Analysis of interatomic Contacts of Structural Units in PDB entry:
1EGC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1EGC entry

There are 4 chains in PDB entry 1EGC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 10ASN 396
B
 LEU 10ASN 396
C
 LEU 10ASN 396
D
 LEU 10ASN 396
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 1EGC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 34Right-handed alpha
Helix 2
2
A
39 45Right-handed alpha
Helix 3
3
A
50 59Right-handed alpha
Helix 4
4
A
77 90Right-handed alpha
Helix 5
5
A
92 110Right-handed alpha
Helix 6
6
A
114 125Right-handed alpha
Helix 7
7
A
144 146Right-handed 310
Helix 8
8
A
170 172Right-handed 310
Helix 9
9
A
190 193Right-handed alpha
Helix 10
10
A
234 236Right-handed 310
Helix 11
11
A
245 278Right-handed alpha
Helix 12
12
A
288 290Right-handed 310
Helix 13
13
A
292 321Right-handed alpha
Helix 14
14
A
326 356Right-handed alpha
Helix 15
15
A
361 373Right-handed alpha
Helix 16
16
A
379 393Right-handed alpha
Helix 17
17
B
18 34Right-handed alpha
Helix 18
18
B
36 45Right-handed alpha
Helix 19
19
B
50 58Right-handed alpha
Helix 20
20
B
68 70Right-handed 310
Helix 21
21
B
77 88Right-handed alpha
Helix 22
22
B
92 111Right-handed alpha
Helix 23
23
B
114 126Right-handed alpha
Helix 24
24
B
144 146Right-handed 310
Helix 25
25
B
190 192Right-handed 310
Helix 26
26
B
234 236Right-handed 310
Helix 27
27
B
244 278Right-handed alpha
Helix 28
28
B
288 290Right-handed 310
Helix 29
29
B
292 320Right-handed alpha
Helix 30
30
B
326 350Right-handed alpha
Helix 31
31
B
352 356Right-handed alpha
Helix 32
32
B
361 373Right-handed alpha
Helix 33
33
B
379 394Right-handed alpha
Helix 34
34
C
18 33Right-handed alpha
Helix 35
35
C
36 45Right-handed alpha
Helix 36
36
C
50 59Right-handed alpha
Helix 37
37
C
68 70Right-handed 310
Helix 38
38
C
77 90Right-handed alpha
Helix 39
39
C
92 111Right-handed alpha
Helix 40
40
C
114 120Right-handed alpha
Helix 41
41
C
122 126Right-handed alpha
Helix 42
42
C
144 146Right-handed 310
Helix 43
43
C
190 193Right-handed alpha
Helix 44
44
C
234 236Right-handed 310
Helix 45
45
C
243 278Right-handed alpha
Helix 46
46
C
288 290Right-handed 310
Helix 47
47
C
292 321Right-handed alpha
Helix 48
48
C
326 356Right-handed alpha
Helix 49
49
C
361 373Right-handed 310
Helix 50
50
C
379 394Right-handed alpha
Helix 51
51
D
18 31Right-handed alpha
Helix 52
52
D
36 45Right-handed alpha
Helix 53
53
D
50 58Right-handed alpha
Helix 54
54
D
68 70Right-handed 310
Helix 55
55
D
77 90Right-handed alpha
Helix 56
56
D
92 110Right-handed alpha
Helix 57
57
D
114 126Right-handed alpha
Helix 58
58
D
144 146Right-handed 310
Helix 59
59
D
190 193Right-handed alpha
Helix 60
60
D
234 236Right-handed 310
Helix 61
61
D
244 278Right-handed alpha
Helix 62
62
D
292 321Right-handed alpha
Helix 63
63
D
326 356Right-handed alpha
Helix 64
64
D
362 373Right-handed alpha
Helix 65
65
D
379 393Right-handed alpha
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There are 12 sheets in PDB entry 1EGC. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 134first strand
Strand 2
A
175 181parallel
Strand 3
A
194 200anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 153first strand
Strand 2
A
157 161anti-parallel
Strand 3
A
230 233anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 164first strand
Strand 2
A
225 227anti-parallel
Strand 3
A
206 208anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 134first strand
Strand 2
B
175 181parallel
Strand 3
B
194 200anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
150 153first strand
Strand 2
B
157 161anti-parallel
Strand 3
B
230 233anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 164first strand
Strand 2
B
225 227anti-parallel
Strand 3
B
206 208anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
131 134first strand
Strand 2
C
175 181parallel
Strand 3
C
194 200anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
150 154first strand
Strand 2
C
157 161anti-parallel
Strand 3
C
230 233anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
162 164first strand
Strand 2
C
225 227anti-parallel
Strand 3
C
206 208anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
150 153first strand
Strand 2
D
157 161anti-parallel
Strand 3
D
231 233anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
162 164first strand
Strand 2
D
225 227anti-parallel
Strand 3
D
206 208anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
194 200first strand
Strand 2
D
173 181anti-parallel
Strand 3
D
130 134parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il