Analysis of interatomic Contacts of Structural Units in PDB entry:
1B0U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1B0U entry

There is 1 chain in PDB entry 1B0U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 5HIS 262
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 1B0U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 52Right-handed alpha
Helix 2
2
A
85 94Right-handed alpha
Helix 3
3
A
110 120Right-handed alpha
Helix 4
4
A
126 139Right-handed alpha
Helix 5
5
A
144 147Right-handed alpha
Helix 6
6
A
151 153Right-handed 310
Helix 7
7
A
156 170Right-handed alpha
Helix 8
8
A
186 201Right-handed alpha
Helix 9
9
A
213 219Right-handed alpha
Helix 10
10
A
237 242Right-handed alpha
Helix 11
11
A
247 258Right-handed alpha
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There are 4 sheets in PDB entry 1B0U. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 29first strand
Strand 2
A
7 10anti-parallel
Strand 3
A
62 65anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 235first strand
Strand 2
A
222 227anti-parallel
Strand 3
A
34 38parallel
Strand 4
A
206 209parallel
Strand 5
A
174 178parallel
Strand 6
A
95 98parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 74first strand
Strand 2
A
80 82anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 14first strand
Strand 2
A
22 25anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il