Analysis of interatomic Contacts of Structural Units in PDB entry:
1HTI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HTI entry

There are 2 chains in PDB entry 1HTI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 1GLN 248
B
ALA 1GLN 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 1HTI. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
17 31Right-handed alpha
Helix 2
2
A
44 46Right-handed 310
Helix 3
3
A
47 55Right-handed alpha
Helix 4
4
A
79 86Right-handed alpha
Helix 5
5
A
95 101Right-handed alpha
Helix 6
6
A
105 119Right-handed alpha
Helix 7
7
A
130 136Right-handed alpha
Helix 8
8
A
138 152Right-handed alpha
Helix 9
9
A
177 196Right-handed alpha
Helix 10
10
A
197 202Right-handed alpha
Helix 11
11
A
216 222Right-handed alpha
Helix 12
12
A
233 237Right-handed 310
Helix 13
13
A
238 245Right-handed alpha
Helix 14
14
A
246 248Right-handed 310
Helix 15
15
B
17 29Right-handed alpha
Helix 16
16
B
44 46Right-handed 310
Helix 17
17
B
47 55Right-handed alpha
Helix 18
18
B
79 87Right-handed alpha
Helix 19
19
B
95 101Right-handed alpha
Helix 20
20
B
105 119Right-handed alpha
Helix 21
21
B
130 136Right-handed alpha
Helix 22
22
B
138 153Right-handed alpha
Helix 23
23
B
156 158Right-handed 310
Helix 24
24
B
166 170Right-handed 310
Helix 25
25
B
177 196Right-handed alpha
Helix 26
26
B
197 204Right-handed alpha
Helix 27
27
B
216 221Right-handed alpha
Helix 28
28
B
233 238Right-handed 310
Helix 29
29
B
239 245Right-handed alpha
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There are 2 sheets in PDB entry 1HTI. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
6 11first strand
Strand 2
A
37 42parallel
Strand 3
A
60 63parallel
Strand 4
A
90 93parallel
Strand 5
A
122 127parallel
Strand 6
A
160 164parallel
Strand 7
A
206 208parallel
Strand 8
A
228 231parallel
Strand 9
A
6 11parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
6 11first strand
Strand 2
B
37 42parallel
Strand 3
B
59 63parallel
Strand 4
B
90 93parallel
Strand 5
B
122 127parallel
Strand 6
B
160 164parallel
Strand 7
B
206 210parallel
Strand 8
B
228 231parallel
Strand 9
B
6 11parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il