Analysis of interatomic Contacts of Structural Units in PDB entry:
1MKP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MKP entry

There is 1 chain in PDB entry 1MKP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 204LEU 347
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 1MKP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
225 230Right-handed alpha
Helix 2
2
A
269 284Right-handed 310
Helix 3
3
A
298 311Right-handed alpha
Helix 4
4
A
316 326Right-handed alpha
Helix 5
5
A
337 345Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1MKP.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 211first strand
Strand 2
A
214 217anti-parallel
Strand 3
A
288 292parallel
Strand 4
A
233 238parallel
Strand 5
A
253 257parallel
Strand 6
A
246 250anti-parallel
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