Analysis of interatomic Contacts of Structural Units in PDB entry:
1COZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1COZ entry

There are 2 chains in PDB entry 1COZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 126
B
 MET 501ILE 626
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1COZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 27Right-handed alpha
Helix 2
2
A
38 44Right-handed alpha
Helix 3
3
A
52 61Right-handed alpha
Helix 4
4
A
75 83Right-handed 310
Helix 5
5
A
93 95Right-handed 310
Helix 6
6
A
100 102Right-handed 310
Helix 7
7
A
119 124Right-handed alpha
Helix 8
8
B
515 527Right-handed alpha
Helix 9
9
B
538 543Right-handed alpha
Helix 10
10
B
552 561Right-handed alpha
Helix 11
11
B
575 583Right-handed 310
Helix 12
12
B
593 595Right-handed 310
Helix 13
13
B
600 602Right-handed 310
Helix 14
14
B
619 624Right-handed alpha
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There are 2 sheets in PDB entry 1COZ. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 111first strand
Strand 2
A
88 92parallel
Strand 3
A
3 8parallel
Strand 4
A
30 36parallel
Strand 5
A
67 71parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
607 611first strand
Strand 2
B
588 592parallel
Strand 3
B
503 508parallel
Strand 4
B
530 536parallel
Strand 5
B
567 571parallel
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