Analysis of interatomic Contacts of Structural Units in PDB entry:
1GWS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GWS entry

There is 1 chain in PDB entry 1GWS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 10ARG 512
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 1GWS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 24Right-handed 310
Helix 2
2
A
35 44Right-handed alpha
Helix 3
3
A
48 52Right-handed 310
Helix 4
4
A
71 93Right-handed alpha
Helix 5
5
A
103 108Right-handed alpha
Helix 6
6
A
124 133Right-handed alpha
Helix 7
7
A
146 150Right-handed 310
Helix 8
8
A
170 174Right-handed 310
Helix 9
9
A
185 203Right-handed alpha
Helix 10
10
A
212 218Right-handed alpha
Helix 11
11
A
218 225Right-handed alpha
Helix 12
12
A
267 274Right-handed alpha
Helix 13
13
A
304 311Right-handed alpha
Helix 14
14
A
317 326Right-handed alpha
Helix 15
15
A
328 336Right-handed alpha
Helix 16
16
A
343 348Right-handed alpha
Helix 17
17
A
358 362Right-handed 310
Helix 18
18
A
363 369Right-handed alpha
Helix 19
19
A
371 385Right-handed alpha
Helix 20
20
A
394 398Right-handed 310
Helix 21
21
A
417 430Right-handed alpha
Helix 22
22
A
432 439Right-handed alpha
Helix 23
23
A
444 449Right-handed 310
Helix 24
24
A
461 466Right-handed 310
Helix 25
25
A
479 495Right-handed alpha
Helix 26
26
A
504 508Right-handed 310
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There are 5 sheets in PDB entry 1GWS. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 17first strand
Strand 2
A
31 34anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 56first strand
Strand 2
A
59 60anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 155first strand
Strand 2
A
160 162anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 244first strand
Strand 2
A
263 266anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
402 404first strand
Strand 2
A
414 416anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il