Analysis of interatomic Contacts of Structural Units in PDB entry:
1HG8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HG8 entry

There is 1 chain in PDB entry 1HG8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 25SER 373
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 1HG8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 33Right-handed 310
Helix 2
2
A
34 42Right-handed alpha
Helix 3
3
A
108 112Right-handed 310
Helix 4
4
A
172 175Right-handed 310
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There are 4 sheets in PDB entry 1HG8. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 11 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 47first strand
Strand 2
A
68 71parallel
Strand 3
A
96 99parallel
Strand 4
A
139 142parallel
Strand 5
A
162 165parallel
Strand 6
A
201 204parallel
Strand 7
A
223 226parallel
Strand 8
A
252 255parallel
Strand 9
A
281 284parallel
Strand 10
A
320 323parallel
Strand 11
A
348 351parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 60first strand
Strand 2
A
88 90parallel
Strand 3
A
130 133parallel
Strand 4
A
154 157parallel
Strand 5
A
193 196parallel
Strand 6
A
215 217parallel
Strand 7
A
236 238parallel
Strand 8
A
266 269parallel
Strand 9
A
296 299parallel
Strand 10
A
336 339parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 147first strand
Strand 2
A
167 170parallel
Strand 3
A
206 209parallel
Strand 4
A
228 231parallel
Strand 5
A
257 260parallel
Strand 6
A
286 291parallel
Strand 7
A
325 329parallel
Strand 8
A
354 356parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 250first strand
Strand 2
A
276 279parallel
Strand 3
A
315 318parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il