Analysis of interatomic Contacts of Structural Units in PDB entry:
1DOZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1DOZ entry

There is 1 chain in PDB entry 1DOZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ARG 310
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1DOZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 20Right-handed 310
Helix 2
2
A
21 30Right-handed alpha
Helix 3
3
A
36 50Right-handed alpha
Helix 4
4
A
54 75Right-handed alpha
Helix 5
5
A
92 103Right-handed alpha
Helix 6
6
A
121 137Right-handed alpha
Helix 7
7
A
150 168Right-handed alpha
Helix 8
8
A
169 174Right-handed alpha
Helix 9
9
A
187 193Right-handed 310
Helix 10
10
A
195 212Right-handed alpha
Helix 11
11
A
234 247Right-handed alpha
Helix 12
12
A
262 267Right-handed alpha
Helix 13
13
A
271 281Right-handed alpha
Helix 14
14
A
293 308Right-handed alpha
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There are 2 sheets in PDB entry 1DOZ. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 86first strand
Strand 2
A
4 12parallel
Strand 3
A
107 112parallel
Strand 4
A
140 143parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 221first strand
Strand 2
A
176 183parallel
Strand 3
A
250 254parallel
Strand 4
A
283 285parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il