Analysis of interatomic Contacts of Structural Units in PDB entry:
1LRX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LRX entry

There is 1 chain in PDB entry 1LRX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLY 396THR 659
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 1LRX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
396 398Right-handed 310
Helix 2
2
B
548 550Right-handed 310
Helix 3
3
B
591 593Right-handed 310
Helix 4
4
B
624 626Right-handed 310
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There are 6 sheets in PDB entry 1LRX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
418 424first strand
Strand 2
B
408 413anti-parallel
Strand 3
B
400 405anti-parallel
Strand 4
B
649 654anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
429 434first strand
Strand 2
B
440 445anti-parallel
Strand 3
B
450 455anti-parallel
Strand 4
B
464 470anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
476 483first strand
Strand 2
B
487 492anti-parallel
Strand 3
B
497 502anti-parallel
Strand 4
B
507 513anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
519 524first strand
Strand 2
B
530 535anti-parallel
Strand 3
B
541 546anti-parallel
Strand 4
B
551 557anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
563 568first strand
Strand 2
B
574 579anti-parallel
Strand 3
B
585 589anti-parallel
Strand 4
B
595 599anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
608 613first strand
Strand 2
B
617 622anti-parallel
Strand 3
B
628 632anti-parallel
Strand 4
B
637 642anti-parallel
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