Analysis of interatomic Contacts of Structural Units in PDB entry:
1HDR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HDR entry

There is 1 chain in PDB entry 1HDR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 8PHE 243
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 1HDR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
B
A
20 28Right-handed alpha
Helix 2
D
A
59 74Right-handed alpha
Helix 3
E
A
94 124Right-handed alpha
Helix 4
F1
A
137 140Right-handed 310
Helix 5
F
A
147 164Right-handed alpha
Helix 6
G1
A
187 192Right-handed alpha
Helix 7
G2
A
198 200Right-handed 310
Helix 8
G
A
204 215Right-handed alpha
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There is 1 sheet ( S1) in PDB entry 1HDR.

There are 8 strands in S1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 53first strand
Strand 2
A
35 40parallel
Strand 3
A
10 15parallel
Strand 4
A
80 84parallel
Strand 5
A
129 134parallel
Strand 6
A
175 203parallel
Strand 7
A
225 232parallel
Strand 8
A
235 241parallel
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