LYS* 1.3 76.7 - - + +
112F LEU* 1.3 59.4 + - - +
114F LYS* 3.0 12.4 + - - +
115F ASP* 2.9 35.3 + - - +
----------------------------------------------------------
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Residues in contact with LEU 112 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
109A LEU* 4.8 0.4 - - + -
105C LYS* 3.7 28.3 - - + +
108C LYS* 3.8 32.5 - - + +
109C LEU* 3.5 47.6 - - + +
112C LEU* 4.1 11.7 - - + -
108F LYS 2.9 16.1 + - - +
109F LEU* 3.1 10.5 + - + +
111F GLU* 1.3 78.4 - - - +
113F GLU* 1.3 61.5 + - - +
115F ASP* 3.2 8.3 + - - +
116F TYR* 3.0 37.9 + - + -
----------------------------------------------------------
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Residues in contact with GLU 113 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
106A ASN* 4.5 4.1 - - - +
109A LEU* 3.6 38.5 - - + +
110A LYS* 2.8 32.3 + - + +
113A GLU* 3.2 23.3 - - + +
128E GLU* 3.2 9.4 - - - +
201E DY 2.6 26.5 - - - -
109F LEU 2.9 10.8 + - - +
112F LEU* 1.3 76.8 - - - +
114F LYS* 1.3 56.7 + - - +
116F TYR* 3.3 2.9 + - + +
117F SER* 2.4 49.0 + - - -
----------------------------------------------------------
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Residues in contact with LYS 114 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
128E GLU* 4.2 34.9 + - + +
131E ASP* 3.1 31.7 + - - -
132E GLN* 3.5 16.2 + - - +
135E LYS* 5.2 0.6 - - - +
110F LYS 3.2 11.4 + - - +
111F GLU* 3.0 15.9 + - - +
113F GLU* 1.3 86.6 + - - +
115F ASP* 1.3 62.9 + - - +
117F SER* 3.6 5.8 + - - -
118F GLU* 3.2 41.4 + - - +
----------------------------------------------------------
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Residues in contact with ASP 115 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
105C LYS* 3.2 34.0 + - + +
108C LYS* 4.9 3.6 + - - -
207C SO4 3.4 1.9 + - - -
111F GLU* 2.9 27.3 + - - +
112F LEU* 3.4 12.0 - - - +
114F LYS* 1.3 76.3 - - - +
116F TYR* 1.3 55.0 + - - +
118F GLU* 3.4 2.8 + - - +
119F LEU* 2.7 36.0 + - - +
201F DY 2.5 27.9 - - - -
208F IPA 3.1 26.8 + - - +
----------------------------------------------------------
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Residues in contact with TYR 116 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
102A PHE* 3.7 21.3 - + - -
106A ASN* 3.2 26.7 + - - +
109A LEU* 3.7 18.2 - - + -
102C PHE* 3.4 25.4 - + - -
105C LYS* 3.3 22.3 + - + -
106C ASN* 2.7 34.2 + - - -
109C LEU* 3.9 10.6 - - + +
112F LEU* 3.0 43.0 + - + -
113F GLU* 3.7 6.3 - - - +
115F ASP* 1.3 73.9 - - - +
117F SER* 1.3 59.1 + - - +
119F LEU* 3.5 6.6 - - + +
120F SER* 2.8 26.9 + - - -
116G TYR* 3.9 18.2 - + - +
----------------------------------------------------------
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Residues in contact with SER 117 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
106A ASN* 3.6 13.7 + - - +
110A LYS* 3.3 15.6 + - - -
132E GLN* 4.3 9.0 - - - -
113F GLU* 2.4 37.2 + - - -
114F LYS* 3.9 7.9 - - - -
116F TYR* 1.3 76.7 - - - +
118F GLU* 1.3 64.3 + - - +
120F SER* 3.3 2.8 + - - -
121F ASN* 3.1 29.0 + - - +
----------------------------------------------------------
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Residues in contact with GLU 118 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
132E GLN* 2.8 32.0 + - - +
135E LYS* 3.1 37.7 + - + +
136E LEU* 4.0 12.5 - - + +
114F LYS* 3.2 33.9 + - - +
115F ASP* 3.7 5.9 - - - +
117F SER* 1.3 79.6 - - - +
119F LEU* 1.3 62.4 + - - +
121F ASN* 3.2 4.7 + - - +
122F ARG* 3.2 25.2 + - + +
208F IPA 3.8 27.3 - - + +
----------------------------------------------------------
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Residues in contact with LEU 119 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
102A PHE* 4.1 9.9 - - + -
98C LEU* 3.9 28.7 - - + +
101C ILE* 4.2 9.6 - - + +
102C PHE* 3.4 45.5 - - + +
105C LYS* 4.6 7.2 - - + -
115F ASP 2.7 21.3 + - - +
116F TYR* 3.2 8.5 + - + +
118F GLU* 1.3 71.5 - - - +
120F SER* 1.3 65.5 + - - +
122F ARG* 3.2 10.7 + - + +
123F TYR* 3.2 38.4 + - + -
208F IPA 3.4 19.5 - - + +
----------------------------------------------------------
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Residues in contact with SER 120 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
99A ASN* 4.2 2.1 + - - -
102A PHE* 3.7 27.8 - - - +
103A GLU* 3.7 25.1 - - - +
106A ASN* 3.5 17.0 - - - -
116F TYR 2.8 19.6 + - - -
117F SER* 3.7 3.8 - - - -
119F LEU* 1.3 73.6 - - - +
121F ASN* 1.3 63.1 + - - +
123F TYR* 3.3 5.0 + - - +
124F ASN* 3.1 27.1 + - - +
----------------------------------------------------------
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Residues in contact with ASN 121 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
132E GLN* 2.6 48.0 + - - +
117F SER* 3.1 12.5 + - - +
118F GLU 3.4 9.4 - - - +
119F LEU 3.1 0.2 - - - -
120F SER* 1.3 77.4 + - - +
122F ARG* 1.3 63.1 + - + +
124F ASN* 3.3 17.4 + - - +
125F GLU* 2.9 37.6 + - + +
----------------------------------------------------------
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Residues in contact with ARG 122 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
94C GLU* 3.2 25.0 + - - +
97C ASN* 4.0 0.4 - - - +
98C LEU* 3.6 27.7 - - + +
101C ILE* 4.0 8.1 - - - +
204C SO4 2.7 39.6 + - - -
136E LEU* 3.0 42.8 - - + +
118F GLU* 3.2 16.6 + - - +
119F LEU* 3.2 7.5 + - - +
121F ASN* 1.3 74.1 - - + +
123F TYR* 1.3 65.2 + - - +
125F GLU* 3.1 11.3 + - + +
126F GLN* 3.1 26.0 + - - +
208F IPA 4.2 19.5 - - - +
----------------------------------------------------------
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Residues in contact with TYR 123 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
95A ASN* 4.2 4.9 + - - +
99A ASN* 3.1 26.7 + - - +
102A PHE* 3.9 20.4 - + - -
95C ASN* 3.8 11.2 - - - -
98C LEU* 3.1 38.2 + - + -
99C ASN* 2.8 26.8 + - - -
102C PHE* 3.9 13.8 - + - -
119F LEU* 3.2 43.9 + - + -
120F SER* 3.7 5.4 - - - +
121F ASN 3.3 0.2 - - - -
122F ARG* 1.3 78.9 - - - +
124F ASN* 1.3 57.1 + - - +
126F GLN* 3.4 6.6 + - + +
127F LYS* 3.0 21.8 + - - +
123G TYR* 3.5 36.2 - + - +
----------------------------------------------------------
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Residues in contact with ASN 124 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
96A GLU* 4.4 4.4 - - - +
99A ASN* 3.2 34.5 + - - +
103A GLU* 4.0 20.4 + - - +
120F SER* 3.1 20.8 + - - +
121F ASN* 3.5 24.1 - - - +
122F ARG 3.2 0.2 - - - -
123F TYR* 1.3 73.6 - - - +
125F GLU* 1.3 68.3 + - - +
127F LYS* 3.5 3.6 + - - +
128F GLU* 2.9 33.3 + - + +
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Residues in contact with GLU 125 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
135E LYS 5.1 9.0 - - - +
136E LEU* 6.1 5.7 - - + -
121F ASN* 2.9 26.0 + - + +
122F ARG* 3.1 11.8 + - + +
124F ASN* 1.3 80.0 - - - +
126F GLN* 1.3 69.6 + - - +
128F GLU* 3.0 20.7 + - - +
129F LYS* 3.0 22.7 + - - +
202F DY 3.3 23.6 - - - -
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Residues in contact with GLN 126 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
95A ASN* 4.5 3.6 - - - +
91C LEU* 3.8 21.3 + - + +
94C GLU* 3.1 27.8 - - - +
95C ASN* 3.9 8.5 - - + +
98C LEU* 3.8 17.0 - - + -
122F ARG 3.1 13.3 + - - +
123F TYR* 3.6 9.4 - - + +
125F GLU* 1.3 77.6 - - - +
127F LYS* 1.3 63.9 + - - +
129F LYS* 3.1 31.5 + - - +
130F MET* 3.1 13.3 + - - +
204F SO4 2.8 30.3 + - - -
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Residues in contact with LYS 127 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
92A LYS* 3.8 25.2 - - + +
93A ASN* 5.8 0.2 - - - +
95A ASN* 3.0 30.2 - - - +
96A GLU* 3.4 47.8 - - - +
99A ASN* 3.5 14.6 - - - +
123F TYR 3.0 7.3 + - - +
124F ASN 3.6 5.8 - - - +
126F GLN* 1.3 76.8 - - - +
128F GLU* 1.3 58.6 + - + +
130F MET* 3.2 6.9 + - - +
131F ASP* 2.5 59.0 + - - +
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Residues in contact with GLU 128 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
80D LYS* 5.3 1.8 + - - -
124F ASN* 2.9 25.1 + - + +
125F GLU* 3.0 17.4 + - - +
127F LYS* 1.3 80.1 - - + +
129F LYS* 1.3 57.3 + - + +
131F ASP* 2.9 13.9 + - - +
132F GLN* 3.0 38.3 + - + +
202F DY 2.2 30.8 - - - -
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Residues in contact with LYS 129 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
91C LEU* 4.1 19.4 - - + +
125F GLU* 3.0 20.7 + - - +
126F GLN* 3.1 26.3 + - - +
128F GLU* 1.3 74.2 - - + +
130F MET* 1.3 60.1 + - - +
132F GLN* 3.3 9.3 + - - +
133F LEU* 2.9 29.3 + - - +
204F SO4 2.8 47.4 + - - +
----------------------------------------------------------
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Residues in contact with MET 130 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
88A LEU* 4.1 31.6 - - + +
91A LEU* 5.5 2.7 - - + -
92A LYS* 4.1 29.2 - - + +
95A ASN* 5.5 2.2 - - - +
88C LEU* 5.2 0.2 - - - -
91C LEU* 3.2 32.7 - - + +
126F GLN 3.1 10.8 + - - +
127F LYS* 3.2 12.8 + - - +
129F LYS* 1.3 73.4 - - - +
131F ASP* 1.3 66.5 + - - +
133F LEU* 3.3 22.8 + - - +
134F SER* 3.3 9.2 + - - -
130G MET* 3.2 35.4 - - + -
----------------------------------------------------------
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Residues in contact with ASP 131 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
92A LYS* 2.6 48.5 + - - +
127F LYS* 2.5 39.6 + - - +
128F GLU* 2.9 19.3 - - - +
129F LYS 3.2 0.2 - - - -
130F MET* 1.3 77.5 - - - +
132F GLN* 1.3 62.0 + - - +
134F SER* 3.1 5.8 + - - -
135F LYS* 2.9 47.4 + - - +
----------------------------------------------------------
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Residues in contact with GLN 132 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
76D LEU* 4.2 32.5 - - + +
128F GLU* 3.0 27.4 + - + +
129F LYS* 3.5 9.2 - - - +
131F ASP* 1.3 83.9 - - - +
133F LEU* 1.3 65.7 + - - +
135F LYS* 2.9 42.7 + - - +
----------------------------------------------------------
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Residues in contact with LEU 133 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
88A LEU* 3.3 18.8 - - + -
84C LEU* 3.3 31.4 - - + -
87C ASN* 3.4 45.0 + - + +
88C LEU* 4.2 9.4 - - + -
91C LEU* 3.7 21.8 - - + -
129F LYS 2.9 14.2 + - - +
130F MET* 3.3 14.6 - - - +
132F GLN* 1.3 78.2 - - - +
134F SER* 1.3 68.2 + - - +
135F LYS 3.8 3.3 - - - +
----------------------------------------------------------
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Residues in contact with SER 134 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
85A LEU* 5.6 12.8 - - - +
88A LEU* 5.0 10.5 - - - -
89A ASN* 4.3 20.4 + - - -
92A LYS* 5.1 4.7 + - - +
130F MET 3.3 7.5 + - - -
131F ASP* 3.1 11.3 + - - -
133F LEU* 1.3 88.7 - - - +
135F LYS* 1.3 68.1 + - - +
136F LEU* 3.2 5.9 + - - +
----------------------------------------------------------
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Residues in contact with LYS 135 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
92A LYS* 4.4 11.5 - - - +
131F ASP* 2.9 37.6 + - - +
132F GLN* 2.9 42.6 + - - +
133F LEU 3.8 3.0 - - - +
134F SER* 1.3 84.1 + - - +
136F LEU* 1.3 67.1 + - - +
----------------------------------------------------------
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A short description of the
analytical approach
The contact analysis used in this page
is based upon the approach
developed in:
Sobolev V., Wade R.C., Vriend G.
and Edelman M. PROTEINS (1996)
25, 120-129.
Contact legitimacy depends on the hydrophobic-hydrophilic
properties of the contacting atoms. In order to
define it, for each inter-atomic contact,
eight atom classes have been introduced:
I Hydrophilic - N and O that can donate and accept hydrogen bonds
(e.g., oxygen of hydroxyl group of Ser. or Thr)
II Acceptor - N or O that can only accept a hydrogen bond
III Donor - N that can only donate a hydrogen bond
IV Hydrophobic - Cl, Br, I and all C atoms that are not in
aromatic rings and do not have a covalent bond to
a N or O atom
V Aromatic - C in aromatic rings irrespective of any other
bonds formed by the atom
VI Neutral - C atoms that have a covalent bond to at least one
atom of class I or two or more atoms from class II
or III; atoms; S, F, P, and metal atoms in all cases
VII Neutral-donor - C atoms that have a covalent bond with only one
atom of class III
VIII Neutral-acceptor - C atoms that have a covalent bond with only
one atom of class II
For each pair of contacts the state of legitimacy
is shown below:
Legend:
+, legitimate
-, illegitimate
------------------------------------------------------------
Atomic class I II III IV V VI VII VIII
------------------------------------------------------------
I (Hydrophilic) + + + - + + + +
II (Acceptor) + - + - + + + -
III (Donor) + + - - + + - +
IV (Hydrophobic) - - - + + + + +
V (Aromatic) + + + + + + + +
VI (Neutral) + + + + + + + +
VII (Neutral-donor) + + - + + + - +
VIII (Neutral-acceptor) + - + + + + + -
------------------------------------------------------------
Warning!
Atom classes for heterogroups are automatically
assigned based on the atomic coordinates. However, in
three cases (see below) the automatic assignment
is currently ambiguous. In these
cases, the user is advised to manually analyse
the full list of contacts using
LPC software.
1. Carbon atoms belonging to a 4-, 5- or 6-member ring are
considered "aromatic" (Class V) if the ring is approximately
planar, and "hydrophobic" (Class IV) or "neutral" (Classes
VI, VII, VIII) if the ring is non-planar.
2. The oxygen atom of a carbonyl or hydroxy group is considered
"hydroxy" (Class I) if the CO bond is longer than 1.29 Å, and
"carbonyl" (Class II) if shorter.
3. All nitrogen atoms are considered "hydrophilic" (Class I).
Please E-mail any
questions and/or suggestions concerning this page to
Vladimir.Sobolev@weizmann.ac.il