Analysis of interatomic Contacts of Structural Units in PDB entry:
1HKC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HKC entry

There is 1 chain in PDB entry 1HKC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 16GLU 914
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 1HKC. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
17 25Right-handed alpha
Helix 2
2
A
27 29Right-handed 310
Helix 3
3
A
33 51Right-handed alpha
Helix 4
4
A
56 58Right-handed 310
Helix 5
5
A
123 139Right-handed alpha
Helix 6
6
A
185 196Right-handed alpha
Helix 7
7
A
209 218Right-handed alpha
Helix 8
8
A
242 244Right-handed 310
Helix 9
9
A
261 263Right-handed 310
Helix 10
10
A
276 283Right-handed alpha
Helix 11
11
A
294 296Right-handed 310
Helix 12
12
A
299 315Right-handed alpha
Helix 13
13
A
320 322Right-handed 310
Helix 14
14
A
336 342Right-handed alpha
Helix 15
15
A
348 359Right-handed alpha
Helix 16
16
A
365 400Right-handed alpha
Helix 17
17
A
415 419Right-handed alpha
Helix 18
18
A
423 434Right-handed alpha
Helix 19
19
A
450 477Right-handed alpha
Helix 20
20
A
481 499Right-handed alpha
Helix 21
21
A
504 506Right-handed 310
Helix 22
22
A
564 567Right-handed alpha
Helix 23
23
A
574 588Right-handed alpha
Helix 24
24
A
633 644Right-handed alpha
Helix 25
25
A
657 666Right-handed alpha
Helix 26
26
A
690 692Right-handed 310
Helix 27
27
A
709 711Right-handed 310
Helix 28
28
A
724 731Right-handed alpha
Helix 29
29
A
750 763Right-handed alpha
Helix 30
30
A
768 770Right-handed 310
Helix 31
31
A
784 790Right-handed alpha
Helix 32
32
A
797 807Right-handed alpha
Helix 33
33
A
813 849Right-handed alpha
Helix 34
34
A
863 867Right-handed alpha
Helix 35
35
A
871 882Right-handed alpha
Helix 36
36
A
899 912Right-handed alpha
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There are 5 sheets in PDB entry 1HKC. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
202 207first strand
Strand 2
A
149 154parallel
Strand 3
A
78 85parallel
Strand 4
A
90 97anti-parallel
Strand 5
A
106 112anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
254 258first strand
Strand 2
A
234 241anti-parallel
Strand 3
A
224 230anti-parallel
Strand 4
A
406 413parallel
Strand 5
A
438 444parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
649 655first strand
Strand 2
A
596 602parallel
Strand 3
A
526 533parallel
Strand 4
A
537 546anti-parallel
Strand 5
A
552 561anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
702 706first strand
Strand 2
A
682 689anti-parallel
Strand 3
A
672 678anti-parallel
Strand 4
A
854 861parallel
Strand 5
A
886 892parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
605 608first strand
Strand 2
A
614 618anti-parallel
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