Analysis of interatomic Contacts of Structural Units in PDB entry:
1GLK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GLK entry

There is 1 chain in PDB entry 1GLK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 8GLN 465
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1GLK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 24Right-handed alpha
Helix 2
2
A
26 45Right-handed alpha
Helix 3
3
A
111 116Right-handed alpha
Helix 4
4
A
118 136Right-handed alpha
Helix 5
5
A
181 191Right-handed alpha
Helix 6
6
A
204 217Right-handed alpha
Helix 7
7
A
271 281Right-handed alpha
Helix 8
8
A
287 294Right-handed alpha
Helix 9
9
A
294 312Right-handed alpha
Helix 10
10
A
321 326Right-handed alpha
Helix 11
11
A
331 340Right-handed alpha
Helix 12
12
A
344 356Right-handed alpha
Helix 13
13
A
360 397Right-handed alpha
Helix 14
14
A
410 416Right-handed alpha
Helix 15
15
A
418 431Right-handed alpha
Helix 16
16
A
446 462Right-handed alpha
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There are 3 sheets in PDB entry 1GLK. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 59first strand
Strand 2
A
251 254anti-parallel
Strand 3
A
230 236anti-parallel
Strand 4
A
220 226anti-parallel
Strand 5
A
405 409parallel
Strand 6
A
437 440parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 109first strand
Strand 2
A
83 91anti-parallel
Strand 3
A
72 79anti-parallel
Strand 4
A
144 149parallel
Strand 5
A
197 203parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 156first strand
Strand 2
A
162 164anti-parallel
Strand 3
A
179 180anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il