Analysis of interatomic Contacts of Structural Units in PDB entry:
1H5J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1H5J entry

There is 1 chain in PDB entry 1H5J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1SER 306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 1H5J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 29Right-handed alpha
Helix 2
2
A
31 45Right-handed alpha
Helix 3
3
A
51 55Right-handed 310
Helix 4
4
A
63 67Right-handed 310
Helix 5
5
A
76 91Right-handed alpha
Helix 6
6
A
96 112Right-handed alpha
Helix 7
7
A
130 138Right-handed alpha
Helix 8
8
A
144 155Right-handed alpha
Helix 9
9
A
159 167Right-handed alpha
Helix 10
10
A
168 172Right-handed 310
Helix 11
11
A
180 186Right-handed alpha
Helix 12
12
A
187 190Right-handed 310
Helix 13
13
A
198 209Right-handed alpha
Helix 14
14
A
231 239Right-handed alpha
Helix 15
15
A
244 253Right-handed alpha
Helix 16
16
A
259 269Right-handed alpha
Helix 17
17
A
269 285Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 1H5J.

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 176first strand
Strand 2
A
218 220anti-parallel
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