Contacts of the strand formed by residues 799 - 806 (chain D) in PDB entry 5ON2
Residue contacts within the protein are
derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332). A
short description of the analytical approach
is given at the end of the page.
Note:
Non-standard 3 letter residue
codes indicate a heterogroup. To identify
and analyse, use LPC software
Legend:
Dist - nearest distance (Å) between atoms of two residues
Surf - contact surface area (Å2) between two residues
HB - hydrophilic-hydrophilic contact (hydrogen bond)
Arom - aromatic-aromatic contact
Phob - hydrophobic-hydrophobic contact
DC - hydrophobic-hydrophilic contact (destabilizing contact)
+/- - indicates presence/absence of a specific contacts
* - indicates residues forming contacts by their side chain
(including CA atoms)
Residues in contact with SER 799 (chain D).
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Specific contacts
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Residue Dist Surf HB Arom Phob DC
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797D GLU* 3.8 24.0 - - - +
798D ASP* 1.3 89.5 + - - +
800D THR* 1.3 65.3 + - - +
815D THR* 3.6 21.6 - - - +
816D VAL 3.3 14.8 - - - -
817D PRO* 4.8 1.8 - - - -
818D VAL* 4.3 2.9 - - - +
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Residues in contact with THR 800 (chain D).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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797D GLU* 6.1 0.4 - - - -
799D SER* 1.3 76.6 - - - +
801D LEU* 1.3 68.0 + - - +
802D VAL* 4.7 0.9 - - + -
815D THR* 3.5 6.8 - - - -
816D VAL* 2.7 54.4 + - + +
817D PRO 3.5 14.8 - - - +
818D VAL* 4.9 6.5 - - - +
852D GLY* 3.2 35.0 + - - -
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Residues in contact with LEU 801 (chain D).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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800D THR* 1.3 75.7 + - - +
802D VAL* 1.3 72.9 + - - +
803D VAL* 5.1 2.9 - - + +
813D LYS* 4.4 20.2 - - + -
814D ILE 3.7 15.9 - - - +
815D THR* 5.0 2.9 - - - +
852D GLY 3.2 21.3 - - - +
853D LYS* 4.1 4.2 + - - +
20E U 3.4 37.0 - - + +
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Residues in contact with VAL 802 (chain D).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
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800D THR* 4.5 0.7 - - + +
801D LEU* 1.3 83.6 - - - +
803D VAL* 1.3 75.7 + - - +
804D VAL* 3.9 2.3 + - + -
813D LYS* 3.9 2.4 - - - -
814D ILE* 3.1 36.4 + - + +
816D VAL* 3.4 35.7 - - + -
825D VAL* 4.0 22.2 - - + -
849D TYR* 5.0 3.6 - - + +
852D GLY* 3.9 22.4 - - - +
853D LYS 3.7 12.3 - - - +
854D LEU 4.3 3.6 - - - +
855D LEU* 4.4 7.9 - - + +
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Residues in contact with VAL 803 (chain D).
Click here for Legend to table.
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Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
801D LEU* 5.2 4.0 - - + -
802D VAL* 1.3 76.9 - - - +
804D VAL* 1.3 63.2 + - - +
805D GLN* 4.0 11.6 + - + -
810D VAL* 3.9 29.4 - - + -
812D ALA 4.5 2.7 - - - +
813D LYS* 5.0 6.5 - - + -
853D LYS 3.2 17.2 + - - +
854D LEU* 3.6 9.3 - - + +