Analysis of interatomic Contacts of Structural Units in PDB entry:
1FT8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FT8 entry

There are 5 chains in PDB entry 1FT8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 118PHE 362
B
 GLU 203PRO 367
C
 LYS 117PHE 362
D
 LEU 204GLU 365
E
 TRP 119VAL 175
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 1FT8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
126 130Right-handed 310
Helix 2
2
A
131 143Right-handed alpha
Helix 3
3
A
165 174Right-handed alpha
Helix 4
4
A
205 219Right-handed alpha
Helix 5
5
A
231 235Right-handed 310
Helix 6
6
A
249 264Right-handed alpha
Helix 7
7
A
279 284Right-handed 310
Helix 8
8
A
285 290Right-handed alpha
Helix 9
9
A
306 313Right-handed 310
Helix 10
10
A
325 331Right-handed 310
Helix 11
11
A
333 345Right-handed alpha
Helix 12
12
B
205 219Right-handed alpha
Helix 13
13
B
231 234Right-handed 310
Helix 14
14
B
235 241Right-handed alpha
Helix 15
15
B
249 264Right-handed alpha
Helix 16
16
B
279 284Right-handed 310
Helix 17
17
B
285 290Right-handed alpha
Helix 18
18
B
305 313Right-handed 310
Helix 19
19
B
325 331Right-handed 310
Helix 20
20
B
333 343Right-handed alpha
Helix 21
21
C
126 130Right-handed 310
Helix 22
22
C
131 143Right-handed alpha
Helix 23
23
C
165 174Right-handed alpha
Helix 24
24
C
205 218Right-handed alpha
Helix 25
25
C
235 242Right-handed alpha
Helix 26
26
C
249 264Right-handed alpha
Helix 27
27
C
279 284Right-handed 310
Helix 28
28
C
285 290Right-handed alpha
Helix 29
29
C
306 313Right-handed 310
Helix 30
30
C
325 331Right-handed 310
Helix 31
31
C
333 345Right-handed alpha
Helix 32
32
D
205 218Right-handed alpha
Helix 33
33
D
237 241Right-handed 310
Helix 34
34
D
249 264Right-handed alpha
Helix 35
35
D
279 284Right-handed 310
Helix 36
36
D
285 290Right-handed alpha
Helix 37
37
D
305 313Right-handed 310
Helix 38
38
D
325 331Right-handed 310
Helix 39
39
D
333 345Right-handed alpha
Helix 40
40
E
131 143Right-handed alpha
Helix 41
41
E
165 174Right-handed alpha
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There are 9 sheets in PDB entry 1FT8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 155first strand
Strand 2
A
158 163anti-parallel
Strand 3
A
119 124anti-parallel
Strand 4
A
190 194anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 180first strand
Strand 2
A
186 187anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 221first strand
Strand 2
A
226 228anti-parallel
Strand 3
A
269 271parallel
Strand 4
A
295 297parallel
Strand 5
A
319 321parallel
Strand 6
A
350 351parallel
Strand 7
A
354 355anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
220 221first strand
Strand 2
B
226 228anti-parallel
Strand 3
B
269 271parallel
Strand 4
B
295 297parallel
Strand 5
B
319 321parallel
Strand 6
B
350 351parallel
Strand 7
B
354 355anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
150 155first strand
Strand 2
C
158 163anti-parallel
Strand 3
C
119 124anti-parallel
Strand 4
C
190 194anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
179 180first strand
Strand 2
C
186 187anti-parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
220 221first strand
Strand 2
C
226 228anti-parallel
Strand 3
C
269 271parallel
Strand 4
C
295 297parallel
Strand 5
C
319 321parallel
Strand 6
C
350 351parallel
Strand 7
C
354 355anti-parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
220 221first strand
Strand 2
D
226 228anti-parallel
Strand 3
D
269 271parallel
Strand 4
D
295 297parallel
Strand 5
D
319 321parallel
Strand 6
D
350 351parallel
Strand 7
D
354 355anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
120 122first strand
Strand 2
E
161 163anti-parallel
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