Analysis of interatomic Contacts of Structural Units in PDB entry:
1BCC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1BCC entry

There are 10 chains in PDB entry 1BCC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 4ARG 445
B
 PRO 18LEU 439
C
 ALA 2TYR 380
D
 SER 1LYS 241
E
 SER 1GLY 196
F
 SER 10LYS 109
G
 ARG 2ASN 79
H
 LEU 13LYS 78
I
 UNK 105UNK 315
J
 THR 4LYS 62
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 87 helices in PDB entry 1BCC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 9Right-handed alpha
Helix 2
2
A
55 63Right-handed alpha
Helix 3
3
A
72 82Right-handed alpha
Helix 4
4
A
106 119Right-handed alpha
Helix 5
5
A
124 142Right-handed alpha
Helix 6
6
A
145 157Right-handed alpha
Helix 7
7
A
162 164Right-handed 310
Helix 8
8
A
171 176Right-handed alpha
Helix 9
9
A
179 189Right-handed alpha
Helix 10
10
A
192 194Right-handed 310
Helix 11
11
A
205 215Right-handed alpha
Helix 12
12
A
223 226Right-handed alpha
Helix 13
13
A
265 267Right-handed 310
Helix 14
14
A
269 277Right-handed alpha
Helix 15
15
A
293 300Right-handed alpha
Helix 16
16
A
331 347Right-handed alpha
Helix 17
17
A
351 369Right-handed alpha
Helix 18
18
A
373 386Right-handed alpha
Helix 19
19
A
392 400Right-handed alpha
Helix 20
20
A
404 414Right-handed alpha
Helix 21
21
A
434 440Right-handed alpha
Helix 22
22
B
55 57Right-handed 310
Helix 23
23
B
65 74Right-handed alpha
Helix 24
24
B
82 92Right-handed alpha
Helix 25
25
B
114 128Right-handed 310
Helix 26
26
B
134 138Right-handed alpha
Helix 27
27
B
141 153Right-handed 310
Helix 28
28
B
155 167Right-handed alpha
Helix 29
29
B
180 185Right-handed 310
Helix 30
30
B
188 196Right-handed alpha
Helix 31
31
B
201 203Right-handed 310
Helix 32
32
B
213 220Right-handed alpha
Helix 33
33
B
268 278Right-handed alpha
Helix 34
34
B
281 284Right-handed alpha
Helix 35
35
B
333 348Right-handed alpha
Helix 36
36
B
354 370Right-handed alpha
Helix 37
37
B
375 388Right-handed alpha
Helix 38
38
B
395 404Right-handed alpha
Helix 39
39
B
410 419Right-handed alpha
Helix 40
40
C
12 15Right-handed alpha
Helix 41
41
C
30 55Right-handed 310
Helix 42
42
C
63 72Right-handed alpha
Helix 43
43
C
77 103Right-handed alpha
Helix 44
44
C
107 109Right-handed 310
Helix 45
45
C
111 129Right-handed alpha
Helix 46
46
C
138 153Right-handed alpha
Helix 47
47
C
159 165Right-handed alpha
Helix 48
48
C
173 203Right-handed alpha
Helix 49
49
C
215 217Right-handed 310
Helix 50
50
C
221 246Right-handed alpha
Helix 51
51
C
254 257Right-handed 310
Helix 52
52
C
273 282Right-handed alpha
Helix 53
53
C
288 303Right-handed alpha
Helix 54
54
C
305 307Right-handed 310
Helix 55
55
C
320 341Right-handed alpha
Helix 56
56
C
346 364Right-handed alpha
Helix 57
57
C
366 378Right-handed alpha
Helix 58
58
D
23 35Right-handed alpha
Helix 59
59
D
37 39Right-handed 310
Helix 60
60
D
48 51Right-handed alpha
Helix 61
61
D
58 66Right-handed alpha
Helix 62
62
D
98 102Right-handed alpha
Helix 63
63
D
116 119Right-handed alpha
Helix 64
64
D
124 133Right-handed alpha
Helix 65
65
D
179 194Right-handed alpha
Helix 66
66
D
198 231Right-handed alpha
Helix 67
67
E
2 4Right-handed 310
Helix 68
68
E
25 58Right-handed alpha
Helix 69
69
E
66 71Right-handed alpha
Helix 70
70
E
78 80Right-handed 310
Helix 71
71
E
103 110Right-handed alpha
Helix 72
72
E
114 116Right-handed 310
Helix 73
73
E
123 125Right-handed 310
Helix 74
74
F
13 24Right-handed alpha
Helix 75
75
F
33 35Right-handed 310
Helix 76
76
F
41 49Right-handed alpha
Helix 77
77
F
52 71Right-handed alpha
Helix 78
78
F
77 79Right-handed 310
Helix 79
79
F
83 85Right-handed 310
Helix 80
80
F
91 107Right-handed alpha
Helix 81
81
G
33 66Right-handed alpha
Helix 82
82
H
16 26Right-handed alpha
Helix 83
83
H
28 44Right-handed alpha
Helix 84
84
H
55 76Right-handed alpha
Helix 85
85
J
5 13Right-handed alpha
Helix 86
86
J
17 47Right-handed alpha
Helix 87
87
J
52 59Right-handed alpha
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There are 9 sheets in PDB entry 1BCC. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 18first strand
Strand 2
A
24 29anti-parallel
Strand 3
A
195 201parallel
Strand 4
A
35 41anti-parallel
Strand 5
A
95 101anti-parallel
Strand 6
A
85 90anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
240 244first strand
Strand 2
A
422 426parallel
Strand 3
A
251 259anti-parallel
Strand 4
A
318 326anti-parallel
Strand 5
A
306 313anti-parallel
Strand 6
A
279 281anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
204 208first strand
Strand 2
B
44 51anti-parallel
Strand 3
B
104 112anti-parallel
Strand 4
B
95 101anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
243 247first strand
Strand 2
B
422 428parallel
Strand 3
B
252 260anti-parallel
Strand 4
B
320 329anti-parallel
Strand 5
B
310 315anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
23 25first strand
Strand 2
C
218 220anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
69 72first strand
Strand 2
D
81 84anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
74 77first strand
Strand 2
E
192 195anti-parallel
Strand 3
E
185 187anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
86 91first strand
Strand 2
E
94 100anti-parallel
Strand 3
E
132 136anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
147 150first strand
Strand 2
E
154 158anti-parallel
Strand 3
E
163 166anti-parallel
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