Analysis of interatomic Contacts of Structural Units in PDB entry:
1AM9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1AM9 entry

There are 8 chains in PDB entry 1AM9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
T 1 T 17
F
C 18 A 38
G
T 39 T 55
H
C 56 A 76
A
GLN 319LYS 398
B
SER 320SER 394
C
GLN 319LEU 400
D
GLN 319SER 394
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 1AM9. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
321 350Right-handed alpha
Helix 2
2
A
359 396Right-handed alpha
Helix 3
3
B
321 350Right-handed alpha
Helix 4
4
B
359 392Right-handed alpha
Helix 5
5
C
321 351Right-handed alpha
Helix 6
6
C
359 395Right-handed alpha
Helix 7
7
D
321 350Right-handed alpha
Helix 8
8
D
359 392Right-handed alpha
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There are no sheets in PDB entry 1AM9

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