Analysis of interatomic Contacts of Structural Units in PDB entry:
1EUB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1EUB entry

There is 1 chain in PDB entry 1EUB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
TYR 104ASN 274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 1EUB. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
130 149Right-handed alpha
Helix 2
2
A
217 228Right-handed alpha
Helix 3
3
A
255 266Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1EUB.

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
152 154first strand
Strand 2
A
117 123parallel
Strand 3
A
163 168parallel
Strand 4
A
198 202parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il