Analysis of interatomic Contacts of Structural Units in PDB entry:
1FO1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FO1 entry

There are 2 chains in PDB entry 1FO1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 123PHE 362
B
 GLU 203GLU 365
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 1FO1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
131 143Right-handed alpha
Helix 2
2
A
172 176Right-handed 310
Helix 3
3
A
205 219Right-handed alpha
Helix 4
4
A
231 234Right-handed 310
Helix 5
5
A
235 241Right-handed alpha
Helix 6
6
A
249 264Right-handed alpha
Helix 7
7
A
279 284Right-handed 310
Helix 8
8
A
285 290Right-handed alpha
Helix 9
9
A
305 313Right-handed 310
Helix 10
10
A
325 331Right-handed 310
Helix 11
11
A
333 345Right-handed alpha
Helix 12
12
B
205 219Right-handed alpha
Helix 13
13
B
235 241Right-handed alpha
Helix 14
14
B
249 264Right-handed alpha
Helix 15
15
B
279 284Right-handed 310
Helix 16
16
B
285 290Right-handed alpha
Helix 17
17
B
305 313Right-handed 310
Helix 18
18
B
325 331Right-handed 310
Helix 19
19
B
333 345Right-handed alpha
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There are 3 sheets in PDB entry 1FO1. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 180first strand
Strand 2
A
186 187anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 228first strand
Strand 2
A
269 271parallel
Strand 3
A
295 297parallel
Strand 4
A
319 321parallel
Strand 5
A
350 351parallel
Strand 6
A
354 355anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
220 221first strand
Strand 2
B
226 228anti-parallel
Strand 3
B
269 271parallel
Strand 4
B
295 297parallel
Strand 5
B
319 321parallel
Strand 6
B
350 351parallel
Strand 7
B
354 355anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il