Analysis of interatomic Contacts of Structural Units in PDB entry:
1CBM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1CBM entry

There are 4 chains in PDB entry 1CBM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 1HIS 146
B
VAL 1HIS 146
C
VAL 1HIS 146
D
VAL 1HIS 146
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 1CBM. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA
A
4 18Right-handed alpha
Helix 2
AB
A
19 34Right-handed alpha
Helix 3
AC
A
35 41Right-handed alpha
Helix 4
AD
A
50 56Right-handed alpha
Helix 5
AE
A
57 76Right-handed alpha
Helix 6
AF
A
85 93Right-handed alpha
Helix 7
AG
A
99 117Right-handed alpha
Helix 8
AH
A
123 143Right-handed alpha
Helix 9
BA
B
4 18Right-handed alpha
Helix 10
BB
B
19 34Right-handed alpha
Helix 11
BC
B
35 41Right-handed alpha
Helix 12
BD
B
50 56Right-handed alpha
Helix 13
BE
B
57 76Right-handed alpha
Helix 14
BF
B
85 93Right-handed alpha
Helix 15
BG
B
99 117Right-handed alpha
Helix 16
BH
B
123 143Right-handed alpha
Helix 17
CA
C
4 18Right-handed alpha
Helix 18
CB
C
19 34Right-handed alpha
Helix 19
CC
C
35 41Right-handed alpha
Helix 20
CD
C
50 56Right-handed alpha
Helix 21
CE
C
57 76Right-handed alpha
Helix 22
CF
C
85 93Right-handed alpha
Helix 23
CG
C
99 117Right-handed alpha
Helix 24
CH
C
123 143Right-handed alpha
Helix 25
A
D
4 18Right-handed alpha
Helix 26
DB
D
19 34Right-handed alpha
Helix 27
C
D
35 41Right-handed alpha
Helix 28
DD
D
50 56Right-handed alpha
Helix 29
DE
D
57 76Right-handed alpha
Helix 30
DF
D
85 93Right-handed alpha
Helix 31
G
D
99 117Right-handed alpha
Helix 32
DH
D
123 143Right-handed alpha
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There are no sheets in PDB entry 1CBM

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