Analysis of interatomic Contacts of Structural Units in PDB entry:
1A5X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1A5X entry

There is 1 chain in PDB entry 1A5X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 54PHE 199
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 1A5X. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
69 71Right-handed 310
Helix 2
2
A
98 112Right-handed alpha
Helix 3
3
A
124 127Right-handed alpha
Helix 4
4
A
129 138Right-handed alpha
Helix 5
5
A
154 174Right-handed alpha
Helix 6
6
A
182 197Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1A5X.

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
88 93first strand
Strand 2
A
76 82anti-parallel
Strand 3
A
60 67anti-parallel
Strand 4
A
117 119parallel
Strand 5
A
141 143parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il