Analysis of interatomic Contacts of Structural Units in PDB entry:
1HVD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1HVD entry

There is 1 chain in PDB entry 1HVD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 4CYS 316
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 1HVD. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
17 28Right-handed alpha
Helix 2
2
A
35 44Right-handed alpha
Helix 3
3
A
47 61Right-handed alpha
Helix 4
4
A
65 72Right-handed alpha
Helix 5
5
A
75 85Right-handed alpha
Helix 6
6
A
88 100Right-handed alpha
Helix 7
7
A
107 116Right-handed alpha
Helix 8
8
A
119 133Right-handed alpha
Helix 9
9
A
137 144Right-handed alpha
Helix 10
10
A
147 158Right-handed alpha
Helix 11
11
A
169 184Right-handed alpha
Helix 12
12
A
191 200Right-handed alpha
Helix 13
13
A
203 217Right-handed alpha
Helix 14
14
A
221 225Right-handed alpha
Helix 15
15
A
232 245Right-handed alpha
Helix 16
16
A
247 259Right-handed alpha
Helix 17
17
A
266 275Right-handed alpha
Helix 18
18
A
281 292Right-handed alpha
Helix 19
19
A
296 303Right-handed alpha
Helix 20
20
A
306 314Right-handed alpha
Back to top of page
There are no sheets in PDB entry 1HVD

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il