Contacts of the helix formed by residues 50 - 134 (chain B) in PDB entry 4LL7
Residue contacts within the protein are
derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332). A
short description of the analytical approach
is given at the end of the page.
Note:
Non-standard 3 letter residue
codes indicate a heterogroup. To identify
and analyse, use LPC software
Legend:
Dist - nearest distance (Å) between atoms of two residues
Surf - contact surface area (Å2) between two residues
HB - hydrophilic-hydrophilic contact (hydrogen bond)
Arom - aromatic-aromatic contact
Phob - hydrophobic-hydrophobic contact
DC - hydrophobic-hydrophilic contact (destabilizing contact)
+/- - indicates presence/absence of a specific contacts
* - indicates residues forming contacts by their side chain
(including CA atoms)
Residues in contact with HIS 50 (chain B).
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
49B LEU* 1.3 79.2 - - - +
51B ASP* 1.3 59.4 + - - +
53B ILE* 4.1 14.1 - - + +
54B ASP* 3.3 42.7 + - - +
49D LEU* 4.5 10.4 - - + +
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Residues in contact with ASP 51 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
49B LEU 2.9 6.8 - - - +
50B HIS* 1.3 78.9 - - - +
52B GLN* 1.3 75.4 + - - +
54B ASP* 4.2 5.8 - - - +
55B MET* 3.4 29.4 + - - +
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Residues in contact with GLN 52 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
49B LEU* 2.8 23.5 + - + +
51B ASP* 1.3 91.8 + - - +
53B ILE* 1.3 59.1 + - - +
55B MET* 3.2 9.9 + - - +
56B LEU* 2.8 33.1 + - - +
53D ILE* 4.3 19.5 - - + -
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Residues in contact with ILE 53 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
49B LEU 3.1 13.9 + - - +
50B HIS* 4.1 15.3 - - + +
51B ASP 3.5 0.2 - - - -
52B GLN* 1.3 76.6 - - - +
54B ASP* 1.3 64.6 + - - +
56B LEU* 3.4 2.3 + - - +
57B THR* 2.9 35.3 + - - +
49D LEU* 4.0 9.4 - - + +
52D GLN* 3.4 14.4 - - + -
53D ILE* 3.1 55.2 - - + +
56D LEU* 3.3 24.3 - - + +
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Residues in contact with ASP 54 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
50B HIS* 3.3 37.0 + - - +
51B ASP* 4.2 6.7 - - - +
52B GLN 3.3 0.8 - - - -
53B ILE* 1.3 82.5 - - - +
55B MET* 1.3 61.0 + - + +
57B THR* 3.1 9.0 + - - -
58B LYS* 2.9 37.6 + - + +
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Residues in contact with MET 55 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
51B ASP* 3.4 26.5 + - - +
52B GLN* 3.2 13.6 + - - +
54B ASP* 1.3 78.6 - - - +
56B LEU* 1.3 58.2 + - - +
58B LYS* 3.2 14.6 + - - +
59B THR* 3.0 36.8 + - + +
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Residues in contact with LEU 56 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
52B GLN 2.8 18.0 + - - +
53B ILE 3.6 2.9 - - - +
55B MET* 1.3 75.4 - - - +
57B THR* 1.3 60.0 + - - +
59B THR* 2.5 28.4 + - + +
60B ASN* 3.0 14.0 + - - +
53D ILE* 3.3 16.4 - - + +
56D LEU* 2.7 55.0 - - + +
57D THR* 2.9 31.0 - - + +
60D ASN* 5.2 4.5 - - + +
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Residues in contact with THR 57 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
53B ILE* 2.9 22.8 + - - +
54B ASP* 3.1 11.9 + - - -
56B LEU* 1.3 75.2 - - - +
58B LYS* 1.3 59.9 + - + +
60B ASN* 3.2 7.7 + - + +
61B LEU* 2.8 54.4 + - + +
56D LEU* 3.8 23.0 - - + +
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Residues in contact with LYS 58 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
54B ASP* 2.9 23.6 + - - +
55B MET* 3.2 15.9 - - - +
57B THR* 1.3 78.7 - - + +
59B THR* 1.3 62.4 + - + +
61B LEU* 3.3 20.0 + - + +
62B GLN* 3.0 31.4 + - + +
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Residues in contact with THR 59 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
55B MET* 3.0 25.8 + - + +
56B LEU* 2.5 31.7 + - + +
58B LYS* 1.3 76.9 - - + +
60B ASN* 1.3 59.7 + - - +
62B GLN* 3.4 7.1 + - - +
63B LEU* 2.9 32.6 + - - +
60D ASN* 3.3 20.3 + - - -
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Residues in contact with ASN 60 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
56B LEU 3.0 12.9 + - - +
57B THR* 3.5 9.0 + - - +
59B THR* 1.3 82.4 + - - +
61B LEU* 1.3 68.5 + - - +
63B LEU 3.2 1.6 + - - -
64B THR* 3.0 9.4 + - - -
56D LEU* 4.8 4.2 - - + +
59D THR* 3.1 31.9 + - - +
60D ASN* 3.1 21.9 + - + +
63D LEU* 2.7 51.2 - - - +
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Residues in contact with LEU 61 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
57B THR* 2.8 44.8 + - + +
58B LYS* 3.6 23.6 - - + +
59B THR 3.3 0.2 - - - -
60B ASN* 1.3 83.2 - - - +
62B GLN* 1.3 64.0 + - + +
64B THR* 3.3 9.8 + - - +
65B THR* 3.1 28.8 + - - +
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Residues in contact with GLN 62 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
58B LYS* 3.0 28.5 + - + +
59B THR* 3.6 10.3 - - - +
60B ASN 3.3 0.2 - - - -
61B LEU* 1.3 78.6 - - + +
63B LEU* 1.3 61.0 + - + +
65B THR* 3.5 7.9 + - - -
66B GLN* 3.1 33.5 + - - +
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Residues in contact with LEU 63 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
59B THR* 2.9 26.2 + - - +
60B ASN 3.2 5.3 + - - +
62B GLN* 1.3 82.0 - - + +
64B THR* 1.3 60.2 + - - +
66B GLN* 3.3 7.8 + - - +
67B SER* 2.8 30.0 + - - -
60D ASN* 2.7 45.3 - - - +
63D LEU* 3.3 16.6 - - + +
64D THR* 2.7 32.8 - - + +
67D SER* 3.8 8.1 + - - +
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Residues in contact with THR 64 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
60B ASN* 3.0 10.4 + - - -
61B LEU* 3.7 12.8 - - - +
63B LEU* 1.3 75.0 - - - +
65B THR* 1.3 58.8 + - - +
67B SER* 2.4 26.1 + - - +
68B GLN* 2.9 34.8 + - + +
63D LEU* 2.6 31.5 - - - +
66D GLN* 4.8 5.2 - - - +
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Residues in contact with THR 65 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
61B LEU* 3.1 16.6 + - - +
62B GLN* 3.7 9.3 + - - -
64B THR* 1.3 75.5 - - - +
66B GLN* 1.3 65.4 + - - +
68B GLN* 3.2 13.9 + - + +
69B ASN* 2.9 29.3 + - + +
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Residues in contact with GLN 66 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
62B GLN* 3.1 20.8 + - - +
63B LEU* 3.5 7.2 - - - +
65B THR* 1.3 80.5 - - - +
67B SER* 1.3 62.8 + - - +
69B ASN* 3.2 9.7 + - + +
70B LEU* 3.0 38.2 + - + +
67D SER* 4.1 12.8 - - - +
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Residues in contact with SER 67 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
63B LEU 2.8 12.1 + - - -
64B THR* 2.4 24.3 + - - +
66B GLN* 1.3 79.1 - - - +
68B GLN* 1.3 57.5 + - - +
70B LEU* 4.6 0.4 - - - -
71B LEU* 3.0 14.7 + - - +
66D GLN* 2.5 54.4 + - - -
67D SER* 4.2 5.1 + - - +
70D LEU* 2.9 29.8 - - - +
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Residues in contact with GLN 68 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
64B THR* 2.9 34.9 + - + +
65B THR* 3.5 13.7 + - + +
67B SER* 1.3 84.1 + - - +
69B ASN* 1.3 63.7 + - - +
71B LEU* 3.3 14.0 + - + +
72B SER* 3.1 23.2 + - - -
66D GLN* 5.7 0.2 - - - +
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Residues in contact with ASN 69 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
65B THR* 2.9 15.9 + - + +
66B GLN* 3.2 14.8 + - + +
68B GLN* 1.3 77.6 - - - +
70B LEU* 1.3 65.4 + - - +
72B SER* 2.6 25.4 + - - -
73B LYS* 3.0 17.5 + - - +
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Residues in contact with LEU 70 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
66B GLN* 3.0 25.5 + - + +
69B ASN* 1.3 81.8 - - - +
71B LEU* 1.3 59.4 + - - +
73B LYS* 3.4 13.8 + - + +
74B LEU* 2.9 31.9 + - - +
67D SER* 3.2 40.8 - - - +
70D LEU* 3.1 31.6 - - + -
71D LEU* 4.0 26.0 - - + +
74D LEU* 3.8 11.5 - - + +
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Residues in contact with LEU 71 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
67B SER 3.0 17.3 + - - +
68B GLN* 3.6 13.0 - - + +
69B ASN 3.3 0.2 - - - -
70B LEU* 1.3 76.3 - - - +
72B SER* 1.3 59.2 + - - +
74B LEU* 3.4 9.7 + - + +
75B GLU* 2.9 32.2 + - + +
70D LEU* 3.7 15.6 - - + +
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Residues in contact with SER 72 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
68B GLN 3.1 11.6 + - - -
69B ASN* 2.6 30.7 + - - -
71B LEU* 1.3 76.0 - - - +
73B LYS* 1.3 61.4 + - - +
75B GLU* 3.2 11.3 + - - +
76B LEU* 2.9 30.2 + - - +
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Residues in contact with LYS 73 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
69B ASN* 3.0 16.7 + - - +
70B LEU* 3.6 15.7 - - + +
71B LEU 3.3 0.2 - - - -
72B SER* 1.3 82.2 + - - +
74B LEU* 1.3 62.9 + - - +
76B LEU* 3.3 18.8 + - + +
77B ALA* 3.1 23.7 + - + +
71D LEU* 6.0 2.6 - - - +
74D LEU* 3.2 39.4 - - + +
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Residues in contact with LEU 74 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
70B LEU 2.9 13.2 + - - +
71B LEU* 3.5 9.9 - - + +
73B LYS* 1.3 78.5 - - - +
75B GLU* 1.3 61.7 + - - +
77B ALA* 3.5 4.2 + - + +
78B GLN* 3.1 22.9 + - - +
70D LEU* 3.5 27.4 - - + +
73D LYS* 3.0 61.0 - - + +
74D LEU* 3.5 17.5 - - + +
77D ALA* 5.2 6.3 - - + -
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Residues in contact with GLU 75 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
71B LEU* 2.9 23.3 + - + +
72B SER* 3.6 10.0 - - - +
74B LEU* 1.3 76.2 - - - +
76B LEU* 1.3 66.2 + - - +
78B GLN* 3.3 19.6 - - + +
79B SER* 3.3 11.8 + - - -
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Residues in contact with LEU 76 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
72B SER 2.9 14.4 + - - +
73B LYS* 3.5 22.4 - - + +
74B LEU 3.1 0.2 - - - -
75B GLU* 1.3 79.1 - - - +
77B ALA* 1.3 68.5 + - + +
78B GLN 2.9 5.0 + - - -
79B SER* 3.0 10.8 + - - +
80B LYS* 2.8 47.5 + - + +
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Residues in contact with ALA 77 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
73B LYS* 3.1 13.6 + - + +
74B LEU* 4.0 5.8 - - + +
76B LEU* 1.3 84.1 - - + +
78B GLN* 1.3 53.1 + - - +
80B LYS* 3.0 15.0 - - + +
81B GLU* 2.7 36.3 + - - +
74D LEU* 5.3 5.6 - - + -
77D ALA* 4.7 19.5 - - + -
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Residues in contact with GLN 78 (chain B).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
74B LEU 3.1 15.0 + - - +
75B GLU* 3.3 16.6 - - + +
76B LEU 2.9 0.2 - - - -
77B ALA* 1.3 71.9 - - - +
79B SER* 1.3 57.0 + - - +
80B LYS 2.6 14.5 + - - -
81B GLU* 2.7 48.7 + - - +
82B SER* 2.7 23.8 + - - +
----------------------------------------------------------
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Residues in contact with SER 79 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
75B GLU* 3.3 11.3 + - - -
76B LEU* 3.0 14.1 + - - +
78B GLN* 1.3 79.4 - - - +
80B LYS* 1.3 64.1 + - - +
82B SER* 3.4 12.1 - - - -
83B LYS* 3.3 23.9 + - - +
----------------------------------------------------------
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Residues in contact with LYS 80 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
76B LEU* 2.8 35.2 + - + +
77B ALA* 3.0 16.3 - - - +
78B GLN 2.6 4.4 + - - -
79B SER* 1.3 73.4 + - - +
81B GLU* 1.3 66.7 + - - +
83B LYS* 3.0 18.3 + - + +
84B LEU* 3.0 13.2 + - + +
81D GLU* 5.3 13.0 - - - +
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Residues in contact with GLU 81 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
77B ALA 2.7 12.9 + - - +
78B GLN* 2.7 46.2 + - - +
80B LYS* 1.3 69.9 - - - +
82B SER* 1.3 68.6 + - - +
84B LEU* 3.1 11.1 + - - +
85B LEU* 3.0 42.3 + - + +
77D ALA* 6.0 2.1 - - - +
80D LYS* 5.1 10.7 - - - +
----------------------------------------------------------
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Residues in contact with SER 82 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
78B GLN* 2.7 23.4 + - - +
79B SER* 3.4 17.0 - - - -
80B LYS 3.1 0.2 - - - -
81B GLU* 1.3 74.1 - - - +
83B LYS* 1.3 57.5 + - - +
85B LEU* 2.8 32.7 + - - +
86B GLU* 3.0 30.0 + - - +
----------------------------------------------------------
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Residues in contact with LYS 83 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
79B SER 3.3 11.6 + - - +
80B LYS* 3.0 11.7 + - - +
82B SER* 1.3 80.4 + - - +
84B LEU* 1.3 62.5 + - - +
86B GLU* 3.3 19.3 + - + +
87B ASN* 2.7 52.7 + - - +
----------------------------------------------------------
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Residues in contact with LEU 84 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
80B LYS* 3.0 12.5 + - + +
81B GLU* 3.1 13.2 + - - +
83B LYS* 1.3 76.7 - - - +
85B LEU* 1.3 64.7 + - + +
87B ASN* 4.3 2.5 - - - +
88B LEU* 3.1 36.4 + - + +
81D GLU* 4.8 11.9 - - - +
84D LEU* 3.4 37.7 - - + -
85D LEU* 5.7 3.6 - - + -
88D LEU* 4.6 9.9 - - + -
133H LEU* 4.0 35.9 - - + +
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Residues in contact with LEU 85 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
81B GLU* 3.0 36.3 + - + +
82B SER* 2.8 12.2 + - - +
84B LEU* 1.3 80.7 - - + +
86B GLU* 1.3 54.7 + - + +
88B LEU* 3.2 11.8 - - + +
89B ASN* 2.5 44.7 + - - +
84D LEU* 5.7 8.3 - - + -
134E SER* 4.5 20.6 - - - -
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Residues in contact with GLU 86 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
82B SER* 3.0 27.5 + - - +
83B LYS* 3.3 26.2 + - + +
85B LEU* 1.3 73.9 - - + +
87B ASN* 1.3 67.2 + - - +
88B LEU 3.1 1.1 - - - -
89B ASN* 3.1 10.1 + - - +
90B LEU* 3.0 27.4 + - + +
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Residues in contact with ASN 87 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
83B LYS* 2.7 56.0 + - - +
84B LEU* 4.3 1.3 - - - +
86B GLU* 1.3 75.5 - - - +
88B LEU* 1.3 63.0 + - - +
90B LEU* 3.1 21.3 + - - +
91B LEU* 3.0 27.0 + - - +
133H LEU* 3.3 35.8 - - + +
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Residues in contact with LEU 88 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
84B LEU* 3.1 35.7 + - + +
85B LEU* 3.2 13.0 - - + +
87B ASN* 1.3 80.7 - - - +
89B ASN* 1.3 55.9 + - - +
91B LEU* 3.5 3.6 + - - +
92B LYS* 2.9 28.3 + - - +
84D LEU* 4.2 16.6 - - + -
88D LEU* 4.1 7.6 - - + -
130E MET* 3.5 36.7 - - + +
133E LEU* 4.9 3.1 - - + +
134E SER* 4.4 20.6 - - - +
130H MET* 3.8 10.3 - - + -
133H LEU* 3.6 21.8 - - + -
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Residues in contact with ASN 89 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
85B LEU* 2.5 39.7 + - - +
86B GLU* 3.1 9.6 + - - +
88B LEU* 1.3 76.4 - - - +
90B LEU* 1.3 62.8 + - - +
92B LYS* 3.5 23.1 - - + +
93B ASN* 3.1 20.8 + - - +
134E SER* 4.9 14.3 + - - +
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Residues in contact with LEU 90 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
86B GLU* 3.0 17.1 + - + +
87B ASN* 3.4 26.7 - - - +
89B ASN* 1.3 72.7 - - - +
91B LEU* 1.3 71.3 + - + +
93B ASN* 2.9 18.2 + - - +
94B GLU* 3.2 12.1 + - - +
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Residues in contact with LEU 91 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
87B ASN 3.0 11.1 + - - +
88B LEU* 3.6 6.1 - - - +
90B LEU* 1.3 83.2 - - + +
92B LYS* 1.3 56.7 + - - +
94B GLU* 3.2 5.0 + - - +
95B ASN* 2.9 28.9 + - - +
130E MET* 5.9 2.7 - - + -
126H GLN* 3.7 28.2 + - + +
129H LYS* 4.0 28.9 - - + +
130H MET* 3.3 48.5 - - + +
133H LEU* 3.7 18.4 - - + -
----------------------------------------------------------
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Residues in contact with LYS 92 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
88B LEU 2.9 18.0 + - - +
89B ASN* 3.5 25.1 - - + +
91B LEU* 1.3 77.1 - - - +
93B ASN* 1.3 66.5 + - - +
95B ASN* 3.0 17.9 + - - +
96B GLU* 3.0 13.3 + - - +
127E LYS* 4.0 24.2 - - + +
130E MET* 4.8 14.3 - - + +
131E ASP* 2.4 46.3 + - + +
134E SER* 6.0 1.3 - - - +
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Residues in contact with ASN 93 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
89B ASN 3.1 9.3 + - - +
90B LEU* 2.9 11.4 + - - +
92B LYS* 1.3 83.3 - - + +
94B GLU* 1.3 61.2 + - - +
96B GLU* 3.4 7.2 + - - +
97B ASN* 3.1 23.2 + - - +
209B EDO 3.1 28.4 + - - -
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Residues in contact with GLU 94 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
90B LEU 3.2 10.5 + - - +
91B LEU 3.8 1.6 - - - +
93B ASN* 1.3 79.0 + - - +
95B ASN* 1.3 59.7 + - - +
97B ASN* 2.9 30.5 + - - +
98B LEU* 3.0 38.6 + - + +
122H ARG* 3.4 17.3 + - - -
126H GLN* 3.2 38.4 - - + +
----------------------------------------------------------
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Residues in contact with ASN 95 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
91B LEU 2.9 13.4 + - - +
92B LYS* 3.0 12.8 + - - +
94B GLU* 1.3 77.5 - - - +
96B GLU* 1.3 57.8 + - - +
98B LEU* 3.4 5.8 + - - +
99B ASN* 2.9 41.9 + - - +
95D ASN* 5.4 6.5 + - - +
123E TYR* 4.7 5.1 + - - -
126E GLN* 4.9 1.9 - - - +
127E LYS* 3.6 21.3 + - + +
207E PT 2.5 28.0 - - - -
123H TYR* 4.0 14.6 - - - -
126H GLN* 4.5 5.6 - - + +
----------------------------------------------------------
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Residues in contact with GLU 96 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
92B LYS* 3.0 10.8 + - + +
93B ASN* 3.5 10.5 - - - +
94B GLU 3.2 0.2 - - - -
95B ASN* 1.3 76.2 - - - +
97B ASN* 1.3 62.9 + - - +
99B ASN* 3.2 9.5 + - - +
100B SER* 2.9 34.0 + - - +
202B DY 4.0 16.1 - - - -
209B EDO 3.5 25.5 - - - -
124E ASN* 5.4 0.7 - - - +
127E LYS* 2.5 46.6 + - - +
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Residues in contact with ASN 97 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
93B ASN* 3.1 15.1 + - - +
94B GLU* 2.9 36.1 + - - +
96B GLU* 1.3 77.4 - - - +
98B LEU* 1.3 60.7 + - - +
100B SER* 3.4 3.5 + - - -
101B ILE* 3.2 26.1 + - - +
206B SO4 2.6 33.9 + - - -
209B EDO 3.2 21.9 + - - +
122H ARG* 4.0 1.2 - - - +
----------------------------------------------------------
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Residues in contact with LEU 98 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
94B GLU* 3.0 37.1 + - + +
95B ASN* 3.7 4.0 - - - +
96B GLU 3.2 0.2 - - - -
97B ASN* 1.3 75.9 - - - +
99B ASN* 1.3 65.1 + - - +
101B ILE* 3.1 6.8 + - + +
102B PHE* 3.0 20.1 + - - +
119H LEU* 3.9 11.2 - - + +
122H ARG* 3.7 33.7 - - + +
123H TYR* 3.3 57.6 + - + +
126H GLN* 3.8 25.1 - - + -
----------------------------------------------------------
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Residues in contact with ASN 99 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
95B ASN* 2.9 27.6 + - - +
96B GLU* 3.2 11.7 + - - +
98B LEU* 1.3 74.5 - - - +
100B SER* 1.3 60.4 + - - +
102B PHE* 3.5 4.7 + - - +
103B GLU* 2.9 31.8 + - - +
120E SER* 4.6 1.2 + - - -
123E TYR* 3.3 32.1 + - - +
124E ASN* 3.0 31.0 + - - +
127E LYS* 3.7 21.4 - - - +
123H TYR* 2.7 26.6 + - - -
----------------------------------------------------------
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Residues in contact with SER 100 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
96B GLU* 2.9 27.5 + - - -
97B ASN* 3.6 6.7 - - - -
98B LEU 3.1 0.2 - - - -
99B ASN* 1.3 75.4 - - - +
101B ILE* 1.3 65.5 + - - +
103B GLU* 3.4 13.6 + - - +
104B ARG* 3.1 23.5 + - - +
209B EDO 3.7 15.4 + - - -
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Residues in contact with ILE 101 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
97B ASN* 3.2 18.6 - - - +
98B LEU* 3.1 15.3 + - + +
100B SER* 1.3 73.6 - - - +
102B PHE* 1.3 68.5 + - - +
104B ARG* 2.9 37.4 + - - +
105B LYS* 3.0 38.9 + - + +
205B SO4 4.5 5.8 - - - +
206B SO4 3.7 19.7 - - - +
115H ASP 5.9 0.2 - - - +
119H LEU* 4.2 15.9 - - + -
122H ARG* 3.7 28.7 - - - +
----------------------------------------------------------
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Residues in contact with PHE 102 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
98B LEU 3.0 11.2 + - - +
99B ASN* 3.6 9.2 - - - +
100B SER 3.3 0.2 - - - -
101B ILE* 1.3 76.5 - - - +
103B GLU* 1.3 63.0 + - - +
105B LYS* 3.1 3.3 + - - +
106B ASN* 2.9 45.7 + - - -
102D PHE* 3.9 16.6 - + - -
116E TYR* 3.7 29.2 - + - -
119E LEU* 3.9 15.5 - - + -
120E SER* 3.6 30.3 - - - +
123E TYR* 4.1 7.4 - + + -
116H TYR* 3.5 19.3 - + - -
119H LEU* 3.5 19.5 - - + +
123H TYR* 4.0 20.9 - + - +
----------------------------------------------------------
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Residues in contact with GLU 103 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
99B ASN* 2.9 24.1 + - - +
100B SER* 3.6 9.3 + - - +
101B ILE 3.2 0.4 - - - -
102B PHE* 1.3 75.7 - - - +
104B ARG* 1.3 61.4 + - - +
106B ASN* 3.4 8.9 + - - +
107B LYS* 3.2 30.7 + - - +
202B DY 2.6 29.4 - - - -
120E SER* 3.7 15.5 - - - +
124E ASN* 3.6 20.9 + - - +
----------------------------------------------------------
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Residues in contact with ARG 104 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
100B SER 3.1 11.9 + - - +
101B ILE* 2.9 39.7 + - - +
103B GLU* 1.3 77.4 - - - +
105B LYS* 1.3 74.5 + - + +
107B LYS* 3.1 26.0 + - - +
108B LYS* 3.2 11.3 + - - +
205B SO4 2.9 42.4 + - - -
206B SO4 5.5 2.0 + - - -
----------------------------------------------------------
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Residues in contact with LYS 105 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
101B ILE* 3.0 30.9 + - + +
102B PHE* 3.6 7.9 - - - +
104B ARG* 1.3 82.2 - - + +
106B ASN* 1.3 66.2 + - - +
108B LYS* 3.1 10.4 + - + +
109B LEU* 3.0 19.6 + - - +
205B SO4 3.2 37.0 + - - -
112H LEU* 4.2 9.8 - - + +
115H ASP* 2.8 46.3 + - + +
116H TYR* 3.3 31.7 + - + +
119H LEU* 4.8 3.6 - - + -
----------------------------------------------------------
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Residues in contact with ASN 106 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
205A SO4 5.4 1.6 + - - -
102B PHE* 2.9 30.4 + - - +
103B GLU* 3.6 8.8 - - - +
105B LYS* 1.3 75.3 - - - +
107B LYS* 1.3 63.3 + - - +
109B LEU* 3.3 4.0 + - - +
110B LYS* 3.0 44.0 + - - +
113E GLU 5.7 0.2 - - - -
116E TYR* 3.3 36.4 + - - +
117E SER* 3.6 7.5 - - - +
120E SER* 3.3 21.2 + - - -
116H TYR* 2.9 18.4 + - - -
----------------------------------------------------------
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Residues in contact with LYS 107 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
103B GLU* 3.2 21.5 + - - +
104B ARG* 3.1 20.0 + - - +
106B ASN* 1.3 77.4 - - - +
108B LYS* 1.3 61.4 + - - +
110B LYS* 3.7 8.9 + - + +
111B GLU* 3.1 27.2 + - - +
----------------------------------------------------------
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Residues in contact with LYS 108 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
104B ARG 3.2 7.5 + - - +
105B LYS* 3.1 12.6 + - + +
107B LYS* 1.3 79.7 - - - +
109B LEU* 1.3 51.2 + - - +
111B GLU* 3.3 13.8 + - + +
112B LEU* 2.6 39.1 + - + +
108H LYS* 3.5 43.2 + - + +
111H GLU* 3.5 30.5 + - - +
112H LEU* 3.2 25.7 - - + +
115H ASP* 4.7 5.1 + - - +
----------------------------------------------------------
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Residues in contact with LEU 109 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
105B LYS 3.0 12.6 + - - +
106B ASN* 3.7 5.2 - - - +
107B LYS 3.3 0.2 - - - -
108B LYS* 1.3 73.6 - - - +
110B LYS* 1.3 56.1 + - + +
112B LEU* 2.9 6.3 + - + +
113B GLU* 2.6 37.8 + - - +
109D LEU* 5.0 4.0 - - + -
109E LEU* 3.7 29.6 - - + -
112E LEU* 4.6 1.3 - - + -
113E GLU* 4.1 26.9 - - + +
116E TYR* 3.8 33.2 - - + -
109H LEU* 4.9 9.6 - - + -
112H LEU* 3.5 26.8 - - + +
116H TYR* 3.9 8.7 - - + +
----------------------------------------------------------
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Residues in contact with LYS 110 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
128A GLU* 5.0 5.0 - - - +
205A SO4 4.6 7.2 - - - -
212A DTT 3.4 44.7 - - + +
106B ASN* 3.0 31.5 + - - +
107B LYS* 4.1 9.2 - - + +
109B LEU* 1.3 76.5 - - + +
111B GLU* 1.3 63.3 + - - +
113B GLU* 4.0 0.5 - - - +
114B LYS* 3.1 22.5 + - - +
113E GLU* 3.0 47.2 + - + +
117E SER* 2.4 32.0 + - - -
----------------------------------------------------------
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Residues in contact with GLU 111 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
107B LYS* 3.1 19.4 + - - +
108B LYS* 3.3 11.6 - - - +
109B LEU 3.0 0.2 - - - -
110B LYS* 1.3 79.6 - - - +
112B LEU* 1.3 63.1 + - - +
114B LYS* 3.0 18.3 + - - +
115B ASP* 3.2 20.9 + - - +
108H LYS* 6.2 1.3 - - - +
----------------------------------------------------------
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Residues in contact with LEU 112 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
108B LYS* 2.6 23.9 + - + +
109B LEU* 3.5 8.5 - - + +
111B GLU* 1.3 73.9 - - - +
113B GLU* 1.3 61.8 + - - +
115B ASP* 3.3 16.8 + - - +
116B TYR* 3.2 29.3 + - + -
109E LEU* 5.6 0.2 - - + -
105H LYS* 3.8 43.3 - - + +
108H LYS* 3.9 18.4 - - + -
109H LEU* 3.5 46.0 - - + +
112H LEU* 4.4 12.6 - - + -
----------------------------------------------------------
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Residues in contact with GLU 113 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
128A GLU* 3.4 4.9 - - - +
201A DY 2.4 29.9 - - - -
109B LEU 2.6 14.6 + - - +
112B LEU* 1.3 70.3 - - - +
114B LYS* 1.3 65.5 + - - +
115B ASP 3.0 2.0 - - - -
116B TYR* 3.2 3.7 + - + +
117B SER* 2.7 33.3 + - - -
106E ASN* 4.8 3.5 - - - +
109E LEU* 3.7 35.9 - - + +
110E LYS* 2.7 42.2 + - + +
113E GLU* 2.6 30.6 - - + +
----------------------------------------------------------
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Residues in contact with LYS 114 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
127A LYS* 4.7 6.7 - - - +
128A GLU* 3.7 38.1 - - + +
131A ASP* 3.8 26.0 + - - -
132A GLN* 3.3 25.8 - - - +
208A SO4 5.6 6.8 + - - -
110B LYS 3.1 11.5 + - - +
111B GLU* 3.0 12.1 + - - +
113B GLU* 1.3 83.4 + - - +
115B ASP* 1.3 65.5 + - - +
117B SER* 3.5 4.3 + - - -
118B GLU* 3.2 37.7 + - - +
110E LYS* 6.0 0.2 - - - +
----------------------------------------------------------
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Residues in contact with ASP 115 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
111B GLU* 3.2 14.8 + - - +
112B LEU* 3.3 14.7 - - - +
114B LYS* 1.3 80.3 - - - +
116B TYR* 1.3 59.9 + - - +
118B GLU* 5.1 3.5 - - - +
119B LEU* 2.9 28.3 + - - +
201B DY 2.4 28.0 - - - -
207B SO4 2.9 21.9 + - - +
105H LYS* 2.6 46.4 + - + +
108H LYS* 4.2 6.1 + - - -
----------------------------------------------------------
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Residues in contact with TYR 116 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
112B LEU* 3.2 37.2 + - + -
113B GLU* 3.2 8.6 + - + +
115B ASP* 1.3 75.3 - - - +
117B SER* 1.3 60.6 + - - +
119B LEU* 3.6 6.0 - - + +
120B SER* 2.9 23.7 + - - -
116D TYR* 3.8 20.2 - + - +
102E PHE* 3.7 13.2 - + - -
106E ASN* 3.2 28.1 + - - +
109E LEU* 3.5 23.8 - - + -
102H PHE* 3.6 15.5 - + - -
105H LYS* 3.5 22.6 + - + -
106H ASN* 2.5 41.1 + - - -
109H LEU* 3.6 16.7 - - + +
----------------------------------------------------------
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Residues in contact with SER 117 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
132A GLN* 3.8 21.5 - - - -
113B GLU* 2.7 31.8 + - - -
114B LYS* 3.7 9.4 - - - -
116B TYR* 1.3 76.7 - - - +
118B GLU* 1.3 62.9 + - - +
120B SER* 3.2 4.7 + - - -
121B ASN* 3.2 27.5 + - - -
106E ASN* 3.8 15.1 + - - +
110E LYS* 3.6 12.0 + - - -
----------------------------------------------------------
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Residues in contact with GLU 118 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
131A ASP* 5.8 0.2 - - - +
132A GLN* 3.8 20.6 - - + +
135A LYS* 2.8 41.7 - - + +
208A SO4 5.2 6.2 + - - -
114B LYS* 3.2 35.1 + - - +
115B ASP* 5.1 3.4 - - - +
117B SER* 1.3 77.0 - - - +
119B LEU* 1.3 64.7 + - - +
121B ASN* 3.3 10.0 + - - +
122B ARG* 3.1 30.4 + - - +
207B SO4 3.0 28.7 + - - +
----------------------------------------------------------
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Residues in contact with LEU 119 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
115B ASP 2.9 19.3 + - - +
116B TYR* 3.6 8.3 - - + +
117B SER 3.3 0.2 - - - -
118B GLU* 1.3 76.5 - - - +
120B SER* 1.3 63.9 + - - +
122B ARG* 3.3 4.7 + - - +
123B TYR* 3.2 44.7 + - + -
207B SO4 3.5 8.2 + - - +
102E PHE* 4.1 7.2 - - + -
98H LEU* 3.9 30.3 - - + +
101H ILE* 4.2 17.7 - - + +
102H PHE* 3.5 48.2 - - + +
105H LYS* 4.8 6.7 - - + -
----------------------------------------------------------
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Residues in contact with SER 120 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
116B TYR 2.9 18.1 + - - -
117B SER* 3.4 5.4 - - - -
118B GLU 3.2 0.2 - - - -
119B LEU* 1.3 77.6 - - - +
121B ASN* 1.3 64.5 + - - +
123B TYR* 3.1 5.2 + - - +
124B ASN* 3.0 28.1 + - - +
99E ASN* 4.4 1.4 + - - -
102E PHE* 3.6 33.9 - - - +
103E GLU* 3.8 17.9 - - - +
106E ASN* 3.4 16.8 + - - -
----------------------------------------------------------
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Residues in contact with ASN 121 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
132A GLN* 3.6 34.6 - - - +
136A LEU 5.5 8.3 - - - -
117B SER* 3.2 15.0 + - - +
118B GLU* 3.3 8.9 + - - +
120B SER* 1.3 77.0 - - - +
122B ARG* 1.3 59.4 + - + +
124B ASN* 3.0 21.1 + - - +
125B GLU* 2.9 34.4 + - + +
----------------------------------------------------------
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Residues in contact with ARG 122 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
136A LEU 3.9 19.1 + - - +
118B GLU* 3.1 18.3 + - + +
119B LEU* 3.6 8.7 - - - +
120B SER 3.2 0.2 - - - -
121B ASN* 1.3 79.5 - - + +
123B TYR* 1.3 60.7 + - - +
125B GLU* 3.4 9.9 + - - +
126B GLN* 3.1 29.2 + - - +
204B SO4 2.9 44.1 + - - -
207B SO4 3.4 26.2 + - - -
94H GLU* 3.4 22.0 + - - -
97H ASN* 3.5 1.9 - - - +
98H LEU* 3.4 27.5 - - + +
101H ILE* 4.0 3.0 - - - +
----------------------------------------------------------
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Residues in contact with TYR 123 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
119B LEU* 3.2 45.6 + - + -
120B SER* 3.1 6.8 + - - +
122B ARG* 1.3 74.5 - - - +
124B ASN* 1.3 60.6 + - - +
126B GLN* 3.3 6.2 + - + +
127B LYS* 3.0 27.7 + - - +
123D TYR* 3.5 35.2 - + - +
95E ASN* 4.3 7.1 + - - +
99E ASN* 3.2 19.5 + - - +
102E PHE* 3.7 20.2 - + + -
95H ASN* 4.2 11.0 - - - -
98H LEU* 3.2 39.0 + - + -
99H ASN* 2.8 26.8 + - - -
102H PHE* 3.9 11.5 - + - -
----------------------------------------------------------
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Residues in contact with ASN 124 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
120B SER* 3.0 17.2 + - - +
121B ASN* 3.0 26.0 + - - +
123B TYR* 1.3 77.0 - - - +
125B GLU* 1.3 59.7 + - + +
127B LYS* 3.4 3.2 + - - +
128B GLU* 2.8 34.1 + - + +
99E ASN* 3.3 33.4 + - - +
103E GLU* 3.8 24.5 + - - +
----------------------------------------------------------
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Residues in contact with GLU 125 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
135A LYS 5.0 0.9 - - - +
136A LEU* 2.7 47.3 - - - +
121B ASN* 2.9 17.3 + - + +
122B ARG* 3.7 10.7 - - - +
123B TYR 3.2 0.4 - - - -
124B ASN* 1.3 76.5 - - + +
126B GLN* 1.3 67.0 + - - +
128B GLU* 3.1 11.5 + - - +
129B LYS* 2.9 39.4 + - - +
203B DY 4.4 11.2 - - - -
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Residues in contact with GLN 126 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
122B ARG* 3.1 17.1 + - - +
123B TYR* 3.7 8.1 - - + +
125B GLU* 1.3 81.4 + - - +
127B LYS* 1.3 58.0 + - - +
129B LYS* 3.0 39.7 + - - +
130B MET* 2.9 27.0 + - - +
208B PT 4.0 1.9 - - - -
95E ASN* 4.5 3.6 - - - +
91H LEU* 3.6 29.5 - - + +
94H GLU* 3.6 29.3 - - + +
95H ASN* 5.4 7.0 - - + +
98H LEU* 3.8 18.1 - - + +
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Residues in contact with LYS 127 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
123B TYR 3.0 6.9 + - - +
124B ASN 3.6 5.4 - - - +
126B GLN* 1.3 76.5 - - - +
128B GLU* 1.3 62.4 + - + +
130B MET* 3.3 2.9 + - - +
131B ASP* 2.8 44.3 + - - +
208B PT 4.1 1.3 - - - -
92E LYS* 3.0 41.6 - - + +
93E ASN* 5.4 0.4 + - - -
95E ASN* 2.9 31.6 - - + +
96E GLU* 2.6 37.8 + - + +
99E ASN* 3.4 24.7 - - - +
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Residues in contact with GLU 128 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
124B ASN* 2.8 25.7 - - + +
125B GLU* 3.1 11.1 + - - +
127B LYS* 1.3 76.5 - - + +
129B LYS* 1.3 64.7 + - + +
131B ASP* 3.1 22.7 + - - +
132B GLN* 3.2 22.2 + - - +
203B DY 2.1 31.7 - - - -
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Residues in contact with LYS 129 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
125B GLU* 2.9 22.6 + - - +
126B GLN* 3.0 42.6 + - - +
128B GLU* 1.3 77.0 - - + +
130B MET* 1.3 62.0 + - - +
132B GLN* 3.2 17.2 + - - +
133B LEU* 3.1 24.9 - - + +
90H LEU* 6.1 3.0 - - - +
91H LEU* 4.1 19.2 - - + +
94H GLU* 5.4 2.0 - - - +
----------------------------------------------------------
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Residues in contact with MET 130 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
126B GLN 2.9 7.9 + - - +
127B LYS* 3.4 9.0 - - - +
128B GLU 3.2 0.2 - - - -
129B LYS* 1.3 79.1 - - - +
131B ASP* 1.3 61.2 + - - +
132B GLN 3.4 0.2 + - - -
133B LEU* 3.5 21.8 + - - +
134B SER* 4.1 4.0 + - - -
208B PT 3.0 36.1 - - - -
130D MET* 4.0 32.8 - - + -
88E LEU* 4.1 28.0 - - + +
91E LEU* 4.7 11.7 - - + -
92E LYS* 3.9 24.9 - - + +
88H LEU* 5.0 0.2 - - - -
91H LEU* 4.3 20.6 - - + +
95H ASN* 6.1 1.6 - - - +
----------------------------------------------------------
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Residues in contact with ASP 131 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
127B LYS* 2.8 37.7 + - - +
128B GLU* 3.1 17.8 + - - +
130B MET* 1.3 76.1 - - - +
132B GLN* 1.3 70.1 + - - +
134B SER* 3.4 6.8 + - - +
135B LYS* 3.2 22.7 + - + +
92E LYS* 2.7 45.6 + - - +
----------------------------------------------------------
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Residues in contact with GLN 132 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
128B GLU* 3.2 17.6 + - - +
129B LYS* 3.2 14.3 + - - +
131B ASP* 1.3 81.6 - - - +
133B LEU* 1.3 69.1 + - + +
135B LYS* 3.1 37.8 + - - +
136B LEU* 4.8 5.4 - - - +
73G LYS* 5.3 4.7 + - - -
76G LEU* 3.7 33.5 - - + +
----------------------------------------------------------
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Residues in contact with LEU 133 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
129B LYS* 3.1 20.0 - - + +
130B MET* 3.7 13.7 - - - +
131B ASP 3.3 0.4 - - - -
132B GLN* 1.3 79.7 - - + +
134B SER* 1.3 59.3 + - - +
135B LYS 3.9 0.5 + - - -
136B LEU* 5.0 3.8 - - - +
88E LEU* 5.2 4.9 - - + -
84H LEU* 4.0 24.6 - - + +
87H ASN* 3.8 35.4 - - + +
88H LEU* 3.4 33.4 - - + -
91H LEU* 3.8 17.9 - - + -
----------------------------------------------------------
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Residues in contact with SER 134 (chain B).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
130B MET 4.1 3.7 + - - -
131B ASP 3.4 8.7 + - - +
132B GLN 3.1 0.2 - - - -
133B LEU* 1.3 80.8 - - - +
135B LYS* 1.3 61.3 + - - +
136B LEU 3.6 6.7 - - - +
85E LEU* 2.6 38.4 - - - +
88E LEU* 5.1 12.1 - - - -
89E ASN* 4.6 15.0 + - - +
92E LYS* 5.7 2.3 + - - -
84H LEU* 6.4 0.2 - - - -
----------------------------------------------------------
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A short description of the
analytical approach
The contact analysis used in this page
is based upon the approach
developed in:
Sobolev V., Wade R.C., Vriend G.
and Edelman M. PROTEINS (1996)
25, 120-129.
Contact legitimacy depends on the hydrophobic-hydrophilic
properties of the contacting atoms. In order to
define it, for each inter-atomic contact,
eight atom classes have been introduced:
I Hydrophilic - N and O that can donate and accept hydrogen bonds
(e.g., oxygen of hydroxyl group of Ser. or Thr)
II Acceptor - N or O that can only accept a hydrogen bond
III Donor - N that can only donate a hydrogen bond
IV Hydrophobic - Cl, Br, I and all C atoms that are not in
aromatic rings and do not have a covalent bond to
a N or O atom
V Aromatic - C in aromatic rings irrespective of any other
bonds formed by the atom
VI Neutral - C atoms that have a covalent bond to at least one
atom of class I or two or more atoms from class II
or III; atoms; S, F, P, and metal atoms in all cases
VII Neutral-donor - C atoms that have a covalent bond with only one
atom of class III
VIII Neutral-acceptor - C atoms that have a covalent bond with only
one atom of class II
For each pair of contacts the state of legitimacy
is shown below:
Legend:
+, legitimate
-, illegitimate
------------------------------------------------------------
Atomic class I II III IV V VI VII VIII
------------------------------------------------------------
I (Hydrophilic) + + + - + + + +
II (Acceptor) + - + - + + + -
III (Donor) + + - - + + - +
IV (Hydrophobic) - - - + + + + +
V (Aromatic) + + + + + + + +
VI (Neutral) + + + + + + + +
VII (Neutral-donor) + + - + + + - +
VIII (Neutral-acceptor) + - + + + + + -
------------------------------------------------------------
Warning!
Atom classes for heterogroups are automatically
assigned based on the atomic coordinates. However, in
three cases (see below) the automatic assignment
is currently ambiguous. In these
cases, the user is advised to manually analyse
the full list of contacts using
LPC software.
1. Carbon atoms belonging to a 4-, 5- or 6-member ring are
considered "aromatic" (Class V) if the ring is approximately
planar, and "hydrophobic" (Class IV) or "neutral" (Classes
VI, VII, VIII) if the ring is non-planar.
2. The oxygen atom of a carbonyl or hydroxy group is considered
"hydroxy" (Class I) if the CO bond is longer than 1.29 Å, and
"carbonyl" (Class II) if shorter.
3. All nitrogen atoms are considered "hydrophilic" (Class I).
Please E-mail any
questions and/or suggestions concerning this page to
Vladimir.Sobolev@weizmann.ac.il