Analysis of interatomic Contacts of Structural Units in PDB entry:
1NUH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1NUH entry

There is 1 chain in PDB entry 1NUH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 1ARG 555
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 1NUH. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
1 6Right-handed alpha
Helix 2
2
A
6 20Right-handed alpha
Helix 3
3
A
21 23Right-handed 310
Helix 4
4
A
24 31Right-handed alpha
Helix 5
5
A
34 39Right-handed alpha
Helix 6
6
A
60 74Right-handed alpha
Helix 7
7
A
75 86Right-handed alpha
Helix 8
8
A
98 103Right-handed alpha
Helix 9
9
A
117 138Right-handed alpha
Helix 10
10
A
156 159Right-handed 310
Helix 11
11
A
160 170Right-handed alpha
Helix 12
12
A
171 174Right-handed 310
Helix 13
13
A
187 196Right-handed alpha
Helix 14
14
A
197 198Right-handed 310
Helix 15
15
A
199 201Right-handed 310
Helix 16
16
A
214 233Right-handed alpha
Helix 17
17
A
234 236Right-handed 310
Helix 18
18
A
237 241Right-handed alpha
Helix 19
19
A
248 256Right-handed alpha
Helix 20
20
A
258 260Right-handed 310
Helix 21
21
A
270 274Right-handed 310
Helix 22
22
A
277 279Right-handed 310
Helix 23
23
A
280 288Right-handed alpha
Helix 24
24
A
288 309Right-handed alpha
Helix 25
25
A
310 313Right-handed 310
Helix 26
26
A
314 329Right-handed alpha
Helix 27
27
A
341 345Right-handed 310
Helix 28
28
A
346 360Right-handed alpha
Helix 29
29
A
384 389Right-handed 310
Helix 30
30
A
390 397Right-handed alpha
Helix 31
31
A
415 417Right-handed 310
Helix 32
32
A
418 438Right-handed alpha
Helix 33
33
A
440 451Right-handed alpha
Helix 34
34
A
454 462Right-handed alpha
Helix 35
35
A
463 466Right-handed 310
Helix 36
36
A
482 504Right-handed alpha
Helix 37
37
A
511 518Right-handed alpha
Helix 38
38
A
519 522Right-handed 310
Helix 39
39
A
523 529Right-handed alpha
Helix 40
40
A
538 553Right-handed alpha
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There are 3 sheets in PDB entry 1NUH. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
40 44first strand
Strand 2
A
49 53anti-parallel
Strand 3
A
473 480anti-parallel
Strand 4
A
403 410parallel
Strand 5
A
334 339parallel
Strand 6
A
377 379parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
111 112first strand
Strand 2
A
115 116anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
179 183first strand
Strand 2
A
150 154parallel
Strand 3
A
203 208parallel
Strand 4
A
242 246parallel
Strand 5
A
262 264parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il