Analysis of interatomic Contacts of Structural Units in PDB entry:
1FUU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FUU entry

There are 2 chains in PDB entry 1FUU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 11LYS 225
B
GLN 11ASN 394
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 1FUU. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
23 27Right-handed 310
Helix 2
2
A
29 39Right-handed alpha
Helix 3
3
A
45 58Right-handed alpha
Helix 4
4
A
68 83Right-handed alpha
Helix 5
5
A
98 113Right-handed alpha
Helix 6
6
A
128 139Right-handed alpha
Helix 7
7
A
145 155Right-handed alpha
Helix 8
8
A
170 177Right-handed alpha
Helix 9
9
A
179 190Right-handed alpha
Helix 10
10
A
204 215Right-handed alpha
Helix 11
11
B
22 27Right-handed 310
Helix 12
12
B
29 40Right-handed alpha
Helix 13
13
B
47 58Right-handed alpha
Helix 14
14
B
68 83Right-handed alpha
Helix 15
15
B
98 113Right-handed alpha
Helix 16
16
B
128 139Right-handed alpha
Helix 17
17
B
145 155Right-handed alpha
Helix 18
18
B
170 177Right-handed alpha
Helix 19
19
B
179 189Right-handed alpha
Helix 20
20
B
204 215Right-handed alpha
Helix 21
21
B
242 244Right-handed 310
Helix 22
22
B
245 254Right-handed alpha
Helix 23
23
B
268 281Right-handed alpha
Helix 24
24
B
294 306Right-handed alpha
Helix 25
25
B
318 320Right-handed 310
Helix 26
26
B
341 347Right-handed alpha
Helix 27
27
B
372 377Right-handed alpha
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There are 3 sheets in PDB entry 1FUU. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
12 14first strand
Strand 2
A
219 223anti-parallel
Strand 3
A
61 63parallel
Strand 4
A
195 199parallel
Strand 5
A
165 169parallel
Strand 6
A
92 95parallel
Strand 7
A
141 144parallel
Strand 8
A
120 123parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
12 14first strand
Strand 2
B
219 223anti-parallel
Strand 3
B
61 63parallel
Strand 4
B
195 199parallel
Strand 5
B
165 168parallel
Strand 6
B
92 95parallel
Strand 7
B
141 144parallel
Strand 8
B
120 123parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
286 289first strand
Strand 2
B
312 316parallel
Strand 3
B
262 266parallel
Strand 4
B
330 333parallel
Strand 5
B
358 364parallel
Strand 6
B
234 241parallel
Strand 7
B
382 384parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il