Analysis of interatomic Contacts of Structural Units in PDB entry:
1K05


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1K05 entry

There are 3 chains in PDB entry 1K05 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 916ARG 1050
B
 PRO 906GLY 1047
C
 GLN 907GLN 1048
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1K05. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
922 942Right-handed alpha
Helix 2
2
A
946 972Right-handed alpha
Helix 3
3
A
973 975Right-handed 310
Helix 4
4
A
976 1007Right-handed alpha
Helix 5
5
A
1012 1047Right-handed alpha
Helix 6
6
B
918 921Right-handed 310
Helix 7
7
B
922 942Right-handed alpha
Helix 8
8
B
946 972Right-handed alpha
Helix 9
9
B
973 975Right-handed 310
Helix 10
10
B
976 1007Right-handed alpha
Helix 11
11
B
1011 1047Right-handed alpha
Helix 12
12
C
918 921Right-handed 310
Helix 13
13
C
922 943Right-handed alpha
Helix 14
14
C
946 972Right-handed alpha
Helix 15
15
C
976 1007Right-handed alpha
Helix 16
16
C
1010 1046Right-handed alpha
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There are no sheets in PDB entry 1K05
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il