Analysis of interatomic Contacts of Structural Units in PDB entry:
1LU7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1LU7 entry

There is 1 chain in PDB entry 1LU7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1GLN 272
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 1LU7. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
98 111Right-handed alpha
Helix 2
2
A
112 113Right-handed 310
Helix 3
3
A
114 119Right-handed 310
Helix 4
4
A
122 145Right-handed alpha
Helix 5
5
A
145 156Right-handed alpha
Helix 6
6
A
171 192Right-handed alpha
Helix 7
7
A
193 212Right-handed alpha
Helix 8
8
A
213 215Right-handed 310
Helix 9
9
A
223 241Right-handed alpha
Helix 10
10
A
246 253Right-handed alpha
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There are 3 sheets in PDB entry 1LU7. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
22 27first strand
Strand 2
A
14 18anti-parallel
Strand 3
A
54 56anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
50 52first strand
Strand 2
A
65 67anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
82 83first strand
Strand 2
A
93 94anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il