Analysis of interatomic Contacts of Structural Units in PDB entry:
1JLH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1JLH entry

There are 4 chains in PDB entry 1JLH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1VAL 556
B
 ALA 1VAL 556
C
 ALA 1VAL 556
D
 ALA 1VAL 556
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are150 helices in PDB entry 1JLH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 6Right-handed alpha
Helix 2
2
A
6 20Right-handed alpha
Helix 3
3
A
21 23Right-handed 310
Helix 4
4
A
24 32Right-handed alpha
Helix 5
5
A
34 39Right-handed alpha
Helix 6
6
A
60 74Right-handed alpha
Helix 7
7
A
75 85Right-handed alpha
Helix 8
8
A
98 103Right-handed alpha
Helix 9
9
A
117 137Right-handed alpha
Helix 10
10
A
156 159Right-handed 310
Helix 11
11
A
160 170Right-handed alpha
Helix 12
12
A
171 174Right-handed 310
Helix 13
13
A
187 196Right-handed alpha
Helix 14
14
A
197 198Right-handed 310
Helix 15
15
A
199 201Right-handed 310
Helix 16
16
A
214 233Right-handed alpha
Helix 17
17
A
234 236Right-handed 310
Helix 18
18
A
237 241Right-handed alpha
Helix 19
19
A
248 256Right-handed alpha
Helix 20
20
A
258 261Right-handed 310
Helix 21
21
A
270 274Right-handed 310
Helix 22
22
A
277 279Right-handed 310
Helix 23
23
A
280 288Right-handed alpha
Helix 24
24
A
288 309Right-handed alpha
Helix 25
25
A
310 313Right-handed 310
Helix 26
26
A
314 329Right-handed alpha
Helix 27
27
A
341 345Right-handed 310
Helix 28
28
A
346 360Right-handed alpha
Helix 29
29
A
385 389Right-handed 310
Helix 30
30
A
390 397Right-handed alpha
Helix 31
31
A
415 417Right-handed 310
Helix 32
32
A
418 438Right-handed alpha
Helix 33
33
A
440 451Right-handed alpha
Helix 34
34
A
454 462Right-handed alpha
Helix 35
35
A
463 466Right-handed 310
Helix 36
36
A
482 505Right-handed alpha
Helix 37
37
A
511 513Right-handed 310
Helix 38
38
A
514 529Right-handed alpha
Helix 39
39
A
538 552Right-handed alpha
Helix 40
40
B
1 6Right-handed alpha
Helix 41
41
B
6 20Right-handed alpha
Helix 42
42
B
21 23Right-handed 310
Helix 43
43
B
24 32Right-handed alpha
Helix 44
44
B
34 39Right-handed alpha
Helix 45
45
B
60 74Right-handed alpha
Helix 46
46
B
75 85Right-handed alpha
Helix 47
47
B
98 103Right-handed alpha
Helix 48
48
B
117 138Right-handed alpha
Helix 49
49
B
156 159Right-handed 310
Helix 50
50
B
160 170Right-handed alpha
Helix 51
51
B
171 174Right-handed 310
Helix 52
52
B
187 196Right-handed alpha
Helix 53
53
B
214 233Right-handed alpha
Helix 54
54
B
234 240Right-handed 310
Helix 55
55
B
248 256Right-handed alpha
Helix 56
56
B
258 261Right-handed 310
Helix 57
57
B
270 274Right-handed 310
Helix 58
58
B
277 279Right-handed 310
Helix 59
59
B
280 288Right-handed alpha
Helix 60
60
B
288 309Right-handed alpha
Helix 61
61
B
310 313Right-handed 310
Helix 62
62
B
314 329Right-handed alpha
Helix 63
63
B
341 345Right-handed 310
Helix 64
64
B
346 360Right-handed alpha
Helix 65
65
B
385 389Right-handed 310
Helix 66
66
B
390 397Right-handed alpha
Helix 67
67
B
414 417Right-handed 310
Helix 68
68
B
418 438Right-handed alpha
Helix 69
69
B
440 451Right-handed alpha
Helix 70
70
B
454 462Right-handed alpha
Helix 71
71
B
463 466Right-handed 310
Helix 72
72
B
482 505Right-handed alpha
Helix 73
73
B
511 513Right-handed 310
Helix 74
74
B
514 529Right-handed alpha
Helix 75
75
B
538 552Right-handed alpha
Helix 76
76
C
6 20Right-handed alpha
Helix 77
77
C
21 23Right-handed 310
Helix 78
78
C
24 32Right-handed alpha
Helix 79
79
C
34 39Right-handed alpha
Helix 80
80
C
60 74Right-handed alpha
Helix 81
81
C
75 85Right-handed alpha
Helix 82
82
C
98 103Right-handed alpha
Helix 83
83
C
117 138Right-handed alpha
Helix 84
84
C
156 159Right-handed 310
Helix 85
85
C
160 170Right-handed alpha
Helix 86
86
C
171 174Right-handed 310
Helix 87
87
C
187 196Right-handed alpha
Helix 88
88
C
197 198Right-handed 310
Helix 89
89
C
199 201Right-handed 310
Helix 90
90
C
214 232Right-handed alpha
Helix 91
91
C
234 240Right-handed 310
Helix 92
92
C
248 256Right-handed alpha
Helix 93
93
C
258 261Right-handed 310
Helix 94
94
C
270 274Right-handed 310
Helix 95
95
C
277 279Right-handed 310
Helix 96
96
C
280 288Right-handed alpha
Helix 97
97
C
288 309Right-handed alpha
Helix 98
98
C
310 313Right-handed 310
Helix 99
99
C
314 329Right-handed alpha
Helix 100
100
C
341 345Right-handed 310
Helix 101
101
C
346 360Right-handed alpha
Helix 102
102
C
385 389Right-handed 310
Helix 103
103
C
390 397Right-handed alpha
Helix 104
104
C
415 417Right-handed 310
Helix 105
105
C
418 438Right-handed alpha
Helix 106
106
C
440 452Right-handed alpha
Helix 107
107
C
454 462Right-handed alpha
Helix 108
108
C
463 466Right-handed 310
Helix 109
109
C
482 505Right-handed alpha
Helix 110
110
C
511 513Right-handed 310
Helix 111
111
C
514 529Right-handed alpha
Helix 112
112
C
538 552Right-handed alpha
Helix 113
113
D
6 20Right-handed alpha
Helix 114
114
D
21 23Right-handed 310
Helix 115
115
D
24 32Right-handed alpha
Helix 116
116
D
34 39Right-handed alpha
Helix 117
117
D
60 74Right-handed alpha
Helix 118
118
D
75 85Right-handed alpha
Helix 119
119
D
98 103Right-handed alpha
Helix 120
120
D
117 137Right-handed alpha
Helix 121
121
D
156 159Right-handed 310
Helix 122
122
D
160 170Right-handed alpha
Helix 123
123
D
171 174Right-handed 310
Helix 124
124
D
187 196Right-handed alpha
Helix 125
125
D
197 198Right-handed 310
Helix 126
126
D
199 201Right-handed 310
Helix 127
127
D
214 232Right-handed alpha
Helix 128
128
D
234 240Right-handed 310
Helix 129
129
D
248 255Right-handed alpha
Helix 130
130
D
258 260Right-handed 310
Helix 131
131
D
270 274Right-handed 310
Helix 132
132
D
277 279Right-handed 310
Helix 133
133
D
280 288Right-handed alpha
Helix 134
134
D
288 309Right-handed alpha
Helix 135
135
D
310 313Right-handed 310
Helix 136
136
D
314 329Right-handed alpha
Helix 137
137
D
341 345Right-handed 310
Helix 138
138
D
346 360Right-handed alpha
Helix 139
139
D
385 389Right-handed 310
Helix 140
140
D
390 397Right-handed alpha
Helix 141
141
D
415 417Right-handed 310
Helix 142
142
D
418 438Right-handed alpha
Helix 143
143
D
440 452Right-handed alpha
Helix 144
144
D
454 462Right-handed alpha
Helix 145
145
D
463 466Right-handed 310
Helix 146
146
D
482 505Right-handed alpha
Helix 147
147
D
511 513Right-handed 310
Helix 148
148
D
514 525Right-handed alpha
Helix 149
149
D
526 528Right-handed 310
Helix 150
150
D
538 552Right-handed alpha
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There are 11 sheets in PDB entry 1JLH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 44first strand
Strand 2
A
49 53anti-parallel
Strand 3
A
473 480anti-parallel
Strand 4
A
403 410parallel
Strand 5
A
334 339parallel
Strand 6
A
377 379parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 112first strand
Strand 2
A
115 116anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 183first strand
Strand 2
A
150 154parallel
Strand 3
A
203 208parallel
Strand 4
A
242 245parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 44first strand
Strand 2
B
49 53anti-parallel
Strand 3
B
473 480anti-parallel
Strand 4
B
403 410parallel
Strand 5
B
334 339parallel
Strand 6
B
377 379parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 112first strand
Strand 2
B
115 116anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
179 183first strand
Strand 2
B
150 154parallel
Strand 3
B
203 208parallel
Strand 4
B
242 245parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
40 44first strand
Strand 2
C
49 53anti-parallel
Strand 3
C
473 480anti-parallel
Strand 4
C
403 410parallel
Strand 5
C
334 339parallel
Strand 6
C
377 379parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
179 183first strand
Strand 2
C
150 154parallel
Strand 3
C
203 208parallel
Strand 4
C
242 245parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
40 44first strand
Strand 2
D
49 53anti-parallel
Strand 3
D
473 480anti-parallel
Strand 4
D
403 410parallel
Strand 5
D
334 339parallel
Strand 6
D
377 379parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
111 112first strand
Strand 2
D
115 116anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
179 183first strand
Strand 2
D
150 154parallel
Strand 3
D
203 208parallel
Strand 4
D
242 245parallel
Strand 5
D
262 263parallel
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