Analysis of interatomic Contacts of Structural Units in PDB entry:
1HIB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HIB entry

There is 1 chain in PDB entry 1HIB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 3SER 153
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 1HIB. Click on helix number for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
H1
A
96 98Right-handed 310
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There are 4 sheets in PDB entry 1HIB. Click on sheet of interest to get list of strands forming it: BRL, L1, L2, L3,

There are 7 strands in BRL sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
3 12first strand
Strand 2
A
41 47anti-parallel
Strand 3
A
54 63anti-parallel
Strand 4
A
99 106anti-parallel
Strand 5
A
109 115anti-parallel
Strand 6
A
145 153anti-parallel
Strand 7
A
3 12anti-parallel
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There are 2 strands in L1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
16 22first strand
Strand 2
A
25 31anti-parallel
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There are 2 strands in L2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
66 74first strand
Strand 2
A
77 85anti-parallel
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There are 2 strands in L3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
121 125first strand
Strand 2
A
130 135anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il