Analysis of interatomic Contacts of Structural Units in PDB entry:
1B07


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1B07 entry

There are 2 chains in PDB entry 1B07 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 133HIS 191
C
GLU 2ARG 11
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 1B07. Click on helix number for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
184 186Right-handed 310
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There is 1 sheet ( A) in PDB entry 1B07.

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
187 189first strand
Strand 2
A
136 139anti-parallel
Strand 3
A
158 163anti-parallel
Strand 4
A
169 173anti-parallel
Strand 5
A
179 183anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il