Analysis of interatomic Contacts of Structural Units in PDB entry:
1CZA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1CZA entry

There is 1 chain in PDB entry 1CZA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
N
ASP 16THR 913
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 1CZA. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
N
16 26Right-handed alpha
Helix 2
2
N
27 30Right-handed 310
Helix 3
3
N
32 52Right-handed alpha
Helix 4
4
N
55 59Right-handed 310
Helix 5
5
N
115 120Right-handed alpha
Helix 6
6
N
122 142Right-handed alpha
Helix 7
7
N
184 197Right-handed alpha
Helix 8
8
N
208 221Right-handed alpha
Helix 9
9
N
243 245Right-handed 310
Helix 10
10
N
260 264Right-handed 310
Helix 11
11
N
275 284Right-handed alpha
Helix 12
12
N
293 298Right-handed alpha
Helix 13
13
N
298 316Right-handed alpha
Helix 14
14
N
319 323Right-handed 310
Helix 15
15
N
335 343Right-handed alpha
Helix 16
16
N
347 359Right-handed alpha
Helix 17
17
N
364 402Right-handed alpha
Helix 18
18
N
414 420Right-handed alpha
Helix 19
19
N
422 435Right-handed alpha
Helix 20
20
N
448 476Right-handed alpha
Helix 21
21
N
480 500Right-handed alpha
Helix 22
22
N
500 505Right-handed alpha
Helix 23
23
N
563 568Right-handed alpha
Helix 24
24
N
570 590Right-handed alpha
Helix 25
25
N
632 645Right-handed alpha
Helix 26
26
N
656 667Right-handed alpha
Helix 27
27
N
708 712Right-handed 310
Helix 28
28
N
723 732Right-handed alpha
Helix 29
29
N
741 745Right-handed 310
Helix 30
30
N
749 764Right-handed alpha
Helix 31
31
N
767 771Right-handed 310
Helix 32
32
N
783 791Right-handed alpha
Helix 33
33
N
796 808Right-handed alpha
Helix 34
34
N
812 849Right-handed alpha
Helix 35
35
N
862 868Right-handed alpha
Helix 36
36
N
870 883Right-handed alpha
Helix 37
37
N
897 913Right-handed alpha
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There are 6 sheets in PDB entry 1CZA. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
64 65first strand
Strand 2
N
254 258anti-parallel
Strand 3
N
234 241anti-parallel
Strand 4
N
224 230anti-parallel
Strand 5
N
406 413parallel
Strand 6
N
438 444parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
103 112first strand
Strand 2
N
90 100anti-parallel
Strand 3
N
78 85anti-parallel
Strand 4
N
150 154parallel
Strand 5
N
203 207parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
158 159first strand
Strand 2
N
167 168anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
512 513first strand
Strand 2
N
702 706anti-parallel
Strand 3
N
682 689anti-parallel
Strand 4
N
672 678anti-parallel
Strand 5
N
854 861parallel
Strand 6
N
886 892parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
552 560first strand
Strand 2
N
538 546anti-parallel
Strand 3
N
526 533anti-parallel
Strand 4
N
597 602parallel
Strand 5
N
650 655parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
606 610first strand
Strand 2
N
613 616anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il