Analysis of interatomic Contacts of Structural Units in PDB entry:
1MV9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MV9 entry

There are 2 chains in PDB entry 1MV9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 229GLN 460
B
LYS 471ASP 481
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 1MV9. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
231 243Right-handed alpha
Helix 2
2
A
263 286Right-handed alpha
Helix 3
3
A
288 292Right-handed 310
Helix 4
4
A
293 317Right-handed alpha
Helix 5
5
A
334 340Right-handed alpha
Helix 6
6
A
342 353Right-handed alpha
Helix 7
7
A
353 361Right-handed alpha
Helix 8
8
A
363 376Right-handed alpha
Helix 9
9
A
385 408Right-handed alpha
Helix 10
10
A
413 420Right-handed alpha
Helix 11
11
A
421 443Right-handed alpha
Helix 12
12
A
448 455Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1MV9.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
323 325first strand
Strand 2
A
331 333anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il