Analysis of interatomic Contacts of Structural Units in PDB entry:
1MOW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1MOW entry

There are 12 chains in PDB entry 1MOW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	C 301	G 323
C	C 401	G 423
E	C 801	G 823
F	C 901	G 923
H	C 1301	G 1323
I	C 1401	G 1423
K	C 1801	G 1823
L	C 1901	G 1923
A	GLU 5	LEU 252
D	GLU 505	LEU 752
G	VAL 1007	ASP 1250
J	ASN 1506	LEU 1752

There are 49 helices in PDB entry 1MOW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	6	21	Right-handed alpha
Helix 2	2	A	44	64	Right-handed alpha
Helix 3	3	A	84	95	Right-handed alpha
Helix 4	4	A	96	101	Right-handed 310
Helix 5	5	A	102	117	Right-handed alpha
Helix 6	6	A	148	160	Right-handed alpha
Helix 7	7	A	177	189	Right-handed alpha
Helix 8	8	A	190	192	Right-handed 310
Helix 9	9	A	195	213	Right-handed alpha
Helix 10	10	A	215	233	Right-handed alpha
Helix 11	11	A	241	252	Right-handed alpha
Helix 12	12	D	506	521	Right-handed alpha
Helix 13	13	D	544	564	Right-handed alpha
Helix 14	14	D	584	595	Right-handed alpha
Helix 15	15	D	596	601	Right-handed 310
Helix 16	16	D	602	617	Right-handed alpha
Helix 17	17	D	648	660	Right-handed alpha
Helix 18	18	D	677	689	Right-handed alpha
Helix 19	19	D	690	692	Right-handed 310
Helix 20	20	D	695	713	Right-handed alpha
Helix 21	21	D	715	733	Right-handed alpha
Helix 22	22	D	741	751	Right-handed alpha
Helix 23	23	G	1008	1021	Right-handed alpha
Helix 24	24	G	1045	1051	Right-handed alpha
Helix 25	25	G	1051	1063	Right-handed alpha
Helix 26	26	G	1084	1097	Right-handed alpha
Helix 27	27	G	1103	1117	Right-handed alpha
Helix 28	28	G	1146	1150	Right-handed 310
Helix 29	29	G	1155	1160	Right-handed alpha
Helix 30	30	G	1177	1187	Right-handed alpha
Helix 31	31	G	1188	1192	Right-handed 310
Helix 32	32	G	1195	1207	Right-handed alpha
Helix 33	33	G	1215	1233	Right-handed alpha
Helix 34	34	G	1241	1250	Right-handed alpha
Helix 35	35	J	1506	1521	Right-handed alpha
Helix 36	36	J	1544	1551	Right-handed alpha
Helix 37	37	J	1553	1563	Right-handed alpha
Helix 38	38	J	1584	1598	Right-handed alpha
Helix 39	39	J	1599	1601	Right-handed 310
Helix 40	40	J	1602	1602	Right-handed 310
Helix 41	41	J	1603	1617	Right-handed alpha
Helix 42	42	J	1677	1689	Right-handed alpha
Helix 43	43	J	1690	1692	Right-handed 310
Helix 44	44	J	1693	1694	Right-handed 310
Helix 45	45	J	1695	1709	Right-handed alpha
Helix 46	46	J	1710	1710	Right-handed 310
Helix 47	47	J	1712	1714	Right-handed 310
Helix 48	48	J	1715	1733	Right-handed alpha
Helix 49	49	J	1741	1752	Right-handed alpha

There are 9 sheets in PDB entry 1MOW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	22	29	first strand
Strand 2	A	33	42	anti-parallel
Strand 3	A	78	83	anti-parallel
Strand 4	A	69	73	anti-parallel

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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	118	126	first strand
Strand 2	A	134	145	anti-parallel
Strand 3	A	170	175	anti-parallel
Strand 4	A	163	167	anti-parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	522	529	first strand
Strand 2	D	533	542	anti-parallel
Strand 3	D	578	583	anti-parallel
Strand 4	D	569	573	anti-parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	618	626	first strand
Strand 2	D	634	645	anti-parallel
Strand 3	D	670	675	anti-parallel
Strand 4	D	663	666	anti-parallel

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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	1022	1027	first strand
Strand 2	G	1035	1042	anti-parallel
Strand 3	G	1078	1083	anti-parallel
Strand 4	G	1069	1073	anti-parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	1118	1126	first strand
Strand 2	G	1134	1144	anti-parallel
Strand 3	G	1171	1175	anti-parallel
Strand 4	G	1163	1165	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1524	1527	first strand
Strand 2	J	1535	1538	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1569	1572	first strand
Strand 2	J	1579	1582	anti-parallel

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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1618	1626	first strand
Strand 2	J	1634	1644	anti-parallel
Strand 3	J	1670	1674	anti-parallel
Strand 4	J	1663	1667	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1MOW

Analysis of interatomic Contacts of Structural Units in PDB entry:
1MOW