Analysis of interatomic Contacts of Structural Units in PDB entry:
1BLF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1BLF entry

There is 1 chain in PDB entry 1BLF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 5ARG 689
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 26 helices in PDB entry 1BLF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 29Right-handed alpha
Helix 2
2
A
42 50Right-handed alpha
Helix 3
3
A
61 68Right-handed alpha
Helix 4
4
A
126 136Right-handed alpha
Helix 5
5
A
145 150Right-handed alpha
Helix 6
6
A
167 169Right-handed 310
Helix 7
7
A
191 200Right-handed alpha
Helix 8
8
A
213 217Right-handed alpha
Helix 9
9
A
221 226Right-handed alpha
Helix 10
10
A
264 277Right-handed alpha
Helix 11
11
A
316 320Right-handed alpha
Helix 12
12
A
322 332Right-handed alpha
Helix 13
13
A
335 343Right-handed alpha
Helix 14
14
A
352 364Right-handed alpha
Helix 15
15
A
377 386Right-handed alpha
Helix 16
16
A
396 405Right-handed alpha
Helix 17
17
A
449 451Right-handed 310
Helix 18
18
A
468 478Right-handed alpha
Helix 19
19
A
483 485Right-handed 310
Helix 20
20
A
525 534Right-handed alpha
Helix 21
21
A
545 550Right-handed alpha
Helix 22
22
A
566 568Right-handed 310
Helix 23
23
A
604 618Right-handed alpha
Helix 24
24
A
657 661Right-handed alpha
Helix 25
25
A
663 674Right-handed alpha
Helix 26
26
A
679 687Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 1BLF. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 10first strand
Strand 2
A
34 38parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 59first strand
Strand 2
A
254 258anti-parallel
Strand 3
A
74 81anti-parallel
Strand 4
A
306 309anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 251first strand
Strand 2
A
91 98anti-parallel
Strand 3
A
206 210anti-parallel
Strand 4
A
114 116parallel
Strand 5
A
156 158parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 99first strand
Strand 2
A
227 229anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 350first strand
Strand 2
A
369 374parallel
Back to list of sheets
Back to top of page

There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
391 394first strand
Strand 2
A
596 599anti-parallel
Strand 3
A
408 415anti-parallel
Strand 4
A
645 650anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
590 592first strand
Strand 2
A
433 438anti-parallel
Strand 3
A
540 544anti-parallel
Strand 4
A
455 458parallel
Strand 5
A
489 491parallel
Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
438 440first strand
Strand 2
A
569 572anti-parallel
Strand 3
A
578 580anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il