Contacts of the helix formed by residues 914 - 988 (chain F) in PDB entry 6LXT
Residue contacts within the protein are
derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332). A
short description of the analytical approach
is given at the end of the page.
Note:
Non-standard 3 letter residue
codes indicate a heterogroup. To identify
and analyse, use LPC software
Legend:
Dist - nearest distance (Å) between atoms of two residues
Surf - contact surface area (Å2) between two residues
HB - hydrophilic-hydrophilic contact (hydrogen bond)
Arom - aromatic-aromatic contact
Phob - hydrophobic-hydrophobic contact
DC - hydrophobic-hydrophilic contact (destabilizing contact)
+/- - indicates presence/absence of a specific contacts
* - indicates residues forming contacts by their side chain
(including CA atoms)
Residues in contact with ASN 914 (chain F).
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
913F GLN* 1.3 76.3 - - - +
915F VAL* 1.3 58.4 + - + +
916F LEU 3.2 0.2 - - - -
917F TYR* 3.3 22.3 + - + +
918F GLU* 2.9 39.9 + - + +
----------------------------------------------------------
Back to top of page
Residues in contact with VAL 915 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
1201E GLN* 3.2 60.3 - - + +
1202E GLU* 4.1 12.6 - - + -
913F GLN 4.1 15.3 - - - +
914F ASN* 1.3 76.8 - - - +
916F LEU* 1.3 53.3 + - + +
918F GLU* 3.7 6.9 - - - +
919F ASN* 2.8 46.9 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with LEU 916 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
913D GLN* 5.5 2.2 - - - +
916D LEU* 3.5 35.4 - - + -
920D GLN* 5.2 0.4 - - - +
916E LEU* 3.6 34.8 - - + -
917E TYR* 4.0 13.7 - - + +
920E GLN* 3.4 32.0 + - + -
913F GLN* 3.3 19.3 + - + +
914F ASN 3.2 0.4 - - - -
915F VAL* 1.3 76.7 - - + +
917F TYR* 1.3 59.7 + - - +
919F ASN* 3.3 5.6 + - - +
920F GLN* 3.0 35.6 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with TYR 917 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
912D THR* 2.9 44.6 + - + +
915D VAL* 5.1 14.4 - - + +
916D LEU* 4.1 25.8 - - + +
919D ASN* 5.6 5.8 - - - -
913F GLN 4.5 4.9 - - - -
914F ASN* 3.3 29.9 + - + +
916F LEU* 1.3 77.4 - - - +
918F GLU* 1.3 58.3 + - + +
920F GLN* 3.0 9.4 + - + +
921F LYS* 3.0 51.7 + - - +
1202F GLU* 5.7 6.3 - - + -
----------------------------------------------------------
Back to top of page
Residues in contact with GLU 918 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
1201E GLN* 5.6 8.1 - - + +
914F ASN* 2.9 29.2 + - + +
915F VAL* 3.7 7.9 - - - +
917F TYR* 1.3 76.6 - - + +
919F ASN* 1.3 62.3 + - - +
921F LYS* 4.1 15.2 - - - +
922F LEU* 3.4 21.3 + - - +
1302F ZN 2.7 33.1 - - - -
----------------------------------------------------------
Back to top of page
Residues in contact with ASN 919 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
917E TYR* 5.9 2.8 - - - +
920E GLN* 3.1 32.1 - - - +
1200E LEU* 3.3 33.1 - - + +
1201E GLN* 3.4 34.8 + - - +
915F VAL* 2.8 30.6 + - - +
916F LEU* 3.5 4.2 - - - +
918F GLU* 1.3 75.4 - - - +
920F GLN* 1.3 57.7 + - - +
922F LEU* 3.2 8.8 + - - +
923F ILE* 2.9 32.4 + - + +
----------------------------------------------------------
Back to top of page
Residues in contact with GLN 920 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
916D LEU* 2.9 39.9 + - + +
919D ASN* 2.8 36.2 + - + +
920D GLN* 3.1 27.3 - - - +
923D ILE* 4.3 12.7 - - + +
920E GLN* 3.2 15.9 + - - +
916F LEU* 3.0 20.1 + - - +
917F TYR* 3.0 10.0 + - + +
919F ASN* 1.3 71.8 - - - +
921F LYS* 1.3 67.3 + - - +
923F ILE* 3.2 9.1 + - - +
924F ALA* 3.0 24.6 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with LYS 921 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
917F TYR* 3.0 38.3 + - - +
918F GLU* 4.1 25.7 + - - +
920F GLN* 1.3 74.8 - - - +
922F LEU* 1.3 63.8 + - - +
924F ALA* 3.4 6.5 + - - +
925F ASN* 3.0 38.0 + - - +
1200F LEU* 4.2 9.4 - - + +
1202F GLU* 6.4 1.8 - - - +
1302F ZN 4.5 6.9 - - - -
----------------------------------------------------------
Back to top of page
Residues in contact with LEU 922 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
1198E ILE* 4.0 14.1 - - + -
1199E ASP 3.1 35.4 - - - +
1200E LEU* 4.4 6.7 - - + -
918F GLU 3.4 13.0 + - - +
919F ASN* 3.2 11.3 + - - +
921F LYS* 1.3 76.6 - - - +
923F ILE* 1.3 64.1 + - - +
925F ASN* 3.0 10.0 + - + +
926F GLN* 2.9 58.0 + - + +
----------------------------------------------------------
Back to top of page
Residues in contact with ILE 923 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
923D ILE* 3.7 34.3 - - + -
920E GLN* 3.8 44.2 - - + +
923E ILE* 3.9 18.2 - - + -
924E ALA* 5.1 0.2 - - + -
927E PHE* 6.1 1.1 - - + -
1198E ILE* 3.9 35.4 - - + +
1200E LEU* 4.8 3.1 - - + -
919F ASN* 2.9 23.8 + - + +
920F GLN* 3.5 9.2 - - - +
922F LEU* 1.3 71.9 - - - +
924F ALA* 1.3 52.9 + - - +
926F GLN* 3.4 2.4 + - - +
927F PHE* 2.8 39.3 + - + +
----------------------------------------------------------
Back to top of page
Residues in contact with ALA 924 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
923D ILE* 5.1 3.6 - - + -
920F GLN 3.0 12.6 + - - +
921F LYS* 3.5 4.5 - - - +
923F ILE* 1.3 75.1 - - - +
925F ASN* 1.3 53.6 - - - +
927F PHE* 3.4 2.3 + - - +
928F ASN* 2.8 40.7 + - - +
1198F ILE* 4.0 33.4 - - + -
1200F LEU* 3.5 26.7 - - + -
----------------------------------------------------------
Back to top of page
Residues in contact with ASN 925 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
921F LYS* 3.0 31.3 + - - +
922F LEU* 3.6 8.1 - - + +
924F ALA* 1.3 71.7 - - - +
926F GLN* 1.3 62.1 + - - +
928F ASN* 3.3 5.7 + - - +
929F SER* 2.8 35.1 + - - -
1200F LEU* 3.4 25.5 - - - +
----------------------------------------------------------
Back to top of page
Residues in contact with GLN 926 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
927E PHE* 3.5 5.0 - - + -
1195E GLU 3.6 7.3 - - - +
1196E SER* 3.3 28.9 + - - +
1197E LEU 3.3 23.6 - - - +
1198E ILE* 3.8 17.9 - - + -
922F LEU* 2.9 43.8 + - + +
923F ILE 3.6 6.3 - - - +
925F ASN* 1.3 78.3 - - - +
927F PHE* 1.3 58.4 + - - +
929F SER* 3.3 7.2 - - - -
930F ALA* 2.9 29.5 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with PHE 927 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
923D ILE* 5.6 2.7 - - + -
926D GLN* 3.6 30.3 - - + -
927D PHE* 3.7 28.3 - + + -
930D ALA* 3.7 7.0 - - + -
927E PHE* 3.6 30.0 - + + -
923F ILE* 2.8 26.4 + - + +
924F ALA* 3.5 4.9 - - - +
926F GLN* 1.3 69.6 - - - +
928F ASN* 1.3 62.9 + - - +
930F ALA* 3.2 3.6 + - - +
931F ILE* 3.0 58.3 + - + +
1196F SER 3.2 22.2 - - - -
1198F ILE* 3.6 23.6 - - + -
----------------------------------------------------------
Back to top of page
Residues in contact with ASN 928 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
924F ALA 2.8 18.8 + - - +
925F ASN* 3.8 5.6 - - - +
927F PHE* 1.3 72.8 - - - +
929F SER* 1.3 64.0 + - - +
932F GLY* 3.1 20.3 + - - -
1197F LEU* 3.1 31.7 - - + +
1198F ILE* 3.1 32.7 + - - +
1200F LEU* 2.8 36.3 - - + +
----------------------------------------------------------
Back to top of page
Residues in contact with SER 929 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
1195E GLU 4.9 1.6 + - - -
1196E SER* 2.4 23.8 + - - -
925F ASN 2.8 19.0 + - - -
926F GLN* 3.3 12.6 - - - -
928F ASN* 1.3 74.0 - - - +
930F ALA* 1.3 60.7 + - - -
932F GLY* 3.1 13.2 + - - -
933F LYS* 3.1 27.3 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with ALA 930 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
927E PHE* 3.6 20.9 - - + -
931E ILE* 3.9 16.4 - - + -
1193E LEU* 3.9 11.2 - - + +
1196E SER* 3.7 8.5 - - - +
926F GLN 2.9 19.6 + - - +
927F PHE 3.2 4.9 + - - +
929F SER* 1.3 72.7 + - - +
931F ILE* 1.3 58.0 + - + +
933F LYS* 3.3 4.2 + - - +
934F ILE* 2.9 38.6 + - + +
----------------------------------------------------------
Back to top of page
Residues in contact with ILE 931 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
930D ALA* 4.1 8.1 - - + -
934D ILE* 5.9 2.2 - - + -
927F PHE* 3.0 63.6 + - + +
930F ALA* 1.3 72.9 - - + +
932F GLY* 1.3 57.5 + - - +
934F ILE* 3.0 12.0 + - + +
935F GLN* 2.8 39.6 + - - +
1193F LEU* 3.9 32.1 - - + +
1196F SER* 3.9 19.7 - - - +
1197F LEU* 3.8 23.1 - - + -
----------------------------------------------------------
Back to top of page
Residues in contact with GLY 932 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
1191B LYS* 3.6 17.6 + - - -
928F ASN 3.1 11.6 + - - -
929F SER* 3.1 9.1 + - - -
931F ILE* 1.3 77.6 - - - +
933F LYS* 1.3 60.7 + - - +
935F GLN* 3.2 18.4 + - - +
936F ASP* 3.2 16.2 + - - +
1197F LEU* 5.8 0.9 - - - -
----------------------------------------------------------
Back to top of page
Residues in contact with LYS 933 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
1189E VAL* 3.7 23.1 - - + +
1192E ASN* 2.6 41.7 + - + +
1193E LEU* 3.6 22.2 - - + -
1195E GLU* 4.0 6.9 + - - +
1196E SER* 3.1 28.5 + - - +
929F SER* 3.1 18.3 + - - +
930F ALA 3.5 6.3 - - - +
932F GLY* 1.3 73.1 - - - +
934F ILE* 1.3 57.4 + - - +
936F ASP* 3.2 11.8 + - - +
937F SER* 2.9 26.5 + - - -
----------------------------------------------------------
Back to top of page
Residues in contact with ILE 934 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
934D ILE* 4.1 22.9 - - + -
931E ILE* 5.8 2.7 - - + -
934E ILE* 4.1 40.6 - - + -
938E LEU* 5.2 1.1 - - + -
1189E VAL* 5.2 0.2 - - - -
1193E LEU* 4.5 11.9 - - + -
930F ALA* 2.9 33.1 + - + +
931F ILE* 3.0 8.7 + - + +
933F LYS* 1.3 71.7 - - - +
935F GLN* 1.3 55.9 + - - +
937F SER* 2.5 26.8 + - - +
938F LEU* 2.8 32.6 + - + +
1193F LEU* 4.1 19.5 - - + -
----------------------------------------------------------
Back to top of page
Residues in contact with GLN 935 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
1191B LYS* 4.0 19.4 - - - +
931F ILE* 2.8 25.8 + - - +
932F GLY* 3.2 20.8 + - - +
934F ILE* 1.3 68.8 - - - +
936F ASP* 1.3 65.0 + - - +
938F LEU* 3.3 8.7 + - - +
939F SER* 3.0 25.1 + - - -
1190F ALA* 3.2 33.4 - - + +
1193F LEU* 3.6 14.7 - - + -
1194F ASN* 3.0 41.0 + - - +
1197F LEU* 5.4 4.2 - - - +
----------------------------------------------------------
Back to top of page
Residues in contact with ASP 936 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
1191B LYS* 2.6 41.2 + - - +
1185E ARG* 4.2 24.7 + - - -
1189E VAL* 5.1 7.9 - - + -
932F GLY 3.2 6.7 + - - +
933F LYS* 3.5 11.5 - - - +
935F GLN* 1.3 76.9 - - - +
937F SER* 1.3 54.2 + - - +
939F SER* 3.3 8.6 + - - -
940F SER* 2.9 36.7 + - - -
----------------------------------------------------------
Back to top of page
Residues in contact with SER 937 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
938E LEU* 3.5 36.9 - - - +
1185E ARG* 5.6 0.4 - - - -
1186E LEU* 3.4 15.5 - - - +
1189E VAL* 4.2 11.6 - - - +
933F LYS 2.9 13.2 + - - -
934F ILE* 2.5 27.4 + - - +
936F ASP* 1.3 74.5 - - - +
938F LEU* 1.3 56.8 + - - +
940F SER* 3.4 2.3 + - - -
941F THR* 2.8 36.9 + - - -
----------------------------------------------------------
Back to top of page
Residues in contact with LEU 938 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
934D ILE* 5.6 2.9 - - + -
937D SER* 3.4 35.2 - - - +
938D LEU* 5.3 8.5 - - + -
941D THR* 5.4 2.0 - - - +
938E LEU* 5.9 3.4 - - + -
934F ILE* 2.8 31.1 + - + +
935F GLN 3.7 4.0 - - - +
937F SER* 1.3 77.5 + - - +
939F SER* 1.3 62.6 + - - +
941F THR* 3.3 9.4 + - - +
942F ALA* 3.0 24.2 + - - +
1186F LEU* 4.2 18.3 - - + +
1189F VAL* 4.0 10.8 - - + -
1190F ALA* 4.1 18.6 - - + +
1193F LEU* 3.9 28.0 - - + -
----------------------------------------------------------
Back to top of page
Residues in contact with SER 939 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
935F GLN 3.0 17.7 + - - -
936F ASP* 3.5 9.4 - - - -
937F SER 3.3 0.2 - - - -
938F LEU* 1.3 75.9 - - - +
940F SER* 1.3 56.1 + - - +
942F ALA* 3.4 4.7 + - - +
943F SER* 3.0 28.2 + - - -
1187F ASN* 4.3 16.6 + - - +
1190F ALA* 4.6 7.1 - - - +
----------------------------------------------------------
Back to top of page
Residues in contact with SER 940 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
1182E GLU* 3.2 35.7 - - - +
1185E ARG* 3.4 35.5 + - - +
1186E LEU* 4.4 6.1 - - - -
936F ASP 2.9 17.3 + - - -
937F SER 3.7 5.2 - - - -
939F SER* 1.3 71.8 - - - +
941F THR* 1.3 65.8 + - - +
943F SER* 3.2 6.7 - - - -
944F ALA* 3.0 19.4 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with THR 941 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
941D THR* 3.8 26.7 - - + +
938E LEU* 5.3 3.3 - - - +
941E THR* 4.0 12.4 - - + +
945E LEU* 4.8 6.3 - - + -
1186E LEU* 3.6 16.7 - - - +
937F SER 2.8 20.6 + - - -
938F LEU* 3.3 13.1 + - + +
940F SER* 1.3 74.1 - - - +
942F ALA* 1.3 52.3 + - - +
944F ALA* 3.2 8.0 + - - +
945F LEU* 2.9 40.8 + - + +
1186F LEU* 3.7 18.4 - - + -
----------------------------------------------------------
Back to top of page
Residues in contact with ALA 942 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
938F LEU 3.0 12.5 + - - +
939F SER 3.5 6.3 - - - +
941F THR* 1.3 72.3 - - - +
943F SER* 1.3 59.3 + - - +
945F LEU* 3.9 3.0 - - - +
946F GLY* 3.0 23.7 + - - -
1183F ILE* 3.6 21.1 - - + +
1186F LEU* 3.8 21.5 - - + +
1187F ASN* 3.5 33.7 - - - +
----------------------------------------------------------
Back to top of page
Residues in contact with SER 943 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
1182E GLU* 2.9 28.9 + - - +
939F SER* 3.0 15.0 + - - -
940F SER* 3.2 10.8 - - - -
942F ALA* 1.3 73.3 - - - +
944F ALA* 1.3 55.2 + - - +
946F GLY* 2.9 21.5 + - - -
947F LYS* 2.9 19.5 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with ALA 944 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
945E LEU* 3.8 26.2 - - + -
1179E ILE* 3.8 29.7 - - + +
1182E GLU* 4.0 13.0 - - + +
1183E ILE 5.7 0.2 - - - +
940F SER 3.0 10.0 + - - +
941F THR 3.5 7.6 - - - +
943F SER* 1.3 77.2 - - - +
945F LEU* 1.3 56.7 + - - +
947F LYS 3.4 0.7 + - - -
948F LEU* 3.0 35.7 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with LEU 945 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
940D SER 5.6 0.2 - - - +
941D THR* 4.8 7.6 - - + -
944D ALA* 3.9 27.6 - - + -
945D LEU* 4.2 9.2 - - + -
948D LEU* 3.4 27.4 - - + -
945E LEU* 4.1 18.4 - - + -
941F THR* 2.9 27.3 + - + +
942F ALA* 4.0 1.3 - - - +
944F ALA* 1.3 72.8 - - - +
946F GLY* 1.3 61.2 + - - +
948F LEU* 4.0 3.7 - - - +
949F GLN* 2.9 30.0 + - - +
1179F ILE* 3.6 12.7 - - + +
1182F GLU* 5.9 0.4 - - + -
1183F ILE* 3.8 14.1 - - + +
1186F LEU* 3.8 25.4 - - + -
----------------------------------------------------------
Back to top of page
Residues in contact with GLY 946 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
942F ALA 3.0 10.9 + - - -
943F SER 2.9 9.0 + - - -
945F LEU* 1.3 76.5 - - - +
947F LYS* 1.3 50.2 - - - -
949F GLN* 3.0 5.3 + - - +
950F ASP* 2.9 42.4 + - - +
1183F ILE* 3.6 17.6 - - - +
----------------------------------------------------------
Back to top of page
Residues in contact with LYS 947 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
1180B GLN* 6.1 4.4 - - - +
1177E VAL* 3.6 10.1 - - + -
1178E ASN 3.2 23.8 + - - +
1179E ILE* 3.4 22.0 - - + -
1181E LYS* 5.8 2.2 - - - +
1182E GLU* 2.7 34.8 + - - +
943F SER* 2.9 14.5 + - - +
946F GLY* 1.3 72.6 - - - +
948F LEU* 1.3 63.6 + - - +
950F ASP* 3.3 9.8 + - - +
951F VAL* 3.0 29.2 + - + +
----------------------------------------------------------
Back to top of page
Residues in contact with LEU 948 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
948D LEU* 4.0 17.0 - - + -
945E LEU* 3.8 26.0 - - + -
948E LEU* 4.0 24.5 - - + -
949E GLN* 4.3 12.6 - - - +
952E VAL* 4.3 20.9 - - + -
1177E VAL* 3.9 26.9 - - + -
1179E ILE* 3.9 13.5 - - + -
944F ALA 3.0 21.9 + - - +
945F LEU 4.0 3.4 - - - +
947F LYS* 1.3 75.2 - - - +
949F GLN* 1.3 52.8 + - - +
951F VAL* 4.9 0.9 - - - -
952F VAL* 2.8 41.4 + - + +
----------------------------------------------------------
Back to top of page
Residues in contact with GLN 949 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
948D LEU* 4.4 2.6 - - - +
945F LEU 2.9 20.0 + - - +
946F GLY* 3.4 4.2 - - - +
948F LEU* 1.3 75.2 - - - +
950F ASP* 1.3 71.1 + - - +
952F VAL* 4.0 0.7 - - - +
953F ASN* 3.1 40.0 + - - +
1177F VAL* 3.4 16.4 + - + +
1178F ASN* 3.3 17.4 + - - +
1179F ILE* 2.9 41.1 - - + +
1180F GLN* 3.6 20.3 + - - +
1183F ILE* 3.4 21.1 - - - +
----------------------------------------------------------
Back to top of page
Residues in contact with ASP 950 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
946F GLY 2.9 20.8 + - - +
947F LYS* 3.7 10.2 - - - +
949F GLN* 1.3 77.4 - - - +
951F VAL* 1.3 58.7 + - + +
953F ASN* 3.3 5.7 + - - +
954F GLN* 3.0 32.2 + - + +
1301F ZN 2.3 34.8 - - - -
----------------------------------------------------------
Back to top of page
Residues in contact with VAL 951 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
952E VAL* 3.8 22.0 - - + -
1175E SER* 3.7 28.3 - - - +
1176E VAL 3.5 27.8 - - - +
1177E VAL* 3.5 16.4 - - + -
947F LYS* 3.0 20.4 + - + +
948F LEU 4.1 1.8 - - - +
950F ASP* 1.3 73.3 - - + +
952F VAL* 1.3 67.0 + - - +
954F GLN* 3.3 7.6 + - + +
955F ASN* 3.0 25.8 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with VAL 952 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
948D LEU* 4.3 9.0 - - + -
951D VAL* 3.9 28.5 - - + -
952D VAL* 4.0 17.5 - - + +
955D ASN* 4.2 8.8 + - - +
952E VAL* 4.0 28.0 - - + -
948F LEU* 2.8 33.0 + - + +
949F GLN 4.0 3.1 - - - +
951F VAL* 1.3 72.5 - - - +
953F ASN* 1.3 58.3 + - - +
955F ASN* 3.5 7.1 + - - +
956F ALA* 2.9 26.4 + - + +
1177F VAL* 4.2 12.1 - - + -
----------------------------------------------------------
Back to top of page
Residues in contact with ASN 953 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
949F GLN* 3.1 30.8 + - - +
950F ASP* 3.6 5.5 - - - +
952F VAL* 1.3 74.4 - - - +
954F GLN* 1.3 56.2 + - - +
956F ALA* 3.3 6.6 + - - +
957F GLN* 2.9 33.6 + - - +
1176F VAL* 3.3 18.0 - - + +
1177F VAL* 2.9 47.3 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with GLN 954 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
1173E ASN 5.2 1.4 - - - +
1175E SER* 3.4 24.2 + - - +
950F ASP* 3.0 22.0 + - + +
951F VAL* 3.3 6.9 + - - +
953F ASN* 1.3 73.7 - - - +
955F ASN* 1.3 53.4 + - - +
957F GLN* 3.3 7.9 + - - +
958F ALA* 2.9 33.2 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with ASN 955 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
955D ASN* 5.2 0.9 - - - +
952E VAL* 4.1 11.3 + - - +
955E ASN* 5.8 1.0 - - - +
956E ALA* 3.4 20.0 - - - +
959E LEU* 4.0 6.9 - - + +
1174E ALA* 3.5 10.8 - - + -
1175E SER* 2.9 43.7 + - - +
951F VAL* 3.0 27.8 + - - +
952F VAL* 3.7 6.5 - - - +
954F GLN* 1.3 71.9 - - - +
956F ALA* 1.3 65.1 + - - +
958F ALA* 3.6 6.8 + - - +
959F LEU* 3.1 23.7 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with ALA 956 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
955D ASN* 3.4 24.4 - - - +
952F VAL* 2.9 13.8 + - + +
953F ASN* 3.3 10.7 + - - +
955F ASN* 1.3 75.2 - - - +
957F GLN* 1.3 57.1 + - - +
959F LEU* 3.4 1.1 + - - -
960F ASN* 2.9 34.2 + - - -
1174F ALA* 3.5 16.3 - - + +
1175F SER 3.5 14.6 - - - +
1176F VAL* 4.2 10.1 - - + -
----------------------------------------------------------
Back to top of page
Residues in contact with GLN 957 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
953F ASN 2.9 16.5 + - - +
954F GLN* 3.3 6.9 + - - +
956F ALA* 1.3 72.6 - - - +
958F ALA* 1.3 55.6 + - - +
960F ASN* 3.1 20.2 + - - +
961F THR* 2.8 53.3 + - + +
964F LYS* 4.9 7.4 + - - -
1176F VAL* 5.3 9.1 - - - +
----------------------------------------------------------
Back to top of page
Residues in contact with ALA 958 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
959E LEU* 4.4 7.9 - - + -
1172E ILE* 3.6 15.9 - - + +
1173E ASN 3.7 26.0 - - - +
1174E ALA 4.5 0.2 - - - +
954F GLN 2.9 17.0 + - - +
955F ASN* 3.7 9.6 - - - +
957F GLN* 1.3 74.4 - - - +
959F LEU* 1.3 56.6 + - - +
961F THR* 2.7 23.5 + - - -
962F LEU* 2.9 17.7 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with LEU 959 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
955D ASN* 3.9 24.0 - - + +
958D ALA* 4.4 6.1 - - + -
959D LEU* 4.2 20.2 - - + +
962D LEU* 3.6 29.2 - - + -
959E LEU* 4.2 19.0 - - + +
955F ASN 3.1 18.8 + - - +
956F ALA 3.6 4.7 - - - +
957F GLN 3.2 0.2 - - - -
958F ALA* 1.3 76.0 - - - +
960F ASN* 1.3 57.4 + - - +
962F LEU* 3.4 12.4 - - + +
963F VAL* 2.9 33.0 + - + +
1172F ILE* 5.3 2.5 - - + -
1174F ALA* 4.0 20.4 - - + +
----------------------------------------------------------
Back to top of page
Residues in contact with ASN 960 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
956F ALA* 2.9 24.3 + - - +
957F GLN* 3.1 24.2 + - - +
959F LEU* 1.3 73.2 - - - +
961F THR* 1.3 64.3 + - - +
963F VAL* 3.3 7.5 + - - +
964F LYS* 3.2 37.2 + - - +
1172F ILE 4.8 0.2 - - - +
1173F ASN* 2.9 21.9 - - - +
1174F ALA 2.8 45.9 + - - +
1176F VAL* 5.5 2.8 - - - +
----------------------------------------------------------
Back to top of page
Residues in contact with THR 961 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
1172E ILE* 3.3 19.2 - - - +
957F GLN* 2.8 40.2 + - + +
958F ALA* 2.7 22.5 + - - -
960F ASN* 1.3 67.7 - - - +
962F LEU* 1.3 64.1 + - - +
964F LYS* 3.2 13.1 + - + +
965F GLN* 3.0 35.6 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with LEU 962 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
962D LEU* 4.3 9.4 - - + -
959E LEU* 3.5 32.1 - - + -
962E LEU* 4.4 7.6 - - + -
963E VAL* 4.0 19.1 - - + -
966E LEU* 4.1 9.2 - - + -
1169E ILE* 4.5 15.9 - - + -
1172E ILE* 4.0 14.6 - - + +
958F ALA 2.9 17.5 + - - +
959F LEU* 3.4 13.9 - - + +
961F THR* 1.3 77.5 + - - +
963F VAL* 1.3 52.2 + - - +
965F GLN* 3.3 1.7 + - - +
966F LEU* 2.8 65.7 + - + +
----------------------------------------------------------
Back to top of page
Residues in contact with VAL 963 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
962D LEU* 4.1 18.8 - - + -
959F LEU* 2.9 28.1 + - + +
960F ASN* 3.6 9.2 - - - +
961F THR 3.3 0.2 - - - -
962F LEU* 1.3 71.5 - - - +
964F LYS* 1.3 60.8 + - + +
966F LEU* 3.2 9.6 + - - +
967F SER* 2.9 26.0 + - - -
1169F ILE* 3.4 24.7 - - + +
1170F SER* 4.0 11.7 - - - +
1172F ILE* 3.5 45.5 - - + +
1173F ASN* 5.0 2.5 - - - +
----------------------------------------------------------
Back to top of page
Residues in contact with LYS 964 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
957F GLN* 4.9 10.3 + - - -
960F ASN* 3.2 23.6 + - - +
961F THR* 3.2 11.5 + - - +
963F VAL* 1.3 79.7 - - + +
965F GLN* 1.3 59.5 + - + +
967F SER* 3.2 8.9 + - - -
968F SER* 3.0 27.9 + - - -
1170F SER* 6.5 0.4 - - - -
1173F ASN* 5.4 5.8 - - - +
----------------------------------------------------------
Back to top of page
Residues in contact with GLN 965 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
1168E ASP 2.7 27.9 - - - +
1169E ILE* 3.5 16.0 - - + +
1172E ILE* 3.5 22.7 - - - +
961F THR* 3.0 24.6 + - - +
962F LEU 3.9 1.1 - - - +
964F LYS* 1.3 76.4 - - + +
966F LEU* 1.3 59.3 + - - +
968F SER* 3.5 8.0 + - - -
969F ASN* 3.1 35.9 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with LEU 966 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
962D LEU* 4.0 15.9 - - + -
966D LEU* 3.9 27.4 - - + -
966E LEU* 3.9 15.9 - - + -
970E PHE* 3.4 34.8 - - + -
1169E ILE* 5.1 3.4 - - + -
962F LEU* 2.8 54.5 + - + +
963F VAL* 3.3 6.1 - - - +
965F GLN* 1.3 69.8 - - - +
967F SER* 1.3 59.2 + - - +
969F ASN* 3.2 5.8 + - - +
970F PHE* 2.9 42.6 + - + -
1169F ILE* 4.0 7.2 - - + -
----------------------------------------------------------
Back to top of page
Residues in contact with SER 967 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
963F VAL 2.9 13.1 + - - -
964F LYS* 3.2 11.0 + - - -
966F LEU* 1.3 74.9 - - - +
968F SER* 1.3 55.9 + - - +
970F PHE* 3.5 5.1 + - - +
971F GLY* 2.9 27.9 + - - -
1168F ASP* 3.9 6.4 + - - -
1169F ILE* 3.7 14.2 - - - +
1170F SER* 3.7 27.9 + - - -
----------------------------------------------------------
Back to top of page
Residues in contact with SER 968 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
1166E LEU 5.9 0.4 - - - -
964F LYS 3.0 13.0 + - - -
965F GLN* 3.6 12.8 - - - -
966F LEU 3.3 0.2 - - - -
967F SER* 1.3 76.5 - - - +
969F ASN* 1.3 58.5 + - - +
971F GLY* 3.7 1.5 + - - -
972F ALA* 3.1 28.2 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with ASN 969 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
970E PHE* 3.4 43.6 - - + -
1166E LEU* 3.2 45.6 - - + +
1167E GLY* 3.7 20.0 + - - -
1169E ILE* 4.5 8.7 - - - +
965F GLN* 3.1 16.8 + - - +
966F LEU 3.2 7.2 + - - +
968F SER* 1.3 77.4 - - - +
970F PHE* 1.3 59.4 + - - +
972F ALA* 3.3 1.7 + - - -
973F ILE* 2.9 26.7 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with PHE 970 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
966D LEU* 3.2 35.4 - - + -
969D ASN* 3.7 33.4 - - + +
970D PHE* 4.3 11.2 - + - -
973D ILE* 4.0 16.2 - - + -
970E PHE* 4.0 23.3 - + - -
966F LEU* 2.9 35.2 + - + +
967F SER* 4.0 4.9 - - - +
969F ASN* 1.3 71.0 - - - +
971F GLY* 1.3 67.9 + - - +
973F ILE* 3.0 9.1 + - + +
974F SER* 2.8 27.1 + - - -
1166F LEU* 3.8 23.6 - - + +
1167F GLY 5.3 2.2 - - - +
1169F ILE* 4.5 11.0 - - + -
----------------------------------------------------------
Back to top of page
Residues in contact with GLY 971 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
967F SER 2.9 17.8 + - - -
968F SER* 3.9 1.6 - - - -
970F PHE* 1.3 76.0 - - - +
972F ALA* 1.3 56.1 + - - +
974F SER* 3.2 7.8 + - - -
975F SER* 2.7 33.5 + - - -
----------------------------------------------------------
Back to top of page
Residues in contact with ALA 972 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
1164E VAL* 5.5 3.1 - - + -
1166E LEU* 3.9 18.6 - - + +
968F SER 3.1 15.1 + - - +
969F ASN* 3.4 8.7 - - - +
971F GLY* 1.3 72.4 - - - +
973F ILE* 1.3 62.7 + - - +
975F SER* 3.3 9.6 + - - -
976F VAL* 3.1 29.9 + - + +
----------------------------------------------------------
Back to top of page
Residues in contact with ILE 973 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
973D ILE* 4.2 17.3 - - + -
970E PHE* 3.8 34.1 - - + -
973E ILE* 4.3 27.4 - - + -
977E LEU* 4.7 6.0 - - + +
1164E VAL* 5.7 0.2 - - - -
1166E LEU* 3.5 20.4 - - + -
969F ASN 2.9 24.1 + - - +
970F PHE* 3.0 15.0 + - + +
972F ALA* 1.3 70.3 - - - +
974F SER* 1.3 60.8 + - - +
976F VAL* 3.1 9.6 + - - +
977F LEU* 2.9 48.6 + - + +
1166F LEU* 4.6 2.0 - - + -
----------------------------------------------------------
Back to top of page
Residues in contact with SER 974 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
970F PHE 2.8 17.1 + - - -
971F GLY* 3.2 11.1 + - - -
973F ILE* 1.3 73.3 - - - +
975F SER* 1.3 65.8 + - - +
977F LEU* 3.3 8.9 + - - +
978F ASN* 2.9 39.1 + - - -
1166F LEU* 3.8 22.9 - - - +
----------------------------------------------------------
Back to top of page
Residues in contact with SER 975 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
971F GLY 2.7 21.6 + - - -
972F ALA* 3.3 10.8 + - - -
973F ILE 3.2 0.2 - - - -
974F SER* 1.3 81.9 + - - +
976F VAL* 1.3 65.6 + - - +
978F ASN* 3.0 15.5 + - - +
979F ASP* 3.0 13.7 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with VAL 976 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
977E LEU* 3.9 15.0 - - + -
981E LEU* 4.5 5.4 - - + -
1164E VAL* 3.3 45.3 - - + -
972F ALA* 3.3 15.3 - - + +
973F ILE 3.1 7.9 + - - +
975F SER* 1.3 73.9 - - - +
977F LEU* 1.3 57.6 + - - +
979F ASP* 3.1 12.5 + - + +
980F ILE* 2.9 48.5 + - + +
----------------------------------------------------------
Back to top of page
Residues in contact with LEU 977 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
973D ILE* 4.6 17.7 - - + -
976D VAL* 4.2 24.0 - - + -
977D LEU* 4.3 11.2 - - + -
980D ILE* 4.1 22.2 - - + +
977E LEU* 3.8 24.0 - - + -
973F ILE* 2.9 39.6 + - + +
974F SER* 3.6 8.5 - - - +
976F VAL* 1.3 76.5 - - - +
978F ASN* 1.3 59.1 + - - +
980F ILE* 3.2 6.4 + - + +
981F LEU* 2.9 35.7 + - + +
1166F LEU* 5.6 3.6 - - + -
----------------------------------------------------------
Back to top of page
Residues in contact with ASN 978 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
974F SER* 2.9 34.3 + - - -
975F SER* 3.6 8.4 - - - +
977F LEU* 1.3 73.9 - - - +
979F ASP* 1.3 63.8 + - - +
981F LEU* 3.4 16.9 + - - +
982F SER* 3.1 26.5 + - - -
----------------------------------------------------------
Back to top of page
Residues in contact with ASP 979 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
981E LEU* 5.1 4.2 - - - +
975F SER 3.0 11.5 + - - +
976F VAL* 3.3 13.9 - - - +
978F ASN* 1.3 74.5 - - - +
980F ILE* 1.3 52.0 + - - +
982F SER* 3.0 11.9 + - - -
983F ARG* 2.9 72.4 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with ILE 980 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
980D ILE* 3.7 28.3 - - + -
977E LEU* 3.6 32.3 - - + +
980E ILE* 3.8 25.8 - - + -
981E LEU* 3.6 31.0 - - + -
984E LEU* 4.1 8.2 - - + +
976F VAL* 2.9 25.7 + - + +
977F LEU* 3.2 10.3 + - + +
979F ASP* 1.3 74.2 - - + +
981F LEU* 1.3 52.2 + - - +
983F ARG* 3.3 9.6 + - - +
984F LEU* 2.9 35.9 + - + +
----------------------------------------------------------
Back to top of page
Residues in contact with LEU 981 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
976D VAL* 4.5 15.0 - - + -
980D ILE* 4.0 18.4 - - + -
983D ARG* 4.0 28.3 - - - +
977F LEU* 2.9 22.6 + - + +
978F ASN* 3.6 19.5 - - - +
980F ILE* 1.3 72.7 - - - +
982F SER* 1.3 58.9 + - - +
984F LEU* 3.4 7.8 + - + +
985F ASP* 3.1 35.6 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with SER 982 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
978F ASN 3.1 13.5 + - - -
979F ASP* 3.0 13.5 + - - -
981F LEU* 1.3 73.4 - - - +
983F ARG* 1.3 63.8 + - - +
985F ASP* 3.4 9.9 + - - +
986F LYS* 3.2 40.2 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with ARG 983 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
981E LEU* 3.7 24.4 + - - +
984E LEU* 3.9 22.8 - - + +
985E ASP* 4.7 12.5 + - - -
988E GLU* 3.6 27.9 + - - +
979F ASP* 2.9 46.5 + - - +
980F ILE* 3.3 9.8 + - - +
982F SER* 1.3 75.2 - - - +
984F LEU* 1.3 57.0 + - - +
986F LYS* 3.3 8.8 + - - +
987F VAL* 3.0 33.5 + - - +
----------------------------------------------------------
Back to top of page
Residues in contact with LEU 984 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
980D ILE* 3.8 40.6 - - + -
983D ARG* 3.8 35.7 - - + +
984D LEU* 4.5 16.2 - - + +
984E LEU* 4.3 19.1 - - + -
980F ILE* 2.9 22.1 + - + +
981F LEU* 3.6 8.5 - - + +
982F SER 3.3 0.2 - - - -
983F ARG* 1.3 73.5 - - - +
985F ASP* 1.3 57.8 + - - +
987F VAL* 3.4 9.1 + - + +
988F GLU* 2.8 48.7 + - + +
----------------------------------------------------------
Back to top of page
Residues in contact with ASP 985 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
981F LEU 3.1 20.8 + - - +
982F SER* 3.6 11.8 - - - +
984F LEU* 1.3 78.1 - - - +
986F LYS* 1.3 62.6 + - + +
988F GLU* 3.2 29.2 - - - +
----------------------------------------------------------
Back to top of page
Residues in contact with LYS 986 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
988E GLU* 6.1 0.7 - - - +
982F SER* 3.2 28.2 + - - +
983F ARG* 3.3 7.6 + - - +
985F ASP* 1.3 76.3 - - + +
987F VAL* 1.3 64.6 + - + +
988F GLU 4.0 3.6 - - - +
----------------------------------------------------------
Back to top of page
Residues in contact with VAL 987 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
986D LYS* 6.5 0.2 - - + -
984E LEU* 4.3 13.7 - - + -
987E VAL* 3.6 27.6 - - + -
988E GLU* 4.0 28.3 - - + +
983F ARG 3.0 20.3 + - - +
984F LEU* 3.4 10.7 + - + +
985F ASP 3.3 0.2 - - - -
986F LYS* 1.3 77.5 - - + +
988F GLU* 1.3 65.1 + - + +
----------------------------------------------------------
Back to top of page
Residues in contact with GLU 988 (chain F).
Click here for Legend to table.
----------------------------------------------------------
Specific contacts
---------------------------
Residue Dist Surf HB Arom Phob DC
----------------------------------------------------------
983D ARG* 3.6 34.5 - - - +
984F LEU* 2.8 29.4 + - + +
985F ASP* 3.2 25.8 - - - +
986F LYS 4.0 4.0 - - - +
987F VAL* 1.3 81.9 - - + +
----------------------------------------------------------
Back to top of page
A short description of the
analytical approach
The contact analysis used in this page
is based upon the approach
developed in:
Sobolev V., Wade R.C., Vriend G.
and Edelman M. PROTEINS (1996)
25, 120-129.
Contact legitimacy depends on the hydrophobic-hydrophilic
properties of the contacting atoms. In order to
define it, for each inter-atomic contact,
eight atom classes have been introduced:
I Hydrophilic - N and O that can donate and accept hydrogen bonds
(e.g., oxygen of hydroxyl group of Ser. or Thr)
II Acceptor - N or O that can only accept a hydrogen bond
III Donor - N that can only donate a hydrogen bond
IV Hydrophobic - Cl, Br, I and all C atoms that are not in
aromatic rings and do not have a covalent bond to
a N or O atom
V Aromatic - C in aromatic rings irrespective of any other
bonds formed by the atom
VI Neutral - C atoms that have a covalent bond to at least one
atom of class I or two or more atoms from class II
or III; atoms; S, F, P, and metal atoms in all cases
VII Neutral-donor - C atoms that have a covalent bond with only one
atom of class III
VIII Neutral-acceptor - C atoms that have a covalent bond with only
one atom of class II
For each pair of contacts the state of legitimacy
is shown below:
Legend:
+, legitimate
-, illegitimate
------------------------------------------------------------
Atomic class I II III IV V VI VII VIII
------------------------------------------------------------
I (Hydrophilic) + + + - + + + +
II (Acceptor) + - + - + + + -
III (Donor) + + - - + + - +
IV (Hydrophobic) - - - + + + + +
V (Aromatic) + + + + + + + +
VI (Neutral) + + + + + + + +
VII (Neutral-donor) + + - + + + - +
VIII (Neutral-acceptor) + - + + + + + -
------------------------------------------------------------
Warning!
Atom classes for heterogroups are automatically
assigned based on the atomic coordinates. However, in
three cases (see below) the automatic assignment
is currently ambiguous. In these
cases, the user is advised to manually analyse
the full list of contacts using
LPC software.
1. Carbon atoms belonging to a 4-, 5- or 6-member ring are
considered "aromatic" (Class V) if the ring is approximately
planar, and "hydrophobic" (Class IV) or "neutral" (Classes
VI, VII, VIII) if the ring is non-planar.
2. The oxygen atom of a carbonyl or hydroxy group is considered
"hydroxy" (Class I) if the CO bond is longer than 1.29 Å, and
"carbonyl" (Class II) if shorter.
3. All nitrogen atoms are considered "hydrophilic" (Class I).
Please E-mail any
questions and/or suggestions concerning this page to
Vladimir.Sobolev@weizmann.ac.il