Analysis of interatomic Contacts of Structural Units in PDB entry:
1HJW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HJW entry

There are 2 chains in PDB entry 1HJW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 22THR 383
B
 TYR 22THR 383
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 1HJW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 35Right-handed 310
Helix 2
2
A
36 40Right-handed 310
Helix 3
3
A
42 46Right-handed 310
Helix 4
4
A
72 83Right-handed alpha
Helix 5
5
A
102 112Right-handed alpha
Helix 6
6
A
112 130Right-handed alpha
Helix 7
7
A
143 145Right-handed 310
Helix 8
8
A
146 166Right-handed alpha
Helix 9
9
A
181 189Right-handed alpha
Helix 10
10
A
190 198Right-handed alpha
Helix 11
11
A
210 214Right-handed 310
Helix 12
12
A
226 230Right-handed 310
Helix 13
13
A
236 248Right-handed alpha
Helix 14
14
A
250 252Right-handed 310
Helix 15
15
A
296 303Right-handed alpha
Helix 16
16
A
330 344Right-handed alpha
Helix 17
17
A
353 357Right-handed 310
Helix 18
18
A
370 382Right-handed alpha
Helix 19
19
B
31 35Right-handed 310
Helix 20
20
B
36 40Right-handed 310
Helix 21
21
B
42 46Right-handed 310
Helix 22
22
B
72 82Right-handed alpha
Helix 23
23
B
83 86Right-handed 310
Helix 24
24
B
101 112Right-handed alpha
Helix 25
25
B
112 131Right-handed alpha
Helix 26
26
B
143 145Right-handed 310
Helix 27
27
B
146 165Right-handed alpha
Helix 28
28
B
181 187Right-handed alpha
Helix 29
29
B
190 198Right-handed alpha
Helix 30
30
B
226 230Right-handed 310
Helix 31
31
B
236 247Right-handed alpha
Helix 32
32
B
250 252Right-handed 310
Helix 33
33
B
296 303Right-handed alpha
Helix 34
34
B
330 344Right-handed alpha
Helix 35
35
B
353 357Right-handed 310
Helix 36
36
B
370 382Right-handed alpha
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There are 4 sheets in PDB entry 1HJW. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 11 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 29first strand
Strand 2
A
348 352parallel
Strand 3
A
254 259parallel
Strand 4
A
200 204parallel
Strand 5
A
173 179parallel
Strand 6
A
134 138parallel
Strand 7
A
91 97parallel
Strand 8
A
53 62parallel
Strand 9
A
23 29parallel
Strand 10
A
348 352parallel
Strand 11
A
23 29parallel
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There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 281first strand
Strand 2
A
261 267anti-parallel
Strand 3
A
293 295anti-parallel
Strand 4
A
261 267anti-parallel
Strand 5
A
307 310first strand
Strand 6
A
317 321anti-parallel
Strand 7
A
324 327anti-parallel
Strand 8
A
261 267anti-parallel
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There are 10 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 29first strand
Strand 2
B
348 352parallel
Strand 3
B
254 259parallel
Strand 4
B
200 204parallel
Strand 5
B
173 179parallel
Strand 6
B
134 138parallel
Strand 7
B
91 97parallel
Strand 8
B
53 61parallel
Strand 9
B
23 29parallel
Strand 10
B
23 29first strand
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There are 8 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
278 281first strand
Strand 2
B
261 267anti-parallel
Strand 3
B
293 295anti-parallel
Strand 4
B
261 267anti-parallel
Strand 5
B
307 311first strand
Strand 6
B
316 321anti-parallel
Strand 7
B
324 327anti-parallel
Strand 8
B
261 267anti-parallel
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