Analysis of interatomic Contacts of Structural Units in PDB entry:
1OVC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OVC entry

There is 1 chain in PDB entry 1OVC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1PHE 295
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 1OVC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 41Right-handed alpha
Helix 2
2
A
69 77Right-handed alpha
Helix 3
3
A
78 81Right-handed 310
Helix 4
4
A
82 103Right-handed alpha
Helix 5
5
A
111 113Right-handed 310
Helix 6
6
A
149 153Right-handed 310
Helix 7
7
A
154 161Right-handed alpha
Helix 8
8
A
164 181Right-handed alpha
Helix 9
9
A
194 202Right-handed alpha
Helix 10
10
A
212 223Right-handed alpha
Helix 11
11
A
232 246Right-handed alpha
Helix 12
12
A
246 251Right-handed alpha
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There are 4 sheets in PDB entry 1OVC. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
12 17anti-parallel
Strand 3
A
58 63anti-parallel
Strand 4
A
49 54anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 106first strand
Strand 2
A
132 133anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 119first strand
Strand 2
A
122 125anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 142first strand
Strand 2
A
162 163anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il