Analysis of interatomic Contacts of Structural Units in PDB entry:
1B0K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1B0K entry

There is 1 chain in PDB entry 1B0K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 2LYS 754
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 1B0K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 32Right-handed alpha
Helix 2
2
A
38 46Right-handed alpha
Helix 3
3
A
73 86Right-handed alpha
Helix 4
4
A
109 119Right-handed alpha
Helix 5
5
A
121 134Right-handed alpha
Helix 6
6
A
146 153Right-handed alpha
Helix 7
7
A
166 174Right-handed 310
Helix 8
8
A
183 190Right-handed alpha
Helix 9
9
A
217 228Right-handed alpha
Helix 10
10
A
243 247Right-handed 310
Helix 11
11
A
250 263Right-handed alpha
Helix 12
12
A
274 283Right-handed alpha
Helix 13
13
A
286 293Right-handed alpha
Helix 14
14
A
296 298Right-handed 310
Helix 15
15
A
337 344Right-handed alpha
Helix 16
16
A
363 379Right-handed alpha
Helix 17
17
A
394 402Right-handed alpha
Helix 18
18
A
405 411Right-handed alpha
Helix 19
19
A
422 425Right-handed 310
Helix 20
20
A
466 475Right-handed alpha
Helix 21
21
A
567 570Right-handed alpha
Helix 22
22
A
574 579Right-handed 310
Helix 23
23
A
583 589Right-handed alpha
Helix 24
24
A
616 625Right-handed alpha
Helix 25
25
A
645 653Right-handed 310
Helix 26
26
A
666 674Right-handed alpha
Helix 27
27
A
685 690Right-handed 310
Helix 28
28
A
733 741Right-handed alpha
Helix 29
29
A
744 751Right-handed alpha
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There are 7 sheets in PDB entry 1B0K. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 64first strand
Strand 2
A
195 198anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 139first strand
Strand 2
A
95 98parallel
Strand 3
A
68 72parallel
Strand 4
A
160 164parallel
Strand 5
A
177 180parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
309 314first strand
Strand 2
A
201 208parallel
Strand 3
A
236 241parallel
Strand 4
A
267 269parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
321 323first strand
Strand 2
A
331 333anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
414 417first strand
Strand 2
A
386 390parallel
Strand 3
A
350 355parallel
Strand 4
A
439 443parallel
Strand 5
A
459 463parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
678 681first strand
Strand 2
A
656 661parallel
Strand 3
A
630 634parallel
Strand 4
A
556 560parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
696 700first strand
Strand 2
A
711 716anti-parallel
Strand 3
A
722 727anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il