Analysis of interatomic Contacts of Structural Units in PDB entry:
1H15


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1H15 entry

There are 6 chains in PDB entry 1H15 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 3ALA 182
B
 ASP 2ALA 190
C
 GLY 628SER 641
D
 GLU 3ALA 182
E
 ASP 2ALA 190
F
 GLY 628SER 641
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 1H15. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 51Right-handed alpha
Helix 2
2
A
55 76Right-handed alpha
Helix 3
3
B
64 73Right-handed alpha
Helix 4
4
B
73 78Right-handed alpha
Helix 5
5
B
78 85Right-handed 310
Helix 6
6
D
45 51Right-handed alpha
Helix 7
7
D
55 76Right-handed alpha
Helix 8
8
E
64 73Right-handed alpha
Helix 9
9
E
73 78Right-handed alpha
Helix 10
10
E
78 85Right-handed 310
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There are 14 sheets in PDB entry 1H15. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB, BC, A, DB, C, DD, EA, EB,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 43first strand
Strand 2
A
29 35anti-parallel
Strand 3
A
19 26anti-parallel
Strand 4
A
5 15anti-parallel
Strand 5
B
7 18anti-parallel
Strand 6
B
23 32anti-parallel
Strand 7
B
35 41anti-parallel
Strand 8
B
47 49anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 53first strand
Strand 2
C
629 630parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 93first strand
Strand 2
A
103 112anti-parallel
Strand 3
A
145 153anti-parallel
Strand 4
A
133 134anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 93first strand
Strand 2
A
103 112anti-parallel
Strand 3
A
145 153anti-parallel
Strand 4
A
138 139anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 128first strand
Strand 2
A
117 123anti-parallel
Strand 3
A
160 167anti-parallel
Strand 4
A
174 179anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
101 104first strand
Strand 2
B
113 122anti-parallel
Strand 3
B
155 163anti-parallel
Strand 4
B
142 144anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
101 104first strand
Strand 2
B
113 122anti-parallel
Strand 3
B
155 163anti-parallel
Strand 4
B
148 149anti-parallel
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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
128 133first strand
Strand 2
B
170 176anti-parallel
Strand 3
B
184 189anti-parallel
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There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
40 43first strand
Strand 2
D
29 35anti-parallel
Strand 3
D
19 26anti-parallel
Strand 4
D
5 14anti-parallel
Strand 5
E
8 18anti-parallel
Strand 6
E
23 32anti-parallel
Strand 7
E
35 41anti-parallel
Strand 8
E
47 49anti-parallel
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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
52 53first strand
Strand 2
F
629 630parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
88 93first strand
Strand 2
D
103 112anti-parallel
Strand 3
D
145 153anti-parallel
Strand 4
D
138 139anti-parallel
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There are 4 strands in DD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
126 127first strand
Strand 2
D
120 123anti-parallel
Strand 3
D
161 165anti-parallel
Strand 4
D
174 178anti-parallel
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There are 4 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
98 103first strand
Strand 2
E
115 120anti-parallel
Strand 3
E
156 161anti-parallel
Strand 4
E
142 144anti-parallel
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There are 4 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
136 138first strand
Strand 2
E
128 133anti-parallel
Strand 3
E
170 176anti-parallel
Strand 4
E
184 189anti-parallel
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