Analysis of interatomic Contacts of Structural Units in PDB entry:
1GZH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GZH entry

There are 4 chains in PDB entry 1GZH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 95LYS 292
B
 LEU 1724HIS 1972
C
 SER 95ARG 290
D
 ASN 1725VAL 1970
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 1GZH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
165 170Right-handed alpha
Helix 2
2
A
176 181Right-handed alpha
Helix 3
3
A
277 291Right-handed alpha
Helix 4
4
B
1740 1746Right-handed alpha
Helix 5
5
B
1772 1783Right-handed alpha
Helix 6
6
B
1812 1822Right-handed alpha
Helix 7
7
B
1828 1838Right-handed alpha
Helix 8
8
B
1842 1846Right-handed 310
Helix 9
9
B
1884 1895Right-handed alpha
Helix 10
10
B
1913 1917Right-handed 310
Helix 11
11
B
1927 1938Right-handed alpha
Helix 12
12
B
1943 1954Right-handed alpha
Helix 13
13
B
1962 1966Right-handed 310
Helix 14
14
C
165 170Right-handed alpha
Helix 15
15
C
176 181Right-handed alpha
Helix 16
16
C
277 289Right-handed alpha
Helix 17
17
D
1772 1783Right-handed alpha
Helix 18
18
D
1812 1822Right-handed alpha
Helix 19
19
D
1828 1838Right-handed alpha
Helix 20
20
D
1842 1846Right-handed 310
Helix 21
21
D
1884 1895Right-handed alpha
Helix 22
22
D
1913 1917Right-handed 310
Helix 23
23
D
1927 1938Right-handed alpha
Helix 24
24
D
1943 1954Right-handed alpha
Helix 25
25
D
1962 1966Right-handed 310
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There are 10 sheets in PDB entry 1GZH. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, BC, CA, CB, A, DB, C,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 112first strand
Strand 2
A
141 146anti-parallel
Strand 3
A
230 236anti-parallel
Strand 4
A
195 197anti-parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 127first strand
Strand 2
A
132 135anti-parallel
Strand 3
A
264 274parallel
Strand 4
A
251 258anti-parallel
Strand 5
A
156 163anti-parallel
Strand 6
A
214 219anti-parallel
Strand 7
A
204 207anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1786 1787first strand
Strand 2
B
1732 1736parallel
Strand 3
B
1801 1806parallel
Strand 4
B
1825 1827parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1851 1853first strand
Strand 2
B
1858 1860anti-parallel
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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1899 1904first strand
Strand 2
B
1873 1878parallel
Strand 3
B
1919 1922parallel
Strand 4
B
1941 1942parallel
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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
110 112first strand
Strand 2
C
141 146anti-parallel
Strand 3
C
230 236anti-parallel
Strand 4
C
195 198anti-parallel
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There are 7 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
124 127first strand
Strand 2
C
132 135anti-parallel
Strand 3
C
264 274parallel
Strand 4
C
251 258anti-parallel
Strand 5
C
156 163anti-parallel
Strand 6
C
214 219anti-parallel
Strand 7
C
204 207anti-parallel
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There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
1786 1787first strand
Strand 2
D
1732 1736parallel
Strand 3
D
1801 1806parallel
Strand 4
D
1825 1827parallel
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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
1851 1853first strand
Strand 2
D
1858 1860anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
1899 1904first strand
Strand 2
D
1873 1878parallel
Strand 3
D
1919 1922parallel
Strand 4
D
1941 1942parallel
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