Analysis of interatomic Contacts of Structural Units in PDB entry:
1DG3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1DG3 entry

There is 1 chain in PDB entry 1DG3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 6MET 583
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 1DG3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 34Right-handed alpha
Helix 2
2
A
46 49Right-handed 310
Helix 3
3
A
50 59Right-handed alpha
Helix 4
4
A
111 123Right-handed alpha
Helix 5
5
A
135 142Right-handed alpha
Helix 6
6
A
143 146Right-handed 310
Helix 7
7
A
147 152Right-handed alpha
Helix 8
8
A
167 174Right-handed 310
Helix 9
9
A
197 206Right-handed alpha
Helix 10
10
A
213 230Right-handed alpha
Helix 11
11
A
259 277Right-handed alpha
Helix 12
12
A
289 306Right-handed alpha
Helix 13
13
A
311 343Right-handed alpha
Helix 14
14
A
349 372Right-handed alpha
Helix 15
15
A
375 377Right-handed 310
Helix 16
16
A
378 425Right-handed alpha
Helix 17
17
A
431 450Right-handed alpha
Helix 18
18
A
456 479Right-handed alpha
Helix 19
19
A
483 563Right-handed alpha
Helix 20
20
A
565 583Right-handed alpha
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There are 2 sheets in PDB entry 1DG3. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 23first strand
Strand 2
A
11 17anti-parallel
Strand 3
A
77 84anti-parallel
Strand 4
A
92 99anti-parallel
Strand 5
A
38 44parallel
Strand 6
A
125 131parallel
Strand 7
A
177 183parallel
Strand 8
A
233 237parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 282first strand
Strand 2
A
286 287anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il