Analysis of interatomic Contacts of Structural Units in PDB entry:
1ES7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ES7 entry

There are 4 chains in PDB entry 1ES7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 11ARG 114
B
THR 232PRO 317
C
LYS 511ARG 614
D
THR 732ILE 820
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 1ES7. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
52 56Right-handed 310
Helix 2
2
A
58 71Right-handed alpha
Helix 3
3
B
282 289Right-handed alpha
Helix 4
4
C
552 556Right-handed 310
Helix 5
5
C
558 571Right-handed alpha
Helix 6
6
D
782 789Right-handed alpha
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There are 10 sheets in PDB entry 1ES7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
15 17first strand
Strand 2
A
42 44anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
20 22first strand
Strand 2
A
37 39anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
32 34first strand
Strand 2
A
79 92anti-parallel
Strand 3
A
98 113anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
236 239first strand
Strand 2
B
252 255anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
272 278first strand
Strand 2
B
258 264anti-parallel
Strand 3
B
298 302anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
515 517first strand
Strand 2
C
542 544anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
520 522first strand
Strand 2
C
537 539anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
532 534first strand
Strand 2
C
579 592anti-parallel
Strand 3
C
598 613anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
736 739first strand
Strand 2
D
752 755anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
772 778first strand
Strand 2
D
758 764anti-parallel
Strand 3
D
798 802anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il