Analysis of interatomic Contacts of Structural Units in PDB entry:
1EWD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1EWD entry

There are 4 chains in PDB entry 1EWD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1TYR 363
B
 PRO 1TYR 363
C
 PRO 1TYR 363
D
 PRO 1TYR 363
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 1EWD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 23Right-handed alpha
Helix 2
2
A
35 47Right-handed alpha
Helix 3
3
A
51 64Right-handed alpha
Helix 4
4
A
65 65Right-handed 310
Helix 5
5
A
66 70Right-handed 310
Helix 6
6
A
79 84Right-handed alpha
Helix 7
7
A
92 100Right-handed alpha
Helix 8
8
A
129 140Right-handed alpha
Helix 9
9
A
159 180Right-handed alpha
Helix 10
10
A
197 219Right-handed alpha
Helix 11
11
A
222 225Right-handed 310
Helix 12
12
A
244 260Right-handed alpha
Helix 13
13
A
275 289Right-handed alpha
Helix 14
14
A
302 314Right-handed alpha
Helix 15
15
A
316 318Right-handed 310
Helix 16
16
A
319 338Right-handed alpha
Helix 17
17
B
8 23Right-handed alpha
Helix 18
18
B
35 46Right-handed alpha
Helix 19
19
B
51 64Right-handed alpha
Helix 20
20
B
66 70Right-handed 310
Helix 21
21
B
79 84Right-handed alpha
Helix 22
22
B
92 100Right-handed alpha
Helix 23
23
B
129 140Right-handed alpha
Helix 24
24
B
159 180Right-handed alpha
Helix 25
25
B
197 219Right-handed alpha
Helix 26
26
B
222 225Right-handed 310
Helix 27
27
B
244 260Right-handed alpha
Helix 28
28
B
275 289Right-handed alpha
Helix 29
29
B
302 305Right-handed 310
Helix 30
30
B
306 314Right-handed alpha
Helix 31
31
B
316 318Right-handed 310
Helix 32
32
B
319 338Right-handed alpha
Helix 33
33
C
8 23Right-handed alpha
Helix 34
34
C
35 46Right-handed alpha
Helix 35
35
C
51 64Right-handed alpha
Helix 36
36
C
66 70Right-handed 310
Helix 37
37
C
79 84Right-handed alpha
Helix 38
38
C
92 100Right-handed alpha
Helix 39
39
C
129 140Right-handed alpha
Helix 40
40
C
159 180Right-handed alpha
Helix 41
41
C
197 219Right-handed alpha
Helix 42
42
C
222 225Right-handed 310
Helix 43
43
C
244 260Right-handed alpha
Helix 44
44
C
275 288Right-handed alpha
Helix 45
45
C
302 314Right-handed alpha
Helix 46
46
C
316 318Right-handed 310
Helix 47
47
C
319 338Right-handed alpha
Helix 48
48
C
354 358Right-handed 310
Helix 49
49
C
359 363Right-handed 310
Helix 50
50
D
8 23Right-handed alpha
Helix 51
51
D
35 47Right-handed alpha
Helix 52
52
D
51 64Right-handed alpha
Helix 53
53
D
79 85Right-handed alpha
Helix 54
54
D
92 100Right-handed alpha
Helix 55
55
D
129 140Right-handed alpha
Helix 56
56
D
159 180Right-handed alpha
Helix 57
57
D
197 219Right-handed alpha
Helix 58
58
D
222 225Right-handed 310
Helix 59
59
D
244 258Right-handed alpha
Helix 60
60
D
275 287Right-handed alpha
Helix 61
61
D
302 314Right-handed alpha
Helix 62
62
D
316 318Right-handed 310
Helix 63
63
D
319 338Right-handed alpha
Helix 64
64
D
355 359Right-handed 310
Helix 65
65
D
359 363Right-handed 310
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There are 8 sheets in PDB entry 1EWD. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 32first strand
Strand 2
A
73 78parallel
Strand 3
A
103 107parallel
Strand 4
A
142 151parallel
Strand 5
A
183 190parallel
Strand 6
A
227 228parallel
Strand 7
A
266 269parallel
Strand 8
A
296 299parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 114first strand
Strand 2
A
122 124anti-parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 32first strand
Strand 2
B
73 78parallel
Strand 3
B
103 107parallel
Strand 4
B
144 152parallel
Strand 5
B
183 191parallel
Strand 6
B
227 228parallel
Strand 7
B
266 269parallel
Strand 8
B
296 301parallel
Strand 9
B
28 32parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 114first strand
Strand 2
B
122 124anti-parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
28 31first strand
Strand 2
C
73 78parallel
Strand 3
C
103 107parallel
Strand 4
C
142 151parallel
Strand 5
C
183 190parallel
Strand 6
C
227 228parallel
Strand 7
C
266 269parallel
Strand 8
C
296 301parallel
Strand 9
C
28 31parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
112 114first strand
Strand 2
C
122 124anti-parallel
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There are 9 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
28 32first strand
Strand 2
D
73 78parallel
Strand 3
D
103 107parallel
Strand 4
D
142 152parallel
Strand 5
D
183 191parallel
Strand 6
D
227 228parallel
Strand 7
D
266 269parallel
Strand 8
D
296 301parallel
Strand 9
D
28 32parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
112 114first strand
Strand 2
D
122 124anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il