Analysis of interatomic Contacts of Structural Units in PDB entry:
1M33


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1M33 entry

There is 1 chain in PDB entry 1M33 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3SER 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 1M33. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 31Right-handed 310
Helix 2
2
A
32 38Right-handed alpha
Helix 3
3
A
60 70Right-handed alpha
Helix 4
4
A
82 95Right-handed alpha
Helix 5
5
A
121 142Right-handed alpha
Helix 6
6
A
144 148Right-handed 310
Helix 7
7
A
153 161Right-handed alpha
Helix 8
8
A
163 165Right-handed 310
Helix 9
9
A
172 186Right-handed alpha
Helix 10
10
A
190 195Right-handed 310
Helix 11
11
A
213 222Right-handed alpha
Helix 12
12
A
236 241Right-handed alpha
Helix 13
13
A
241 254Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1M33.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 9first strand
Strand 2
A
41 45anti-parallel
Strand 3
A
15 19parallel
Strand 4
A
76 81parallel
Strand 5
A
99 105parallel
Strand 6
A
199 204parallel
Strand 7
A
226 230parallel
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