Analysis of interatomic Contacts of Structural Units in PDB entry:
1BUV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1BUV entry

There are 2 chains in PDB entry 1BUV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
M
 ILE 114SER 287
T
 CYS 1001PRO 1184
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 1BUV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
M
137 154Right-handed alpha
Helix 2
2
M
233 245Right-handed alpha
Helix 3
3
M
273 276Right-handed alpha
Helix 4
4
M
279 282Right-handed alpha
Helix 5
5
T
1008 1014Right-handed alpha
Helix 6
6
T
1107 1109Right-handed 310
Helix 7
7
T
1112 1117Right-handed alpha
Helix 8
8
T
1121 1127Right-handed alpha
Helix 9
9
T
1160 1163Right-handed alpha
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There are 5 sheets in PDB entry 1BUV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
123 125first strand
Strand 2
M
158 160parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
179 182first strand
Strand 2
M
213 216parallel
Strand 3
M
200 202anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
T
1017 1022first strand
Strand 2
T
1083 1088anti-parallel
Strand 3
T
1104 1106anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
T
1042 1045first strand
Strand 2
T
1063 1066anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
T
1166 1169first strand
Strand 2
T
1175 1178anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il